Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 RSL24D1P4-201ENST00000400938 484 ntBASIC4.67□□□□□ -1.66
ZNF549Q6P9A3 RNU4-74P-201ENST00000411280 161 ntBASIC4.67□□□□□ -1.66
ZNF549Q6P9A3 AC000123.1-201ENST00000418215 516 ntTSL 5 BASIC4.67□□□□□ -1.66
ZNF549Q6P9A3 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.67□□□□□ -1.66
ZNF549Q6P9A3 SLC9B1P4-201ENST00000421957 1288 ntBASIC4.67□□□□□ -1.66
ZNF549Q6P9A3 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
ZNF549Q6P9A3 AC011233.1-201ENST00000422812 283 ntBASIC4.67□□□□□ -1.66
ZNF549Q6P9A3 FABP7P1-201ENST00000424004 391 ntBASIC4.67□□□□□ -1.66
ZNF549Q6P9A3 C1DP1-201ENST00000426049 402 ntBASIC4.67□□□□□ -1.66
ZNF549Q6P9A3 HSPE1P16-201ENST00000426640 348 ntBASIC4.67□□□□□ -1.66
ZNF549Q6P9A3 AP000477.1-202ENST00000434859 847 ntTSL 3 BASIC4.67□□□□□ -1.66
ZNF549Q6P9A3 RPS26P2-201ENST00000440331 348 ntBASIC4.67□□□□□ -1.66
ZNF549Q6P9A3 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC4.67□□□□□ -1.66
ZNF549Q6P9A3 FGF7P5-201ENST00000441829 291 ntBASIC4.67□□□□□ -1.66
ZNF549Q6P9A3 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC4.67□□□□□ -1.66
ZNF549Q6P9A3 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC4.67□□□□□ -1.66
ZNF549Q6P9A3 MTND2P19-201ENST00000449129 1012 ntBASIC4.67□□□□□ -1.66
ZNF549Q6P9A3 LINC01691-201ENST00000450546 426 ntTSL 5 BASIC4.67□□□□□ -1.66
ZNF549Q6P9A3 HMGB1P5-202ENST00000451497 985 ntBASIC4.67□□□□□ -1.66
ZNF549Q6P9A3 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC4.67□□□□□ -1.66
ZNF549Q6P9A3 MTCO2P18-201ENST00000457151 658 ntBASIC4.67□□□□□ -1.66
ZNF549Q6P9A3 MTND3P7-201ENST00000474435 343 ntBASIC4.67□□□□□ -1.66
ZNF549Q6P9A3 RPL7P16-201ENST00000479738 738 ntBASIC4.67□□□□□ -1.66
ZNF549Q6P9A3 RN7SL346P-201ENST00000491561 294 ntBASIC4.67□□□□□ -1.66
ZNF549Q6P9A3 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.67□□□□□ -1.66
ZNF549Q6P9A3 RNU1-6P-201ENST00000516290 144 ntBASIC4.67□□□□□ -1.66
ZNF549Q6P9A3 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
ZNF549Q6P9A3 TEX12-202ENST00000530752 787 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
ZNF549Q6P9A3 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
ZNF549Q6P9A3 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.67□□□□□ -1.66
ZNF549Q6P9A3 AL121839.1-201ENST00000556233 1185 ntBASIC4.67□□□□□ -1.66
ZNF549Q6P9A3 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.67□□□□□ -1.66
ZNF549Q6P9A3 AC105129.1-201ENST00000560250 297 ntBASIC4.67□□□□□ -1.66
ZNF549Q6P9A3 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.67□□□□□ -1.66
ZNF549Q6P9A3 AC090695.1-201ENST00000561269 1222 ntBASIC4.67□□□□□ -1.66
ZNF549Q6P9A3 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC4.67□□□□□ -1.66
ZNF549Q6P9A3 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC4.67□□□□□ -1.66
ZNF549Q6P9A3 AC209154.1-201ENST00000582156 337 ntBASIC4.67□□□□□ -1.66
ZNF549Q6P9A3 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC4.67□□□□□ -1.66
ZNF549Q6P9A3 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC4.67□□□□□ -1.66
ZNF549Q6P9A3 BMS1P7-201ENST00000602440 1052 ntBASIC4.67□□□□□ -1.66
ZNF549Q6P9A3 MRPS35P3-201ENST00000603189 709 ntBASIC4.67□□□□□ -1.66
ZNF549Q6P9A3 AC025175.1-201ENST00000606482 759 ntBASIC4.67□□□□□ -1.66
ZNF549Q6P9A3 OR2AS2P-201ENST00000606902 342 ntBASIC4.67□□□□□ -1.66
ZNF549Q6P9A3 AL353600.1-201ENST00000608148 251 ntBASIC4.67□□□□□ -1.66
ZNF549Q6P9A3 SNORD91B-202ENST00000608459 222 ntBASIC4.67□□□□□ -1.66
ZNF549Q6P9A3 AC009237.15-201ENST00000610252 501 ntBASIC4.67□□□□□ -1.66
ZNF549Q6P9A3 AC022306.2-201ENST00000617563 647 ntBASIC4.67□□□□□ -1.66
ZNF549Q6P9A3 AC091965.5-201ENST00000624785 342 ntBASIC4.67□□□□□ -1.66
ZNF549Q6P9A3 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
ZNF549Q6P9A3 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.67□□□□□ -1.66
ZNF549Q6P9A3 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
ZNF549Q6P9A3 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
ZNF549Q6P9A3 BX005019.1-201ENST00000561881 1810 ntBASIC4.67□□□□□ -1.66
ZNF549Q6P9A3 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.67□□□□□ -1.66
ZNF549Q6P9A3 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.67□□□□□ -1.66
ZNF549Q6P9A3 RAB23-201ENST00000317483 2546 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
ZNF549Q6P9A3 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
ZNF549Q6P9A3 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
ZNF549Q6P9A3 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
ZNF549Q6P9A3 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
ZNF549Q6P9A3 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
ZNF549Q6P9A3 AL031320.2-201ENST00000591892 2079 ntTSL 5 BASIC4.66□□□□□ -1.66
ZNF549Q6P9A3 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
ZNF549Q6P9A3 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
ZNF549Q6P9A3 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.66□□□□□ -1.66
ZNF549Q6P9A3 OR10AG1-201ENST00000312345 1016 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
ZNF549Q6P9A3 ANKRD36P1-201ENST00000344424 659 ntBASIC4.66□□□□□ -1.66
ZNF549Q6P9A3 SNORD116.1-201ENST00000365628 92 ntBASIC4.66□□□□□ -1.66
ZNF549Q6P9A3 CARD16-202ENST00000375706 686 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
ZNF549Q6P9A3 RNU5A-2P-201ENST00000384337 116 ntBASIC4.66□□□□□ -1.66
ZNF549Q6P9A3 Y_RNA.578-201ENST00000390903 88 ntBASIC4.66□□□□□ -1.66
ZNF549Q6P9A3 AL589647.1-201ENST00000402485 466 ntBASIC4.66□□□□□ -1.66
ZNF549Q6P9A3 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.66□□□□□ -1.66
ZNF549Q6P9A3 RNU6-648P-201ENST00000410190 107 ntBASIC4.66□□□□□ -1.66
ZNF549Q6P9A3 SETP15-201ENST00000412724 337 ntBASIC4.66□□□□□ -1.66
ZNF549Q6P9A3 TEX41-202ENST00000414256 604 ntTSL 5 BASIC4.66□□□□□ -1.66
ZNF549Q6P9A3 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC4.66□□□□□ -1.66
ZNF549Q6P9A3 COX6B1P1-201ENST00000415962 213 ntBASIC4.66□□□□□ -1.66
ZNF549Q6P9A3 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.66□□□□□ -1.66
ZNF549Q6P9A3 AC023128.2-201ENST00000420880 1223 ntBASIC4.66□□□□□ -1.66
ZNF549Q6P9A3 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC4.66□□□□□ -1.66
ZNF549Q6P9A3 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC4.66□□□□□ -1.66
ZNF549Q6P9A3 AL035407.1-201ENST00000429211 571 ntBASIC4.66□□□□□ -1.66
ZNF549Q6P9A3 UBE2D3P4-201ENST00000441973 436 ntBASIC4.66□□□□□ -1.66
ZNF549Q6P9A3 HMGB3P6-201ENST00000444896 598 ntBASIC4.66□□□□□ -1.66
ZNF549Q6P9A3 RPL34P26-201ENST00000445636 354 ntBASIC4.66□□□□□ -1.66
ZNF549Q6P9A3 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.66□□□□□ -1.66
ZNF549Q6P9A3 AC104978.1-201ENST00000449387 391 ntBASIC4.66□□□□□ -1.66
ZNF549Q6P9A3 AC108463.1-201ENST00000450258 347 ntBASIC4.66□□□□□ -1.66
ZNF549Q6P9A3 ATP5A1P7-201ENST00000453978 1279 ntBASIC4.66□□□□□ -1.66
ZNF549Q6P9A3 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC4.66□□□□□ -1.66
ZNF549Q6P9A3 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC4.66□□□□□ -1.66
ZNF549Q6P9A3 RPL23AP37-201ENST00000479658 549 ntBASIC4.66□□□□□ -1.66
ZNF549Q6P9A3 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC4.66□□□□□ -1.66
ZNF549Q6P9A3 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC4.66□□□□□ -1.66
ZNF549Q6P9A3 AC093890.1-201ENST00000502554 540 ntBASIC4.66□□□□□ -1.66
ZNF549Q6P9A3 RPF2P2-201ENST00000504693 896 ntBASIC4.66□□□□□ -1.66
ZNF549Q6P9A3 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC4.66□□□□□ -1.66
ZNF549Q6P9A3 AC010625.1-201ENST00000511296 403 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 78.7 ms