Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 FTO-203ENST00000460382 1517 ntTSL 5 BASIC4.12□□□□□ -1.75
RORAP35398 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
RORAP35398 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.12□□□□□ -1.75
RORAP35398 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.12□□□□□ -1.75
RORAP35398 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
RORAP35398 AL121657.1-201ENST00000327215 531 ntBASIC4.12□□□□□ -1.75
RORAP35398 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.12□□□□□ -1.75
RORAP35398 RNU1-44P-201ENST00000384453 163 ntBASIC4.12□□□□□ -1.75
RORAP35398 RPS26P8-201ENST00000393490 348 ntBASIC4.12□□□□□ -1.75
RORAP35398 AL161909.1-201ENST00000397390 712 ntBASIC4.12□□□□□ -1.75
RORAP35398 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RORAP35398 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC4.12□□□□□ -1.75
RORAP35398 RPS20P14-201ENST00000412545 360 ntBASIC4.12□□□□□ -1.75
RORAP35398 NRBF2P2-201ENST00000413087 861 ntBASIC4.12□□□□□ -1.75
RORAP35398 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC4.12□□□□□ -1.75
RORAP35398 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.12□□□□□ -1.75
RORAP35398 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
RORAP35398 AL136099.1-201ENST00000436492 557 ntTSL 3 BASIC4.12□□□□□ -1.75
RORAP35398 AC005229.2-201ENST00000456995 399 ntBASIC4.12□□□□□ -1.75
RORAP35398 RPS20P4-201ENST00000461659 355 ntBASIC4.12□□□□□ -1.75
RORAP35398 PANCR-201ENST00000503456 493 ntTSL 5 BASIC4.12□□□□□ -1.75
RORAP35398 ATP1B1P1-201ENST00000509767 915 ntBASIC4.12□□□□□ -1.75
RORAP35398 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RORAP35398 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.12□□□□□ -1.75
RORAP35398 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC4.12□□□□□ -1.75
RORAP35398 MTCO1P35-201ENST00000515270 228 ntBASIC4.12□□□□□ -1.75
RORAP35398 SNORA70.17-201ENST00000516449 133 ntBASIC4.12□□□□□ -1.75
RORAP35398 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.12□□□□□ -1.75
RORAP35398 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC4.12□□□□□ -1.75
RORAP35398 OR5BC1P-201ENST00000529327 739 ntBASIC4.12□□□□□ -1.75
RORAP35398 AC009268.1-201ENST00000561352 1203 ntBASIC4.12□□□□□ -1.75
RORAP35398 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.12□□□□□ -1.75
RORAP35398 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
RORAP35398 uc_338.9-201ENST00000617424 182 ntBASIC4.12□□□□□ -1.75
RORAP35398 AC007546.2-201ENST00000623996 360 ntBASIC4.12□□□□□ -1.75
RORAP35398 MIR492-201ENST00000638676 116 ntBASIC4.12□□□□□ -1.75
RORAP35398 AC090229.1-201ENST00000590983 1609 ntBASIC4.12□□□□□ -1.75
RORAP35398 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
RORAP35398 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
RORAP35398 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
RORAP35398 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
RORAP35398 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
RORAP35398 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.11□□□□□ -1.75
RORAP35398 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.11□□□□□ -1.75
RORAP35398 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RORAP35398 AL133412.1-201ENST00000380194 2992 ntBASIC4.11□□□□□ -1.75
RORAP35398 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RORAP35398 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RORAP35398 RHOT1P2-201ENST00000366423 333 ntBASIC4.11□□□□□ -1.75
RORAP35398 MIR320B1-201ENST00000390209 79 ntBASIC4.11□□□□□ -1.75
RORAP35398 AL583835.1-201ENST00000399570 407 ntBASIC4.11□□□□□ -1.75
RORAP35398 GSTM3P2-201ENST00000412746 530 ntBASIC4.11□□□□□ -1.75
RORAP35398 SLC4A1APP1-201ENST00000419995 602 ntBASIC4.11□□□□□ -1.75
RORAP35398 RFESDP1-201ENST00000422350 461 ntBASIC4.11□□□□□ -1.75
RORAP35398 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC4.11□□□□□ -1.75
RORAP35398 AC114755.5-201ENST00000447760 831 ntBASIC4.11□□□□□ -1.75
RORAP35398 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC4.11□□□□□ -1.75
RORAP35398 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC4.11□□□□□ -1.75
RORAP35398 RNU7-27P-201ENST00000459281 62 ntBASIC4.11□□□□□ -1.75
RORAP35398 EIF2S2P4-201ENST00000461070 984 ntBASIC4.11□□□□□ -1.75
RORAP35398 AC020898.1-201ENST00000474167 787 ntBASIC4.11□□□□□ -1.75
RORAP35398 AC146944.2-203ENST00000502493 354 ntBASIC4.11□□□□□ -1.75
RORAP35398 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.11□□□□□ -1.75
RORAP35398 AC139495.1-202ENST00000513164 354 ntBASIC4.11□□□□□ -1.75
RORAP35398 AC067904.2-201ENST00000517322 1283 ntBASIC4.11□□□□□ -1.75
RORAP35398 AC104997.1-201ENST00000519761 717 ntBASIC4.11□□□□□ -1.75
RORAP35398 AC090151.1-201ENST00000520784 730 ntBASIC4.11□□□□□ -1.75
RORAP35398 OR7E10P-201ENST00000526420 991 ntBASIC4.11□□□□□ -1.75
RORAP35398 LINC02404-201ENST00000546710 1188 ntTSL 5 BASIC4.11□□□□□ -1.75
RORAP35398 LINC02394-201ENST00000549140 543 ntTSL 4 BASIC4.11□□□□□ -1.75
RORAP35398 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.11□□□□□ -1.75
RORAP35398 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.11□□□□□ -1.75
RORAP35398 BNIP3P5-201ENST00000562290 498 ntBASIC4.11□□□□□ -1.75
RORAP35398 AC022884.3-201ENST00000579571 248 ntBASIC4.11□□□□□ -1.75
RORAP35398 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC4.11□□□□□ -1.75
RORAP35398 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
RORAP35398 SLC25A36P1-201ENST00000590111 465 ntBASIC4.11□□□□□ -1.75
RORAP35398 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.11□□□□□ -1.75
RORAP35398 MTCO2P22-201ENST00000603246 681 ntBASIC4.11□□□□□ -1.75
RORAP35398 AL139395.1-201ENST00000603662 160 ntBASIC4.11□□□□□ -1.75
RORAP35398 AC067959.1-201ENST00000604334 379 ntBASIC4.11□□□□□ -1.75
RORAP35398 AL391834.1-201ENST00000609609 560 ntBASIC4.11□□□□□ -1.75
RORAP35398 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RORAP35398 AL021997.2-201ENST00000615674 271 ntBASIC4.11□□□□□ -1.75
RORAP35398 AC016957.2-201ENST00000616998 848 ntBASIC4.11□□□□□ -1.75
RORAP35398 ZYXP1-201ENST00000617638 118 ntBASIC4.11□□□□□ -1.75
RORAP35398 MIR8059-201ENST00000620427 81 ntBASIC4.11□□□□□ -1.75
RORAP35398 MIR4727-201ENST00000622232 55 ntBASIC4.11□□□□□ -1.75
RORAP35398 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.11□□□□□ -1.75
RORAP35398 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC4.11□□□□□ -1.75
RORAP35398 AC007529.1-201ENST00000418574 2178 ntBASIC4.11□□□□□ -1.75
RORAP35398 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
RORAP35398 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.11□□□□□ -1.75
RORAP35398 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
RORAP35398 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.11□□□□□ -1.75
RORAP35398 LARP1BP1-201ENST00000506036 1359 ntBASIC4.11□□□□□ -1.75
RORAP35398 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.11□□□□□ -1.75
RORAP35398 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.11□□□□□ -1.75
RORAP35398 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.11□□□□□ -1.75
RORAP35398 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 187 ms