Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC4.94□□□□□ -1.62
HDAC4P56524 SMARCE1P4-201ENST00000523647 241 ntBASIC4.94□□□□□ -1.62
HDAC4P56524 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC4.94□□□□□ -1.62
HDAC4P56524 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC4.94□□□□□ -1.62
HDAC4P56524 BRD9P1-201ENST00000529855 560 ntBASIC4.94□□□□□ -1.62
HDAC4P56524 AP005436.3-201ENST00000532849 572 ntTSL 5 BASIC4.94□□□□□ -1.62
HDAC4P56524 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC4.94□□□□□ -1.62
HDAC4P56524 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.94□□□□□ -1.62
HDAC4P56524 AL133485.1-201ENST00000555966 392 ntTSL 2 BASIC4.94□□□□□ -1.62
HDAC4P56524 AL110505.1-201ENST00000557062 522 ntTSL 3 BASIC4.94□□□□□ -1.62
HDAC4P56524 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC4.94□□□□□ -1.62
HDAC4P56524 AC105129.1-201ENST00000560250 297 ntBASIC4.94□□□□□ -1.62
HDAC4P56524 MTATP6P24-201ENST00000576835 677 ntBASIC4.94□□□□□ -1.62
HDAC4P56524 MIR3934-201ENST00000579806 107 ntBASIC4.94□□□□□ -1.62
HDAC4P56524 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.94□□□□□ -1.62
HDAC4P56524 MIR4737-201ENST00000583979 81 ntBASIC4.94□□□□□ -1.62
HDAC4P56524 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC4.94□□□□□ -1.62
HDAC4P56524 VN1R87P-201ENST00000596706 487 ntBASIC4.94□□□□□ -1.62
HDAC4P56524 AC005084.1-201ENST00000605160 304 ntBASIC4.94□□□□□ -1.62
HDAC4P56524 AC112220.2-201ENST00000605513 533 ntBASIC4.94□□□□□ -1.62
HDAC4P56524 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HDAC4P56524 AC097520.1-201ENST00000624435 385 ntBASIC4.94□□□□□ -1.62
HDAC4P56524 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HDAC4P56524 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.94□□□□□ -1.62
HDAC4P56524 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.94□□□□□ -1.62
HDAC4P56524 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.94□□□□□ -1.62
HDAC4P56524 ENPP3-201ENST00000357639 3162 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
HDAC4P56524 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC4.93□□□□□ -1.62
HDAC4P56524 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
HDAC4P56524 AL365214.2-201ENST00000433684 1365 ntTSL 2 BASIC4.93□□□□□ -1.62
HDAC4P56524 SLC26A7-209ENST00000617078 5094 ntTSL 5 BASIC4.93□□□□□ -1.62
HDAC4P56524 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HDAC4P56524 AL603865.2-201ENST00000401679 213 ntBASIC4.93□□□□□ -1.62
HDAC4P56524 DNAJC19P6-201ENST00000401853 280 ntBASIC4.93□□□□□ -1.62
HDAC4P56524 RPS3AP25-201ENST00000411660 793 ntBASIC4.93□□□□□ -1.62
HDAC4P56524 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.93□□□□□ -1.62
HDAC4P56524 AC245028.1-201ENST00000423259 256 ntBASIC4.93□□□□□ -1.62
HDAC4P56524 MTATP6P17-201ENST00000431030 672 ntBASIC4.93□□□□□ -1.62
HDAC4P56524 AC008072.1-201ENST00000434254 824 ntBASIC4.93□□□□□ -1.62
HDAC4P56524 RPL12P46-201ENST00000436610 195 ntBASIC4.93□□□□□ -1.62
HDAC4P56524 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC4.93□□□□□ -1.62
HDAC4P56524 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC4.93□□□□□ -1.62
HDAC4P56524 MTCO1P53-201ENST00000441633 699 ntBASIC4.93□□□□□ -1.62
HDAC4P56524 GEMIN8P3-201ENST00000445417 720 ntBASIC4.93□□□□□ -1.62
HDAC4P56524 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC4.93□□□□□ -1.62
HDAC4P56524 SEPT14P24-201ENST00000447236 180 ntBASIC4.93□□□□□ -1.62
HDAC4P56524 OR1H1P-201ENST00000448731 937 ntBASIC4.93□□□□□ -1.62
HDAC4P56524 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HDAC4P56524 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HDAC4P56524 AL445433.1-201ENST00000457507 257 ntBASIC4.93□□□□□ -1.62
HDAC4P56524 IGLV2-34-201ENST00000490007 283 ntBASIC4.93□□□□□ -1.62
HDAC4P56524 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.93□□□□□ -1.62
HDAC4P56524 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HDAC4P56524 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.93□□□□□ -1.62
HDAC4P56524 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC4.93□□□□□ -1.62
HDAC4P56524 NDUFB4P12-201ENST00000513465 390 ntBASIC4.93□□□□□ -1.62
HDAC4P56524 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC4.93□□□□□ -1.62
HDAC4P56524 Y_RNA.717-201ENST00000517106 92 ntBASIC4.93□□□□□ -1.62
HDAC4P56524 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC4.93□□□□□ -1.62
HDAC4P56524 AC034205.1-201ENST00000520621 638 ntBASIC4.93□□□□□ -1.62
HDAC4P56524 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC4.93□□□□□ -1.62
HDAC4P56524 HMGB1P1-201ENST00000522557 636 ntBASIC4.93□□□□□ -1.62
HDAC4P56524 OR8G5-201ENST00000524943 1041 ntBASIC4.93□□□□□ -1.62
HDAC4P56524 AP002812.4-201ENST00000532139 286 ntBASIC4.93□□□□□ -1.62
HDAC4P56524 LINC00644-201ENST00000555156 295 ntTSL 2 BASIC4.93□□□□□ -1.62
HDAC4P56524 AC012404.2-201ENST00000558572 481 ntTSL 3 BASIC4.93□□□□□ -1.62
HDAC4P56524 ATP5F1P7-201ENST00000567330 760 ntBASIC4.93□□□□□ -1.62
HDAC4P56524 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC4.93□□□□□ -1.62
HDAC4P56524 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.93□□□□□ -1.62
HDAC4P56524 AL512782.1-201ENST00000603093 364 ntBASIC4.93□□□□□ -1.62
HDAC4P56524 AL391358.1-201ENST00000605342 190 ntBASIC4.93□□□□□ -1.62
HDAC4P56524 SNORD91B-202ENST00000608459 222 ntBASIC4.93□□□□□ -1.62
HDAC4P56524 AL157392.4-201ENST00000609756 345 ntBASIC4.93□□□□□ -1.62
HDAC4P56524 AL121890.3-201ENST00000618494 516 ntBASIC4.93□□□□□ -1.62
HDAC4P56524 AC138907.10-201ENST00000623708 983 ntBASIC4.93□□□□□ -1.62
HDAC4P56524 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC4.93□□□□□ -1.62
HDAC4P56524 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
HDAC4P56524 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.93□□□□□ -1.62
HDAC4P56524 SEC63P2-201ENST00000503863 1939 ntBASIC4.93□□□□□ -1.62
HDAC4P56524 AC092329.3-201ENST00000611392 1904 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
HDAC4P56524 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.93□□□□□ -1.62
HDAC4P56524 AC139713.2-209ENST00000509873 1303 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HDAC4P56524 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
HDAC4P56524 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HDAC4P56524 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.92□□□□□ -1.62
HDAC4P56524 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HDAC4P56524 KLRC1-202ENST00000359151 1407 ntAPPRIS P4 TSL 1 (best) BASIC4.92□□□□□ -1.62
HDAC4P56524 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC4.92□□□□□ -1.62
HDAC4P56524 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
HDAC4P56524 RNU6-984P-201ENST00000363236 109 ntBASIC4.92□□□□□ -1.62
HDAC4P56524 RNU1-83P-201ENST00000363426 164 ntBASIC4.92□□□□□ -1.62
HDAC4P56524 USP9YP21-201ENST00000420603 432 ntBASIC4.92□□□□□ -1.62
HDAC4P56524 AL158073.1-201ENST00000426848 1104 ntBASIC4.92□□□□□ -1.62
HDAC4P56524 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC4.92□□□□□ -1.62
HDAC4P56524 PPIAP13-201ENST00000434706 478 ntBASIC4.92□□□□□ -1.62
HDAC4P56524 RPS20P1-201ENST00000434853 354 ntBASIC4.92□□□□□ -1.62
HDAC4P56524 AC005154.2-201ENST00000438110 379 ntBASIC4.92□□□□□ -1.62
HDAC4P56524 AL162388.1-201ENST00000450912 352 ntBASIC4.92□□□□□ -1.62
HDAC4P56524 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC4.92□□□□□ -1.62
HDAC4P56524 CREM-226ENST00000469949 721 ntTSL 3 BASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 74.6 ms