Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AC023813.4-201ENST00000607580 580 ntBASIC4.41□□□□□ -1.7
SHFQ7M4L6 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.41□□□□□ -1.7
SHFQ7M4L6 AL450489.1-201ENST00000612071 468 ntBASIC4.41□□□□□ -1.7
SHFQ7M4L6 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.41□□□□□ -1.7
SHFQ7M4L6 AL049794.2-201ENST00000616301 365 ntBASIC4.41□□□□□ -1.7
SHFQ7M4L6 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC4.41□□□□□ -1.7
SHFQ7M4L6 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC4.41□□□□□ -1.7
SHFQ7M4L6 AC131159.1-201ENST00000621854 213 ntBASIC4.41□□□□□ -1.7
SHFQ7M4L6 AC078883.4-201ENST00000623218 367 ntBASIC4.41□□□□□ -1.7
SHFQ7M4L6 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.41□□□□□ -1.7
SHFQ7M4L6 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SHFQ7M4L6 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SHFQ7M4L6 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
SHFQ7M4L6 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.41□□□□□ -1.7
SHFQ7M4L6 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
SHFQ7M4L6 LINC02085-201ENST00000465215 2051 ntTSL 2 BASIC4.41□□□□□ -1.7
SHFQ7M4L6 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
SHFQ7M4L6 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC4.41□□□□□ -1.7
SHFQ7M4L6 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
SHFQ7M4L6 ECM1P2-201ENST00000503354 1577 ntBASIC4.4□□□□□ -1.7
SHFQ7M4L6 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC4.4□□□□□ -1.7
SHFQ7M4L6 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.7
SHFQ7M4L6 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
SHFQ7M4L6 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
SHFQ7M4L6 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
SHFQ7M4L6 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
SHFQ7M4L6 KLHL13-203ENST00000371878 3234 ntTSL 2 BASIC4.4□□□□□ -1.71
SHFQ7M4L6 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.4□□□□□ -1.71
SHFQ7M4L6 IL6STP1-201ENST00000346911 1020 ntBASIC4.4□□□□□ -1.71
SHFQ7M4L6 Y_RNA.169-201ENST00000363745 96 ntBASIC4.4□□□□□ -1.71
SHFQ7M4L6 RNU6-304P-201ENST00000364855 107 ntBASIC4.4□□□□□ -1.71
SHFQ7M4L6 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.4□□□□□ -1.71
SHFQ7M4L6 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
SHFQ7M4L6 SNORD116-2-201ENST00000384274 95 ntBASIC4.4□□□□□ -1.71
SHFQ7M4L6 Y_RNA.465-201ENST00000384293 102 ntBASIC4.4□□□□□ -1.71
SHFQ7M4L6 SNORD116-8-201ENST00000384365 95 ntBASIC4.4□□□□□ -1.71
SHFQ7M4L6 SNORD116-6-201ENST00000384711 96 ntBASIC4.4□□□□□ -1.71
SHFQ7M4L6 AP000580.1-201ENST00000404439 358 ntBASIC4.4□□□□□ -1.71
SHFQ7M4L6 ZSCAN12P1-201ENST00000406489 419 ntBASIC4.4□□□□□ -1.71
SHFQ7M4L6 AL512422.1-201ENST00000407033 553 ntBASIC4.4□□□□□ -1.71
SHFQ7M4L6 RN7SKP126-201ENST00000411143 300 ntBASIC4.4□□□□□ -1.71
SHFQ7M4L6 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC4.4□□□□□ -1.71
SHFQ7M4L6 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC4.4□□□□□ -1.71
SHFQ7M4L6 AC007435.1-201ENST00000421086 415 ntBASIC4.4□□□□□ -1.71
SHFQ7M4L6 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.4□□□□□ -1.71
SHFQ7M4L6 USP9YP11-201ENST00000427537 717 ntBASIC4.4□□□□□ -1.71
SHFQ7M4L6 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.4□□□□□ -1.71
SHFQ7M4L6 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.4□□□□□ -1.71
SHFQ7M4L6 RPL23AP76-201ENST00000441860 458 ntBASIC4.4□□□□□ -1.71
SHFQ7M4L6 OR7E125P-201ENST00000443450 846 ntBASIC4.4□□□□□ -1.71
SHFQ7M4L6 AL442224.1-201ENST00000443771 391 ntTSL 2 BASIC4.4□□□□□ -1.71
SHFQ7M4L6 MYO5BP2-201ENST00000449815 1277 ntBASIC4.4□□□□□ -1.71
SHFQ7M4L6 ART2BP-201ENST00000453501 499 ntBASIC4.4□□□□□ -1.71
SHFQ7M4L6 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.4□□□□□ -1.71
SHFQ7M4L6 AC010894.4-201ENST00000454203 457 ntTSL 3 BASIC4.4□□□□□ -1.71
SHFQ7M4L6 AC117394.1-201ENST00000477323 567 ntBASIC4.4□□□□□ -1.71
SHFQ7M4L6 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.4□□□□□ -1.71
SHFQ7M4L6 RPS27P23-201ENST00000487608 251 ntBASIC4.4□□□□□ -1.71
SHFQ7M4L6 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC4.4□□□□□ -1.71
SHFQ7M4L6 AC104971.1-201ENST00000495117 578 ntBASIC4.4□□□□□ -1.71
SHFQ7M4L6 RPS4XP18-201ENST00000495480 763 ntBASIC4.4□□□□□ -1.71
SHFQ7M4L6 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SHFQ7M4L6 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC4.4□□□□□ -1.71
SHFQ7M4L6 AC008837.2-201ENST00000513076 418 ntBASIC4.4□□□□□ -1.71
SHFQ7M4L6 TBCA-203ENST00000517679 545 ntTSL 3 BASIC4.4□□□□□ -1.71
SHFQ7M4L6 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.4□□□□□ -1.71
SHFQ7M4L6 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
SHFQ7M4L6 AC008562.1-201ENST00000521763 330 ntBASIC4.4□□□□□ -1.71
SHFQ7M4L6 C1GALT1P3-201ENST00000522049 819 ntBASIC4.4□□□□□ -1.71
SHFQ7M4L6 MAL2-208ENST00000523307 556 ntTSL 4 BASIC4.4□□□□□ -1.71
SHFQ7M4L6 AC008641.1-201ENST00000523781 248 ntTSL 3 BASIC4.4□□□□□ -1.71
SHFQ7M4L6 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC4.4□□□□□ -1.71
SHFQ7M4L6 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.4□□□□□ -1.71
SHFQ7M4L6 AP003557.1-201ENST00000531715 585 ntTSL 3 BASIC4.4□□□□□ -1.71
SHFQ7M4L6 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC4.4□□□□□ -1.71
SHFQ7M4L6 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC4.4□□□□□ -1.71
SHFQ7M4L6 ERP27-202ENST00000540097 993 ntTSL 2 BASIC4.4□□□□□ -1.71
SHFQ7M4L6 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.4□□□□□ -1.71
SHFQ7M4L6 NBEAP1-201ENST00000554452 979 ntBASIC4.4□□□□□ -1.71
SHFQ7M4L6 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC4.4□□□□□ -1.71
SHFQ7M4L6 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC4.4□□□□□ -1.71
SHFQ7M4L6 AC022916.4-201ENST00000585646 475 ntTSL 3 BASIC4.4□□□□□ -1.71
SHFQ7M4L6 AC004223.2-201ENST00000590309 544 ntBASIC4.4□□□□□ -1.71
SHFQ7M4L6 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.4□□□□□ -1.71
SHFQ7M4L6 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC4.4□□□□□ -1.71
SHFQ7M4L6 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
SHFQ7M4L6 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC4.4□□□□□ -1.71
SHFQ7M4L6 AC243654.2-201ENST00000612843 443 ntBASIC4.4□□□□□ -1.71
SHFQ7M4L6 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.4□□□□□ -1.71
SHFQ7M4L6 AC004777.1-201ENST00000624317 287 ntBASIC4.4□□□□□ -1.71
SHFQ7M4L6 AF001550.2-201ENST00000636643 217 ntBASIC4.4□□□□□ -1.71
SHFQ7M4L6 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.4□□□□□ -1.71
SHFQ7M4L6 AL359922.3-201ENST00000624779 1670 ntBASIC4.4□□□□□ -1.71
SHFQ7M4L6 ASNSP1-204ENST00000641977 1664 ntBASIC4.4□□□□□ -1.71
SHFQ7M4L6 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.4□□□□□ -1.71
SHFQ7M4L6 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
SHFQ7M4L6 DCAF13P3-201ENST00000561147 1334 ntBASIC4.4□□□□□ -1.71
SHFQ7M4L6 AL355852.1-201ENST00000454081 1771 ntBASIC4.4□□□□□ -1.71
SHFQ7M4L6 PRUNE2-208ENST00000443509 12356 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
SHFQ7M4L6 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 78 ms