Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 VN1R54P-201ENST00000435210 1049 ntBASIC6.06□□□□□ -1.44
PMS1P54277 VN1R10P-201ENST00000447106 875 ntBASIC6.06□□□□□ -1.44
PMS1P54277 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC6.06□□□□□ -1.44
PMS1P54277 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC6.06□□□□□ -1.44
PMS1P54277 RPL18AP17-201ENST00000455326 198 ntBASIC6.06□□□□□ -1.44
PMS1P54277 ABCC13-202ENST00000463099 3842 ntBASIC6.06□□□□□ -1.44
PMS1P54277 KLF3P2-201ENST00000465138 268 ntBASIC6.06□□□□□ -1.44
PMS1P54277 RN7SL649P-201ENST00000496974 275 ntBASIC6.06□□□□□ -1.44
PMS1P54277 PRDX4P1-201ENST00000507189 574 ntBASIC6.06□□□□□ -1.44
PMS1P54277 SCARNA20.4-201ENST00000516969 131 ntBASIC6.06□□□□□ -1.44
PMS1P54277 HIGD1AP6-201ENST00000521833 279 ntBASIC6.06□□□□□ -1.44
PMS1P54277 OSBPL9P2-201ENST00000526582 1228 ntBASIC6.06□□□□□ -1.44
PMS1P54277 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC6.06□□□□□ -1.44
PMS1P54277 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC6.06□□□□□ -1.44
PMS1P54277 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC6.06□□□□□ -1.44
PMS1P54277 AP005205.1-201ENST00000563503 508 ntBASIC6.06□□□□□ -1.44
PMS1P54277 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC6.06□□□□□ -1.44
PMS1P54277 AC002094.2-201ENST00000577850 1121 ntTSL 5 BASIC6.06□□□□□ -1.44
PMS1P54277 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC6.06□□□□□ -1.44
PMS1P54277 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC6.06□□□□□ -1.44
PMS1P54277 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC6.06□□□□□ -1.44
PMS1P54277 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC6.06□□□□□ -1.44
PMS1P54277 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC6.06□□□□□ -1.44
PMS1P54277 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC6.06□□□□□ -1.44
PMS1P54277 uc_338.9-201ENST00000617424 182 ntBASIC6.06□□□□□ -1.44
PMS1P54277 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
PMS1P54277 AP000648.2-201ENST00000624182 404 ntBASIC6.06□□□□□ -1.44
PMS1P54277 AC120349.2-201ENST00000625002 298 ntBASIC6.06□□□□□ -1.44
PMS1P54277 MIR193BHG-214ENST00000641765 509 ntBASIC6.06□□□□□ -1.44
PMS1P54277 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
PMS1P54277 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PMS1P54277 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PMS1P54277 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC6.06□□□□□ -1.44
PMS1P54277 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC6.06□□□□□ -1.44
PMS1P54277 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PMS1P54277 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
PMS1P54277 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC6.06□□□□□ -1.44
PMS1P54277 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PMS1P54277 AC020656.2-201ENST00000613291 5309 ntBASIC6.06□□□□□ -1.44
PMS1P54277 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
PMS1P54277 MTND4P16-201ENST00000466108 1367 ntBASIC6.06□□□□□ -1.44
PMS1P54277 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
PMS1P54277 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC6.05□□□□□ -1.44
PMS1P54277 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PMS1P54277 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PMS1P54277 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PMS1P54277 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
PMS1P54277 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PMS1P54277 CR848007.1-201ENST00000442354 1699 ntBASIC6.05□□□□□ -1.44
PMS1P54277 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PMS1P54277 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC6.05□□□□□ -1.44
PMS1P54277 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PMS1P54277 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
PMS1P54277 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PMS1P54277 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
PMS1P54277 RNU5F-6P-201ENST00000362979 116 ntBASIC6.05□□□□□ -1.44
PMS1P54277 RN7SKP186-201ENST00000365371 303 ntBASIC6.05□□□□□ -1.44
PMS1P54277 ADIG-201ENST00000373348 430 ntTSL 2 BASIC6.05□□□□□ -1.44
PMS1P54277 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PMS1P54277 Y_RNA.582-201ENST00000391023 95 ntBASIC6.05□□□□□ -1.44
PMS1P54277 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
PMS1P54277 RPS3AP24-201ENST00000407896 734 ntBASIC6.05□□□□□ -1.44
PMS1P54277 AC002524.1-201ENST00000411687 547 ntBASIC6.05□□□□□ -1.44
PMS1P54277 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC6.05□□□□□ -1.44
PMS1P54277 AC113412.1-201ENST00000425840 504 ntBASIC6.05□□□□□ -1.44
PMS1P54277 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC6.05□□□□□ -1.44
PMS1P54277 MTND3P21-201ENST00000433774 331 ntBASIC6.05□□□□□ -1.44
PMS1P54277 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC6.05□□□□□ -1.44
PMS1P54277 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC6.05□□□□□ -1.44
PMS1P54277 AC122718.1-201ENST00000439448 744 ntBASIC6.05□□□□□ -1.44
PMS1P54277 AC019185.1-201ENST00000442718 389 ntBASIC6.05□□□□□ -1.44
PMS1P54277 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC6.05□□□□□ -1.44
PMS1P54277 FAM133DP-201ENST00000464802 691 ntBASIC6.05□□□□□ -1.44
PMS1P54277 NDUFA5P5-201ENST00000468361 342 ntBASIC6.05□□□□□ -1.44
PMS1P54277 RPL31P58-201ENST00000469001 379 ntBASIC6.05□□□□□ -1.44
PMS1P54277 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC6.05□□□□□ -1.44
PMS1P54277 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC6.05□□□□□ -1.44
PMS1P54277 OR4G11P-201ENST00000492842 939 ntBASIC6.05□□□□□ -1.44
PMS1P54277 RPL7P24-201ENST00000493052 752 ntBASIC6.05□□□□□ -1.44
PMS1P54277 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC6.05□□□□□ -1.44
PMS1P54277 AC034238.3-201ENST00000512349 591 ntTSL 4 BASIC6.05□□□□□ -1.44
PMS1P54277 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC6.05□□□□□ -1.44
PMS1P54277 AC108471.1-201ENST00000513977 287 ntBASIC6.05□□□□□ -1.44
PMS1P54277 SNORA48.10-201ENST00000516965 160 ntBASIC6.05□□□□□ -1.44
PMS1P54277 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC6.05□□□□□ -1.44
PMS1P54277 IGKV2-36-201ENST00000519999 223 ntBASIC6.05□□□□□ -1.44
PMS1P54277 OR4A45P-201ENST00000529954 901 ntBASIC6.05□□□□□ -1.44
PMS1P54277 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC6.05□□□□□ -1.44
PMS1P54277 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC6.05□□□□□ -1.44
PMS1P54277 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC6.05□□□□□ -1.44
PMS1P54277 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC6.05□□□□□ -1.44
PMS1P54277 MRPS21P7-201ENST00000566937 238 ntBASIC6.05□□□□□ -1.44
PMS1P54277 H3F3BP2-201ENST00000583907 357 ntBASIC6.05□□□□□ -1.44
PMS1P54277 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC6.05□□□□□ -1.44
PMS1P54277 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
PMS1P54277 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC6.05□□□□□ -1.44
PMS1P54277 AC073869.8-201ENST00000641806 335 ntBASIC6.05□□□□□ -1.44
PMS1P54277 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PMS1P54277 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC6.05□□□□□ -1.44
PMS1P54277 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms