Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 NPM1P47-201ENST00000560843 856 ntBASIC5.07□□□□□ -1.6
NR4A1P22736 AC009063.1-201ENST00000563342 702 ntBASIC5.07□□□□□ -1.6
NR4A1P22736 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC5.07□□□□□ -1.6
NR4A1P22736 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC5.07□□□□□ -1.6
NR4A1P22736 AC010857.1-201ENST00000606398 594 ntBASIC5.07□□□□□ -1.6
NR4A1P22736 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.07□□□□□ -1.6
NR4A1P22736 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC5.07□□□□□ -1.6
NR4A1P22736 AC104985.2-201ENST00000620598 500 ntBASIC5.07□□□□□ -1.6
NR4A1P22736 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC5.07□□□□□ -1.6
NR4A1P22736 AC006840.1-201ENST00000623069 542 ntBASIC5.07□□□□□ -1.6
NR4A1P22736 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.07□□□□□ -1.6
NR4A1P22736 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC5.07□□□□□ -1.6
NR4A1P22736 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
NR4A1P22736 LINC01739-205ENST00000641890 573 ntBASIC5.07□□□□□ -1.6
NR4A1P22736 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC5.07□□□□□ -1.6
NR4A1P22736 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.07□□□□□ -1.6
NR4A1P22736 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.07□□□□□ -1.6
NR4A1P22736 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.07□□□□□ -1.6
NR4A1P22736 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC5.07□□□□□ -1.6
NR4A1P22736 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
NR4A1P22736 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.07□□□□□ -1.6
NR4A1P22736 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
NR4A1P22736 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC5.06□□□□□ -1.6
NR4A1P22736 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
NR4A1P22736 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC5.06□□□□□ -1.6
NR4A1P22736 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.06□□□□□ -1.6
NR4A1P22736 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
NR4A1P22736 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.06□□□□□ -1.6
NR4A1P22736 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
NR4A1P22736 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
NR4A1P22736 RNA5SP510-201ENST00000364697 99 ntBASIC5.06□□□□□ -1.6
NR4A1P22736 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.06□□□□□ -1.6
NR4A1P22736 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
NR4A1P22736 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.06□□□□□ -1.6
NR4A1P22736 MT-TP-201ENST00000387461 68 ntBASIC5.06□□□□□ -1.6
NR4A1P22736 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.06□□□□□ -1.6
NR4A1P22736 AGR3-202ENST00000402239 563 ntTSL 2 BASIC5.06□□□□□ -1.6
NR4A1P22736 SNORA11.3-201ENST00000408471 128 ntBASIC5.06□□□□□ -1.6
NR4A1P22736 RNA5SP487-201ENST00000410186 122 ntBASIC5.06□□□□□ -1.6
NR4A1P22736 RNU6-77P-201ENST00000410554 91 ntBASIC5.06□□□□□ -1.6
NR4A1P22736 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC5.06□□□□□ -1.6
NR4A1P22736 PIGPP2-201ENST00000411569 458 ntBASIC5.06□□□□□ -1.6
NR4A1P22736 AC245052.5-201ENST00000416320 649 ntBASIC5.06□□□□□ -1.6
NR4A1P22736 XIST-201ENST00000416330 750 ntTSL 2 BASIC5.06□□□□□ -1.6
NR4A1P22736 ATG4AP1-201ENST00000416893 538 ntBASIC5.06□□□□□ -1.6
NR4A1P22736 UBTFL3-201ENST00000418934 1024 ntBASIC5.06□□□□□ -1.6
NR4A1P22736 SLC44A3-AS1-205ENST00000424505 612 ntBASIC5.06□□□□□ -1.6
NR4A1P22736 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.06□□□□□ -1.6
NR4A1P22736 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC5.06□□□□□ -1.6
NR4A1P22736 RPS29P14-201ENST00000431518 171 ntBASIC5.06□□□□□ -1.6
NR4A1P22736 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC5.06□□□□□ -1.6
NR4A1P22736 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.06□□□□□ -1.6
NR4A1P22736 AC098614.3-201ENST00000438957 440 ntBASIC5.06□□□□□ -1.6
NR4A1P22736 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC5.06□□□□□ -1.6
NR4A1P22736 AL445665.1-202ENST00000452436 324 ntBASIC5.06□□□□□ -1.6
NR4A1P22736 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
NR4A1P22736 UBTFL6-201ENST00000477929 1024 ntBASIC5.06□□□□□ -1.6
NR4A1P22736 AC073522.1-201ENST00000483312 377 ntBASIC5.06□□□□□ -1.6
NR4A1P22736 SETSIP-201ENST00000485873 879 ntAPPRIS ALT2 BASIC5.06□□□□□ -1.6
NR4A1P22736 AC073610.1-201ENST00000489971 396 ntBASIC5.06□□□□□ -1.6
NR4A1P22736 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC5.06□□□□□ -1.6
NR4A1P22736 AC138866.2-201ENST00000508650 584 ntBASIC5.06□□□□□ -1.6
NR4A1P22736 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC5.06□□□□□ -1.6
NR4A1P22736 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC5.06□□□□□ -1.6
NR4A1P22736 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC5.06□□□□□ -1.6
NR4A1P22736 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC5.06□□□□□ -1.6
NR4A1P22736 AC079600.1-201ENST00000550326 297 ntBASIC5.06□□□□□ -1.6
NR4A1P22736 FLVCR2-207ENST00000555027 938 ntTSL 3 BASIC5.06□□□□□ -1.6
NR4A1P22736 AL132800.1-201ENST00000555109 698 ntTSL 5 BASIC5.06□□□□□ -1.6
NR4A1P22736 AL121579.1-201ENST00000555129 305 ntBASIC5.06□□□□□ -1.6
NR4A1P22736 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.06□□□□□ -1.6
NR4A1P22736 PRPF19P1-201ENST00000584766 898 ntBASIC5.06□□□□□ -1.6
NR4A1P22736 MIR7853-201ENST00000584820 132 ntBASIC5.06□□□□□ -1.6
NR4A1P22736 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
NR4A1P22736 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC5.06□□□□□ -1.6
NR4A1P22736 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC5.06□□□□□ -1.6
NR4A1P22736 NANOGP3-201ENST00000605855 286 ntBASIC5.06□□□□□ -1.6
NR4A1P22736 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.06□□□□□ -1.6
NR4A1P22736 AL159169.3-201ENST00000608871 561 ntBASIC5.06□□□□□ -1.6
NR4A1P22736 AC090970.3-201ENST00000612566 866 ntBASIC5.06□□□□□ -1.6
NR4A1P22736 SNORA11.6-201ENST00000619030 128 ntBASIC5.06□□□□□ -1.6
NR4A1P22736 AC012414.7-202ENST00000622705 1090 ntBASIC5.06□□□□□ -1.6
NR4A1P22736 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC5.06□□□□□ -1.6
NR4A1P22736 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC5.06□□□□□ -1.6
NR4A1P22736 AC003973.3-201ENST00000624863 2822 ntBASIC5.06□□□□□ -1.6
NR4A1P22736 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.06□□□□□ -1.6
NR4A1P22736 Z99496.1-201ENST00000469424 1477 ntBASIC5.06□□□□□ -1.6
NR4A1P22736 AC100871.1-201ENST00000507871 1456 ntBASIC5.06□□□□□ -1.6
NR4A1P22736 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC5.06□□□□□ -1.6
NR4A1P22736 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NR4A1P22736 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NR4A1P22736 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
NR4A1P22736 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NR4A1P22736 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.05□□□□□ -1.6
NR4A1P22736 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.05□□□□□ -1.6
NR4A1P22736 ICE2P1-201ENST00000512800 1849 ntBASIC5.05□□□□□ -1.6
NR4A1P22736 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
NR4A1P22736 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NR4A1P22736 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
NR4A1P22736 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms