Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
EPHB3P54753 PIGPP2-201ENST00000411569 458 ntBASIC5.81□□□□□ -1.48
EPHB3P54753 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC5.81□□□□□ -1.48
EPHB3P54753 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.81□□□□□ -1.48
EPHB3P54753 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC5.81□□□□□ -1.48
EPHB3P54753 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC5.81□□□□□ -1.48
EPHB3P54753 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC5.81□□□□□ -1.48
EPHB3P54753 RPL7P44-201ENST00000424827 742 ntBASIC5.81□□□□□ -1.48
EPHB3P54753 FAM96AP1-201ENST00000430879 482 ntBASIC5.81□□□□□ -1.48
EPHB3P54753 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC5.81□□□□□ -1.48
EPHB3P54753 FKBP7-205ENST00000434643 666 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
EPHB3P54753 AL512286.1-201ENST00000439244 400 ntBASIC5.81□□□□□ -1.48
EPHB3P54753 AC023512.1-201ENST00000444513 499 ntBASIC5.81□□□□□ -1.48
EPHB3P54753 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC5.81□□□□□ -1.48
EPHB3P54753 AL596266.1-201ENST00000448132 400 ntBASIC5.81□□□□□ -1.48
EPHB3P54753 MTND1P18-201ENST00000448191 573 ntBASIC5.81□□□□□ -1.48
EPHB3P54753 AC013267.1-201ENST00000458227 267 ntBASIC5.81□□□□□ -1.48
EPHB3P54753 ATP5LP5-201ENST00000483050 299 ntBASIC5.81□□□□□ -1.48
EPHB3P54753 SUMO2P4-201ENST00000504193 276 ntBASIC5.81□□□□□ -1.48
EPHB3P54753 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC5.81□□□□□ -1.48
EPHB3P54753 AC091133.4-201ENST00000511142 308 ntBASIC5.81□□□□□ -1.48
EPHB3P54753 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC5.81□□□□□ -1.48
EPHB3P54753 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC5.81□□□□□ -1.48
EPHB3P54753 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.81□□□□□ -1.48
EPHB3P54753 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC5.81□□□□□ -1.48
EPHB3P54753 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC5.81□□□□□ -1.48
EPHB3P54753 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC5.81□□□□□ -1.48
EPHB3P54753 AC008126.1-201ENST00000549019 480 ntBASIC5.81□□□□□ -1.48
EPHB3P54753 AC126177.5-201ENST00000549599 178 ntBASIC5.81□□□□□ -1.48
EPHB3P54753 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC5.81□□□□□ -1.48
EPHB3P54753 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC5.81□□□□□ -1.48
EPHB3P54753 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
EPHB3P54753 AC005962.2-201ENST00000611427 652 ntBASIC5.81□□□□□ -1.48
EPHB3P54753 AL121612.2-201ENST00000612261 482 ntBASIC5.81□□□□□ -1.48
EPHB3P54753 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC5.81□□□□□ -1.48
EPHB3P54753 MESTIT1_2.1-201ENST00000616328 235 ntBASIC5.81□□□□□ -1.48
EPHB3P54753 AC037198.3-201ENST00000616754 526 ntBASIC5.81□□□□□ -1.48
EPHB3P54753 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC5.81□□□□□ -1.48
EPHB3P54753 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC5.81□□□□□ -1.48
EPHB3P54753 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
EPHB3P54753 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.81□□□□□ -1.48
EPHB3P54753 ALG11-202ENST00000521508 2558 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
EPHB3P54753 MTND5P23-201ENST00000430812 1655 ntBASIC5.81□□□□□ -1.48
EPHB3P54753 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
EPHB3P54753 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC5.81□□□□□ -1.48
EPHB3P54753 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
EPHB3P54753 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
EPHB3P54753 ATP5A1P4-201ENST00000556888 1605 ntBASIC5.81□□□□□ -1.48
EPHB3P54753 OBSCN-201ENST00000284548 20432 ntTSL 2 BASIC5.81□□□□□ -1.48
EPHB3P54753 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.81□□□□□ -1.48
EPHB3P54753 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
EPHB3P54753 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC5.8□□□□□ -1.48
EPHB3P54753 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.8□□□□□ -1.48
EPHB3P54753 Y_RNA.311-201ENST00000365068 96 ntBASIC5.8□□□□□ -1.48
EPHB3P54753 RNU1-136P-201ENST00000384181 164 ntBASIC5.8□□□□□ -1.48
EPHB3P54753 Y_RNA.453-201ENST00000384223 109 ntBASIC5.8□□□□□ -1.48
EPHB3P54753 RNU6-876P-201ENST00000391295 104 ntBASIC5.8□□□□□ -1.48
EPHB3P54753 RPS20P15-201ENST00000412792 311 ntBASIC5.8□□□□□ -1.48
EPHB3P54753 EEF1A1P40-201ENST00000412883 573 ntBASIC5.8□□□□□ -1.48
EPHB3P54753 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC5.8□□□□□ -1.48
EPHB3P54753 SETP9-201ENST00000423837 832 ntBASIC5.8□□□□□ -1.48
EPHB3P54753 PRUNEP1-201ENST00000425846 705 ntBASIC5.8□□□□□ -1.48
EPHB3P54753 YWHAEP5-201ENST00000431545 765 ntBASIC5.8□□□□□ -1.48
EPHB3P54753 BTF3P10-201ENST00000433415 495 ntBASIC5.8□□□□□ -1.48
EPHB3P54753 KCTD9P3-201ENST00000434597 1169 ntBASIC5.8□□□□□ -1.48
EPHB3P54753 AL590399.4-201ENST00000436561 601 ntBASIC5.8□□□□□ -1.48
EPHB3P54753 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
EPHB3P54753 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.8□□□□□ -1.48
EPHB3P54753 DPPA3P1-201ENST00000448050 469 ntBASIC5.8□□□□□ -1.48
EPHB3P54753 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC5.8□□□□□ -1.48
EPHB3P54753 RFC5P1-201ENST00000454419 874 ntBASIC5.8□□□□□ -1.48
EPHB3P54753 RPL12P39-201ENST00000455456 496 ntBASIC5.8□□□□□ -1.48
EPHB3P54753 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC5.8□□□□□ -1.48
EPHB3P54753 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC5.8□□□□□ -1.48
EPHB3P54753 PSAT1P4-201ENST00000466500 526 ntBASIC5.8□□□□□ -1.48
EPHB3P54753 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC5.8□□□□□ -1.48
EPHB3P54753 VPS26AP1-201ENST00000483197 979 ntBASIC5.8□□□□□ -1.48
EPHB3P54753 AC072052.1-201ENST00000496556 306 ntBASIC5.8□□□□□ -1.48
EPHB3P54753 PTPN20-212ENST00000502254 599 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
EPHB3P54753 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC5.8□□□□□ -1.48
EPHB3P54753 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC5.8□□□□□ -1.48
EPHB3P54753 SCARNA16.4-201ENST00000516956 187 ntBASIC5.8□□□□□ -1.48
EPHB3P54753 AP001804.2-201ENST00000533932 910 ntBASIC5.8□□□□□ -1.48
EPHB3P54753 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC5.8□□□□□ -1.48
EPHB3P54753 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC5.8□□□□□ -1.48
EPHB3P54753 AC091489.2-201ENST00000566263 604 ntBASIC5.8□□□□□ -1.48
EPHB3P54753 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
EPHB3P54753 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC5.8□□□□□ -1.48
EPHB3P54753 AC005498.1-201ENST00000592125 465 ntBASIC5.8□□□□□ -1.48
EPHB3P54753 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC5.8□□□□□ -1.48
EPHB3P54753 AC010680.3-201ENST00000604215 520 ntBASIC5.8□□□□□ -1.48
EPHB3P54753 AL049634.3-201ENST00000604968 457 ntBASIC5.8□□□□□ -1.48
EPHB3P54753 AC055764.2-201ENST00000610089 670 ntBASIC5.8□□□□□ -1.48
EPHB3P54753 AL353726.1-201ENST00000614041 1000 ntBASIC5.8□□□□□ -1.48
EPHB3P54753 AC011472.4-201ENST00000615848 491 ntBASIC5.8□□□□□ -1.48
EPHB3P54753 AC074101.1-201ENST00000637861 241 ntBASIC5.8□□□□□ -1.48
EPHB3P54753 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.8□□□□□ -1.48
EPHB3P54753 AC007938.2-201ENST00000604666 2634 ntBASIC5.8□□□□□ -1.48
EPHB3P54753 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
EPHB3P54753 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms