Protein–RNA interactions for Protein: P35249

RFC4, Replication factor C subunit 4, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4P35249 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.09□□□□□ -1.59
RFC4P35249 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC5.09□□□□□ -1.59
RFC4P35249 AC073346.2-201ENST00000624724 2058 ntBASIC5.09□□□□□ -1.59
RFC4P35249 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC5.09□□□□□ -1.6
RFC4P35249 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC5.09□□□□□ -1.6
RFC4P35249 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
RFC4P35249 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RFC4P35249 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.08□□□□□ -1.6
RFC4P35249 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.08□□□□□ -1.6
RFC4P35249 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RFC4P35249 RNA5SP97-201ENST00000365006 84 ntBASIC5.08□□□□□ -1.6
RFC4P35249 SNORA11.2-201ENST00000408318 127 ntBASIC5.08□□□□□ -1.6
RFC4P35249 MIR1271-201ENST00000408537 86 ntBASIC5.08□□□□□ -1.6
RFC4P35249 RN7SKP97-201ENST00000410966 333 ntBASIC5.08□□□□□ -1.6
RFC4P35249 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC5.08□□□□□ -1.6
RFC4P35249 BTG3P1-201ENST00000435859 716 ntBASIC5.08□□□□□ -1.6
RFC4P35249 TMX2P1-201ENST00000436507 708 ntBASIC5.08□□□□□ -1.6
RFC4P35249 MTND6P18-201ENST00000439477 513 ntBASIC5.08□□□□□ -1.6
RFC4P35249 PRDX3P3-201ENST00000447765 522 ntBASIC5.08□□□□□ -1.6
RFC4P35249 AC104306.1-201ENST00000449702 371 ntBASIC5.08□□□□□ -1.6
RFC4P35249 AL445433.1-201ENST00000457507 257 ntBASIC5.08□□□□□ -1.6
RFC4P35249 PLGLA-201ENST00000465668 449 ntBASIC5.08□□□□□ -1.6
RFC4P35249 PPIAP15-201ENST00000479662 484 ntBASIC5.08□□□□□ -1.6
RFC4P35249 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
RFC4P35249 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC5.08□□□□□ -1.6
RFC4P35249 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC5.08□□□□□ -1.6
RFC4P35249 IGKV2D-19-201ENST00000523346 262 ntBASIC5.08□□□□□ -1.6
RFC4P35249 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC5.08□□□□□ -1.6
RFC4P35249 OR8I1P-201ENST00000529291 931 ntBASIC5.08□□□□□ -1.6
RFC4P35249 AC026462.4-202ENST00000564331 532 ntTSL 3 BASIC5.08□□□□□ -1.6
RFC4P35249 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC5.08□□□□□ -1.6
RFC4P35249 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC5.08□□□□□ -1.6
RFC4P35249 AF131215.7-201ENST00000602443 707 ntBASIC5.08□□□□□ -1.6
RFC4P35249 AC114878.2-201ENST00000604863 1251 ntBASIC5.08□□□□□ -1.6
RFC4P35249 AL451044.1-201ENST00000604867 238 ntBASIC5.08□□□□□ -1.6
RFC4P35249 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC5.08□□□□□ -1.6
RFC4P35249 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC5.08□□□□□ -1.6
RFC4P35249 AC016957.2-201ENST00000616998 848 ntBASIC5.08□□□□□ -1.6
RFC4P35249 AC022106.2-201ENST00000620114 757 ntBASIC5.08□□□□□ -1.6
RFC4P35249 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
RFC4P35249 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC5.08□□□□□ -1.6
RFC4P35249 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC5.08□□□□□ -1.6
RFC4P35249 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.08□□□□□ -1.6
RFC4P35249 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
RFC4P35249 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.08□□□□□ -1.6
RFC4P35249 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
RFC4P35249 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC5.07□□□□□ -1.6
RFC4P35249 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RFC4P35249 OSGEPL1-201ENST00000264151 1885 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
RFC4P35249 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
RFC4P35249 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC5.07□□□□□ -1.6
RFC4P35249 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
RFC4P35249 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC5.07□□□□□ -1.6
RFC4P35249 SNORD96B-201ENST00000386148 79 ntBASIC5.07□□□□□ -1.6
RFC4P35249 PTMAP5-201ENST00000393073 333 ntBASIC5.07□□□□□ -1.6
RFC4P35249 RNU2-65P-201ENST00000410162 185 ntBASIC5.07□□□□□ -1.6
RFC4P35249 VDAC1P9-201ENST00000412766 841 ntBASIC5.07□□□□□ -1.6
RFC4P35249 AL450992.3-201ENST00000413192 568 ntBASIC5.07□□□□□ -1.6
RFC4P35249 MTND2P15-201ENST00000418575 892 ntBASIC5.07□□□□□ -1.6
RFC4P35249 Z97055.1-201ENST00000419730 712 ntBASIC5.07□□□□□ -1.6
RFC4P35249 AC022022.1-201ENST00000430304 178 ntBASIC5.07□□□□□ -1.6
RFC4P35249 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC5.07□□□□□ -1.6
RFC4P35249 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.07□□□□□ -1.6
RFC4P35249 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC5.07□□□□□ -1.6
RFC4P35249 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC5.07□□□□□ -1.6
RFC4P35249 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.07□□□□□ -1.6
RFC4P35249 AC021733.1-201ENST00000519786 325 ntTSL 3 BASIC5.07□□□□□ -1.6
RFC4P35249 AC090151.1-201ENST00000520784 730 ntBASIC5.07□□□□□ -1.6
RFC4P35249 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC5.07□□□□□ -1.6
RFC4P35249 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC5.07□□□□□ -1.6
RFC4P35249 AC093014.1-201ENST00000548926 724 ntBASIC5.07□□□□□ -1.6
RFC4P35249 GTF2IP22-201ENST00000554443 182 ntBASIC5.07□□□□□ -1.6
RFC4P35249 AC012417.1-201ENST00000582307 1039 ntBASIC5.07□□□□□ -1.6
RFC4P35249 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC5.07□□□□□ -1.6
RFC4P35249 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC5.07□□□□□ -1.6
RFC4P35249 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC5.07□□□□□ -1.6
RFC4P35249 AC007342.8-201ENST00000623278 678 ntBASIC5.07□□□□□ -1.6
RFC4P35249 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC5.07□□□□□ -1.6
RFC4P35249 DDX18P3-201ENST00000404856 2007 ntBASIC5.07□□□□□ -1.6
RFC4P35249 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
RFC4P35249 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC5.07□□□□□ -1.6
RFC4P35249 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC5.07□□□□□ -1.6
RFC4P35249 AMY2B-201ENST00000361355 2181 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RFC4P35249 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
RFC4P35249 AC126323.6-202ENST00000568092 3511 ntBASIC5.06□□□□□ -1.6
RFC4P35249 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
RFC4P35249 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
RFC4P35249 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC5.06□□□□□ -1.6
RFC4P35249 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC5.06□□□□□ -1.6
RFC4P35249 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
RFC4P35249 RNA5SP72-201ENST00000364442 117 ntBASIC5.06□□□□□ -1.6
RFC4P35249 RNA5SP22-201ENST00000365393 109 ntBASIC5.06□□□□□ -1.6
RFC4P35249 RN7SKP167-201ENST00000411047 285 ntBASIC5.06□□□□□ -1.6
RFC4P35249 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC5.06□□□□□ -1.6
RFC4P35249 RPS29P4-201ENST00000414733 161 ntBASIC5.06□□□□□ -1.6
RFC4P35249 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC5.06□□□□□ -1.6
RFC4P35249 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC5.06□□□□□ -1.6
RFC4P35249 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC5.06□□□□□ -1.6
RFC4P35249 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC5.06□□□□□ -1.6
RFC4P35249 AP000936.3-201ENST00000438127 255 ntBASIC5.06□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms