Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
USP6P35125 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
USP6P35125 MTND5P1-201ENST00000445440 1375 ntBASIC5.2□□□□□ -1.58
USP6P35125 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
USP6P35125 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
USP6P35125 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
USP6P35125 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
USP6P35125 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
USP6P35125 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
USP6P35125 RNU2-65P-201ENST00000410162 185 ntBASIC5.2□□□□□ -1.58
USP6P35125 NPM1P48-201ENST00000436002 853 ntBASIC5.2□□□□□ -1.58
USP6P35125 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC5.2□□□□□ -1.58
USP6P35125 HLA-N-201ENST00000437516 135 ntBASIC5.2□□□□□ -1.58
USP6P35125 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC5.2□□□□□ -1.58
USP6P35125 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC5.2□□□□□ -1.58
USP6P35125 BIRC6-AS1-201ENST00000455572 697 ntTSL 3 BASIC5.2□□□□□ -1.58
USP6P35125 AC092832.2-201ENST00000456621 389 ntTSL 2 BASIC5.2□□□□□ -1.58
USP6P35125 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC5.2□□□□□ -1.58
USP6P35125 RN7SL293P-201ENST00000481765 281 ntBASIC5.2□□□□□ -1.58
USP6P35125 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC5.2□□□□□ -1.58
USP6P35125 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC5.2□□□□□ -1.58
USP6P35125 RAC1P2-201ENST00000511164 579 ntBASIC5.2□□□□□ -1.58
USP6P35125 AC021146.3-201ENST00000511911 260 ntBASIC5.2□□□□□ -1.58
USP6P35125 RN7SKP18-201ENST00000516005 275 ntBASIC5.2□□□□□ -1.58
USP6P35125 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC5.2□□□□□ -1.58
USP6P35125 AC093591.2-201ENST00000565254 3843 ntBASIC5.2□□□□□ -1.58
USP6P35125 AL157762.1-201ENST00000619612 415 ntBASIC5.2□□□□□ -1.58
USP6P35125 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
USP6P35125 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC5.2□□□□□ -1.58
USP6P35125 C2CD6-204ENST00000450242 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
USP6P35125 AC005261.2-201ENST00000593427 4258 ntBASIC5.2□□□□□ -1.58
USP6P35125 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC5.2□□□□□ -1.58
USP6P35125 RXFP1-204ENST00000423548 3930 ntTSL 2 BASIC5.19□□□□□ -1.58
USP6P35125 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
USP6P35125 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC5.19□□□□□ -1.58
USP6P35125 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
USP6P35125 UBA6-AS1-203ENST00000500538 3352 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
USP6P35125 MTCO1P12-201ENST00000414273 1543 ntBASIC5.19□□□□□ -1.58
USP6P35125 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.19□□□□□ -1.58
USP6P35125 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC5.19□□□□□ -1.58
USP6P35125 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
USP6P35125 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC5.19□□□□□ -1.58
USP6P35125 RNVU1-14-201ENST00000384770 164 ntBASIC5.19□□□□□ -1.58
USP6P35125 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
USP6P35125 AC117434.1-201ENST00000419971 836 ntBASIC5.19□□□□□ -1.58
USP6P35125 HSFY1P1-201ENST00000423928 1178 ntBASIC5.19□□□□□ -1.58
USP6P35125 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC5.19□□□□□ -1.58
USP6P35125 RPS3AP46-201ENST00000448352 682 ntBASIC5.19□□□□□ -1.58
USP6P35125 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC5.19□□□□□ -1.58
USP6P35125 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC5.19□□□□□ -1.58
USP6P35125 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC5.19□□□□□ -1.58
USP6P35125 SEPT14P1-201ENST00000458703 648 ntBASIC5.19□□□□□ -1.58
USP6P35125 RPS26P28-201ENST00000470806 348 ntBASIC5.19□□□□□ -1.58
USP6P35125 LINC02325-201ENST00000499910 1115 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
USP6P35125 HMGN1P11-201ENST00000508668 303 ntBASIC5.19□□□□□ -1.58
USP6P35125 RNA5SP164-201ENST00000516533 110 ntBASIC5.19□□□□□ -1.58
USP6P35125 OR4A12P-201ENST00000530847 918 ntBASIC5.19□□□□□ -1.58
USP6P35125 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC5.19□□□□□ -1.58
USP6P35125 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC5.19□□□□□ -1.58
USP6P35125 CYP4A43P-201ENST00000568156 121 ntBASIC5.19□□□□□ -1.58
USP6P35125 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
USP6P35125 AL157938.2-209ENST00000589128 792 ntTSL 2 BASIC5.19□□□□□ -1.58
USP6P35125 AC068020.1-201ENST00000594215 661 ntBASIC5.19□□□□□ -1.58
USP6P35125 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC5.19□□□□□ -1.58
USP6P35125 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
USP6P35125 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC5.19□□□□□ -1.58
USP6P35125 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
USP6P35125 NUP205-201ENST00000285968 6266 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
USP6P35125 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
USP6P35125 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
USP6P35125 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC5.18□□□□□ -1.58
USP6P35125 CLECL1-201ENST00000327839 670 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
USP6P35125 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
USP6P35125 RANP7-201ENST00000418085 644 ntBASIC5.18□□□□□ -1.58
USP6P35125 RPL7P4-203ENST00000430239 730 ntBASIC5.18□□□□□ -1.58
USP6P35125 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC5.18□□□□□ -1.58
USP6P35125 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
USP6P35125 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
USP6P35125 RPL31P61-201ENST00000496160 376 ntBASIC5.18□□□□□ -1.58
USP6P35125 AL358832.1-201ENST00000497800 389 ntBASIC5.18□□□□□ -1.58
USP6P35125 OR5M7P-201ENST00000526140 972 ntBASIC5.18□□□□□ -1.58
USP6P35125 AC015849.3-201ENST00000603981 488 ntTSL 5 BASIC5.18□□□□□ -1.58
USP6P35125 AP001002.2-201ENST00000625137 386 ntBASIC5.18□□□□□ -1.58
USP6P35125 AC119674.1-207ENST00000641355 633 ntBASIC5.18□□□□□ -1.58
USP6P35125 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
USP6P35125 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
USP6P35125 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC5.18□□□□□ -1.58
USP6P35125 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
USP6P35125 AP001284.1-201ENST00000528393 2118 ntBASIC5.18□□□□□ -1.58
USP6P35125 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
USP6P35125 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
USP6P35125 SPATA31D2P-201ENST00000429999 4388 ntBASIC5.17□□□□□ -1.58
USP6P35125 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
USP6P35125 Y_RNA.111-201ENST00000363248 100 ntBASIC5.17□□□□□ -1.58
USP6P35125 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
USP6P35125 RNU6-316P-201ENST00000391027 107 ntBASIC5.17□□□□□ -1.58
USP6P35125 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC5.17□□□□□ -1.58
USP6P35125 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC5.17□□□□□ -1.58
USP6P35125 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC5.17□□□□□ -1.58
USP6P35125 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC5.17□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 109.3 ms