Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
VCANP13611 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
VCANP13611 CCNT2-201ENST00000264157 6917 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
VCANP13611 FAM26D-202ENST00000368597 1311 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
VCANP13611 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
VCANP13611 TCEAL7-201ENST00000332431 1177 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
VCANP13611 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC3.82□□□□□ -1.8
VCANP13611 AL121878.1-201ENST00000418638 859 ntBASIC3.82□□□□□ -1.8
VCANP13611 RBMY1KP-201ENST00000423480 476 ntBASIC3.82□□□□□ -1.8
VCANP13611 AC245052.1-201ENST00000426213 410 ntTSL 3 BASIC3.82□□□□□ -1.8
VCANP13611 Z93242.1-201ENST00000427102 353 ntBASIC3.82□□□□□ -1.8
VCANP13611 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.82□□□□□ -1.8
VCANP13611 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.82□□□□□ -1.8
VCANP13611 AC093663.1-201ENST00000497190 394 ntBASIC3.82□□□□□ -1.8
VCANP13611 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC3.82□□□□□ -1.8
VCANP13611 AC091905.2-201ENST00000623143 306 ntBASIC3.82□□□□□ -1.8
VCANP13611 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
VCANP13611 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
VCANP13611 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
VCANP13611 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
VCANP13611 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC3.81□□□□□ -1.8
VCANP13611 ZFHX4-204ENST00000518282 12175 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
VCANP13611 MIR1911-201ENST00000410783 80 ntBASIC3.81□□□□□ -1.8
VCANP13611 RPS26P2-201ENST00000440331 348 ntBASIC3.81□□□□□ -1.8
VCANP13611 AC090013.1-201ENST00000485147 480 ntBASIC3.81□□□□□ -1.8
VCANP13611 AC007993.3-202ENST00000585329 725 ntTSL 5 BASIC3.81□□□□□ -1.8
VCANP13611 IGHV3-29-201ENST00000604817 344 ntBASIC3.81□□□□□ -1.8
VCANP13611 AL137790.1-201ENST00000634283 177 ntBASIC3.81□□□□□ -1.8
VCANP13611 AL161431.1-201ENST00000618966 4205 ntBASIC3.81□□□□□ -1.8
VCANP13611 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC3.81□□□□□ -1.8
VCANP13611 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
VCANP13611 SNORD35B-201ENST00000363660 87 ntBASIC3.81□□□□□ -1.8
VCANP13611 RNU1-140P-201ENST00000365040 165 ntBASIC3.81□□□□□ -1.8
VCANP13611 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
VCANP13611 TRAV36DV7-201ENST00000390463 356 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
VCANP13611 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.81□□□□□ -1.8
VCANP13611 SETD6P1-201ENST00000444575 317 ntBASIC3.81□□□□□ -1.8
VCANP13611 RPL7P36-201ENST00000444633 681 ntBASIC3.81□□□□□ -1.8
VCANP13611 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.81□□□□□ -1.8
VCANP13611 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.81□□□□□ -1.8
VCANP13611 AC008040.1-202ENST00000483289 6251 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
VCANP13611 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC3.8□□□□□ -1.8
VCANP13611 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.8□□□□□ -1.8
VCANP13611 VN1R32P-201ENST00000452234 905 ntBASIC3.8□□□□□ -1.8
VCANP13611 AL445433.1-201ENST00000457507 257 ntBASIC3.8□□□□□ -1.8
VCANP13611 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC3.8□□□□□ -1.8
VCANP13611 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC3.8□□□□□ -1.8
VCANP13611 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
VCANP13611 PPFIA2-201ENST00000333447 5517 ntTSL 5 BASIC3.8□□□□□ -1.8
VCANP13611 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
VCANP13611 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
VCANP13611 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
VCANP13611 DIO2-201ENST00000422005 6272 ntTSL 5 BASIC3.8□□□□□ -1.8
VCANP13611 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC3.8□□□□□ -1.8
VCANP13611 AL353608.1-201ENST00000419576 416 ntTSL 5 BASIC3.8□□□□□ -1.8
VCANP13611 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC3.8□□□□□ -1.8
VCANP13611 RPF2P1-201ENST00000424137 906 ntBASIC3.8□□□□□ -1.8
VCANP13611 HIGD1AP4-201ENST00000430194 280 ntBASIC3.8□□□□□ -1.8
VCANP13611 AC133134.1-201ENST00000466800 359 ntBASIC3.8□□□□□ -1.8
VCANP13611 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.8□□□□□ -1.8
VCANP13611 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.8□□□□□ -1.8
VCANP13611 ZNFX1-AS1_2.1-201ENST00000610973 93 ntBASIC3.8□□□□□ -1.8
VCANP13611 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
VCANP13611 CCDC169-204ENST00000379864 5944 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
VCANP13611 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
VCANP13611 MAP2-207ENST00000447185 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
VCANP13611 PRNCR1-201ENST00000635449 12727 ntBASIC3.8□□□□□ -1.8
VCANP13611 AC007656.2-201ENST00000624902 4547 ntBASIC3.8□□□□□ -1.8
VCANP13611 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
VCANP13611 ATP5F1P6-201ENST00000402768 767 ntBASIC3.8□□□□□ -1.8
VCANP13611 HMGB1P5-202ENST00000451497 985 ntBASIC3.8□□□□□ -1.8
VCANP13611 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC3.8□□□□□ -1.8
VCANP13611 HNRNPDLP4-201ENST00000605144 301 ntBASIC3.8□□□□□ -1.8
VCANP13611 AC084816.1-212ENST00000625240 1114 ntTSL 5 BASIC3.8□□□□□ -1.8
VCANP13611 IBTK-201ENST00000306270 6054 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
VCANP13611 TMEM2-205ENST00000377066 5217 ntAPPRIS ALT1 TSL 1 (best) BASIC3.8□□□□□ -1.8
VCANP13611 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC3.8□□□□□ -1.8
VCANP13611 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.8□□□□□ -1.8
VCANP13611 UBE2U-201ENST00000371076 1136 ntAPPRIS P2 TSL 1 (best) BASIC3.79□□□□□ -1.8
VCANP13611 MIR199A2-201ENST00000385289 110 ntBASIC3.79□□□□□ -1.8
VCANP13611 RPS4XP8-201ENST00000402039 771 ntBASIC3.79□□□□□ -1.8
VCANP13611 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
VCANP13611 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC3.79□□□□□ -1.8
VCANP13611 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC3.79□□□□□ -1.8
VCANP13611 RPL23AP65-201ENST00000475608 468 ntBASIC3.79□□□□□ -1.8
VCANP13611 AL035404.1-201ENST00000497982 568 ntBASIC3.79□□□□□ -1.8
VCANP13611 AC010591.1-201ENST00000603941 649 ntBASIC3.79□□□□□ -1.8
VCANP13611 AC026368.1-201ENST00000614934 690 ntBASIC3.79□□□□□ -1.8
VCANP13611 TOGARAM2-201ENST00000379558 12691 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
VCANP13611 SCIN-201ENST00000297029 9713 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
VCANP13611 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
VCANP13611 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
VCANP13611 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
VCANP13611 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC3.79□□□□□ -1.8
VCANP13611 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC3.79□□□□□ -1.8
VCANP13611 AP003175.1-201ENST00000641383 6658 ntBASIC3.79□□□□□ -1.8
VCANP13611 OR5J1P-201ENST00000313544 939 ntBASIC3.79□□□□□ -1.8
VCANP13611 OR6K4P-201ENST00000423179 955 ntBASIC3.79□□□□□ -1.8
VCANP13611 RPL23AP69-201ENST00000431134 458 ntBASIC3.79□□□□□ -1.8
VCANP13611 AC013714.1-201ENST00000524707 747 ntTSL 3 BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms