Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 EEF1A1P39-201ENST00000440791 250 ntBASIC4.4□□□□□ -1.71
CLDN20P56880 AL591719.1-201ENST00000444669 744 ntBASIC4.4□□□□□ -1.71
CLDN20P56880 AC000111.2-201ENST00000448200 210 ntBASIC4.4□□□□□ -1.71
CLDN20P56880 AC010733.1-201ENST00000451515 401 ntBASIC4.4□□□□□ -1.71
CLDN20P56880 AC243772.1-201ENST00000451620 410 ntBASIC4.4□□□□□ -1.71
CLDN20P56880 AC234781.3-201ENST00000452540 973 ntBASIC4.4□□□□□ -1.71
CLDN20P56880 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC4.4□□□□□ -1.71
CLDN20P56880 AL354710.1-201ENST00000453641 246 ntBASIC4.4□□□□□ -1.71
CLDN20P56880 AC091685.2-201ENST00000454924 864 ntBASIC4.4□□□□□ -1.71
CLDN20P56880 RNU6-1218P-201ENST00000458990 108 ntBASIC4.4□□□□□ -1.71
CLDN20P56880 AC092324.1-201ENST00000468671 324 ntBASIC4.4□□□□□ -1.71
CLDN20P56880 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.4□□□□□ -1.71
CLDN20P56880 RN7SL817P-201ENST00000480777 288 ntBASIC4.4□□□□□ -1.71
CLDN20P56880 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC4.4□□□□□ -1.71
CLDN20P56880 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC4.4□□□□□ -1.71
CLDN20P56880 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CLDN20P56880 AC098799.3-201ENST00000506095 438 ntBASIC4.4□□□□□ -1.71
CLDN20P56880 CSN1S1-203ENST00000507763 597 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
CLDN20P56880 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC4.4□□□□□ -1.71
CLDN20P56880 IGJP1-201ENST00000522682 475 ntBASIC4.4□□□□□ -1.71
CLDN20P56880 OPRM1-223ENST00000524163 1251 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CLDN20P56880 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.4□□□□□ -1.71
CLDN20P56880 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC4.4□□□□□ -1.71
CLDN20P56880 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.4□□□□□ -1.71
CLDN20P56880 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC4.4□□□□□ -1.71
CLDN20P56880 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CLDN20P56880 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC4.4□□□□□ -1.71
CLDN20P56880 BGLT3-201ENST00000564523 994 ntBASIC4.4□□□□□ -1.71
CLDN20P56880 AC022166.2-201ENST00000566030 536 ntTSL 4 BASIC4.4□□□□□ -1.71
CLDN20P56880 AC090751.1-201ENST00000566966 267 ntBASIC4.4□□□□□ -1.71
CLDN20P56880 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.4□□□□□ -1.71
CLDN20P56880 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC4.4□□□□□ -1.71
CLDN20P56880 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CLDN20P56880 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC4.4□□□□□ -1.71
CLDN20P56880 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC4.4□□□□□ -1.71
CLDN20P56880 AC113368.1-201ENST00000603736 382 ntBASIC4.4□□□□□ -1.71
CLDN20P56880 AC002487.1-201ENST00000604565 994 ntBASIC4.4□□□□□ -1.71
CLDN20P56880 AL583856.2-201ENST00000606298 543 ntBASIC4.4□□□□□ -1.71
CLDN20P56880 AL022401.1-201ENST00000619498 108 ntBASIC4.4□□□□□ -1.71
CLDN20P56880 UGP2-231ENST00000627474 264 ntTSL 5 BASIC4.4□□□□□ -1.71
CLDN20P56880 AC097655.1-201ENST00000635075 318 ntBASIC4.4□□□□□ -1.71
CLDN20P56880 AC009313.2-201ENST00000417893 1941 ntBASIC4.4□□□□□ -1.71
CLDN20P56880 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
CLDN20P56880 AC092435.4-201ENST00000623012 4159 ntBASIC4.4□□□□□ -1.71
CLDN20P56880 MAPK10-320ENST00000641462 6696 ntBASIC4.4□□□□□ -1.71
CLDN20P56880 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CLDN20P56880 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
CLDN20P56880 IQGAP2-204ENST00000502745 3404 ntTSL 2 BASIC4.4□□□□□ -1.71
CLDN20P56880 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
CLDN20P56880 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
CLDN20P56880 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.4□□□□□ -1.71
CLDN20P56880 USP8-204ENST00000425032 3559 ntTSL 2 BASIC4.39□□□□□ -1.71
CLDN20P56880 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.39□□□□□ -1.71
CLDN20P56880 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
CLDN20P56880 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
CLDN20P56880 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.39□□□□□ -1.71
CLDN20P56880 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.39□□□□□ -1.71
CLDN20P56880 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
CLDN20P56880 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.39□□□□□ -1.71
CLDN20P56880 MIR513B-201ENST00000385136 84 ntBASIC4.39□□□□□ -1.71
CLDN20P56880 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CLDN20P56880 VDAC2P1-201ENST00000399358 958 ntBASIC4.39□□□□□ -1.71
CLDN20P56880 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
CLDN20P56880 AL139128.1-201ENST00000413921 941 ntBASIC4.39□□□□□ -1.71
CLDN20P56880 Z75741.2-201ENST00000417272 1167 ntBASIC4.39□□□□□ -1.71
CLDN20P56880 AC004074.1-201ENST00000421810 1063 ntBASIC4.39□□□□□ -1.71
CLDN20P56880 LINC00266-4P-201ENST00000427373 842 ntTSL 3 BASIC4.39□□□□□ -1.71
CLDN20P56880 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC4.39□□□□□ -1.71
CLDN20P56880 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC4.39□□□□□ -1.71
CLDN20P56880 AL049745.1-201ENST00000433953 286 ntBASIC4.39□□□□□ -1.71
CLDN20P56880 AC084290.1-201ENST00000434995 374 ntBASIC4.39□□□□□ -1.71
CLDN20P56880 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC4.39□□□□□ -1.71
CLDN20P56880 AC006466.1-201ENST00000438721 289 ntBASIC4.39□□□□□ -1.71
CLDN20P56880 AC092809.1-201ENST00000441469 474 ntBASIC4.39□□□□□ -1.71
CLDN20P56880 MRPL48P1-201ENST00000445390 636 ntBASIC4.39□□□□□ -1.71
CLDN20P56880 YWHAQP9-201ENST00000445891 512 ntBASIC4.39□□□□□ -1.71
CLDN20P56880 SLC25A18P1-201ENST00000449385 454 ntBASIC4.39□□□□□ -1.71
CLDN20P56880 TPMTP4-201ENST00000450749 678 ntBASIC4.39□□□□□ -1.71
CLDN20P56880 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC4.39□□□□□ -1.71
CLDN20P56880 NPM1P13-201ENST00000452663 865 ntBASIC4.39□□□□□ -1.71
CLDN20P56880 HCG17-214ENST00000453558 732 ntTSL 5 BASIC4.39□□□□□ -1.71
CLDN20P56880 RPL23AP71-201ENST00000470966 469 ntBASIC4.39□□□□□ -1.71
CLDN20P56880 AC068587.2-201ENST00000478386 781 ntBASIC4.39□□□□□ -1.71
CLDN20P56880 RPL23AP44-201ENST00000482216 473 ntBASIC4.39□□□□□ -1.71
CLDN20P56880 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CLDN20P56880 IGLV2-34-201ENST00000490007 283 ntBASIC4.39□□□□□ -1.71
CLDN20P56880 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC4.39□□□□□ -1.71
CLDN20P56880 EEF1A1P25-201ENST00000495704 1267 ntBASIC4.39□□□□□ -1.71
CLDN20P56880 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CLDN20P56880 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
CLDN20P56880 AC112673.1-201ENST00000513168 575 ntBASIC4.39□□□□□ -1.71
CLDN20P56880 OR7H2P-201ENST00000513483 306 ntBASIC4.39□□□□□ -1.71
CLDN20P56880 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.39□□□□□ -1.71
CLDN20P56880 COX6B1P6-201ENST00000522347 255 ntBASIC4.39□□□□□ -1.71
CLDN20P56880 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.39□□□□□ -1.71
CLDN20P56880 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC4.39□□□□□ -1.71
CLDN20P56880 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC4.39□□□□□ -1.71
CLDN20P56880 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC4.39□□□□□ -1.71
CLDN20P56880 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.39□□□□□ -1.71
CLDN20P56880 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC4.39□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms