Protein–RNA interactions for Protein: O75056

SDC3, Syndecan-3, humanhuman

Predictions only

Length 442 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3O75056 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SDC3O75056 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.29□□□□□ -1.72
SDC3O75056 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
SDC3O75056 AL122126.1-201ENST00000546905 1318 ntBASIC4.29□□□□□ -1.72
SDC3O75056 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SDC3O75056 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SDC3O75056 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
SDC3O75056 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SDC3O75056 OR13G1-201ENST00000359688 1046 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
SDC3O75056 SNORA62.2-201ENST00000364672 152 ntBASIC4.29□□□□□ -1.72
SDC3O75056 AL359837.1-201ENST00000381357 287 ntBASIC4.29□□□□□ -1.72
SDC3O75056 MIR23B-201ENST00000384832 97 ntBASIC4.29□□□□□ -1.72
SDC3O75056 MIR3065-201ENST00000390137 79 ntBASIC4.29□□□□□ -1.72
SDC3O75056 UBE2V1P15-201ENST00000407776 448 ntBASIC4.29□□□□□ -1.72
SDC3O75056 SNORA11F-201ENST00000408237 128 ntBASIC4.29□□□□□ -1.72
SDC3O75056 AC009237.10-201ENST00000414112 510 ntBASIC4.29□□□□□ -1.72
SDC3O75056 OR2X1P-201ENST00000421144 687 ntBASIC4.29□□□□□ -1.72
SDC3O75056 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SDC3O75056 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SDC3O75056 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC4.29□□□□□ -1.72
SDC3O75056 RPL7P33-201ENST00000444159 742 ntBASIC4.29□□□□□ -1.72
SDC3O75056 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.29□□□□□ -1.72
SDC3O75056 AC044797.1-201ENST00000445744 679 ntBASIC4.29□□□□□ -1.72
SDC3O75056 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC4.29□□□□□ -1.72
SDC3O75056 AC093663.2-201ENST00000484625 313 ntBASIC4.29□□□□□ -1.72
SDC3O75056 RPL35P6-201ENST00000490024 372 ntBASIC4.29□□□□□ -1.72
SDC3O75056 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.29□□□□□ -1.72
SDC3O75056 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.29□□□□□ -1.72
SDC3O75056 AC008958.1-201ENST00000511047 682 ntBASIC4.29□□□□□ -1.72
SDC3O75056 AP003168.1-201ENST00000530091 307 ntBASIC4.29□□□□□ -1.72
SDC3O75056 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC4.29□□□□□ -1.72
SDC3O75056 NOP56P3-201ENST00000549457 385 ntBASIC4.29□□□□□ -1.72
SDC3O75056 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC4.29□□□□□ -1.72
SDC3O75056 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.29□□□□□ -1.72
SDC3O75056 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC4.29□□□□□ -1.72
SDC3O75056 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SDC3O75056 AC022916.3-201ENST00000592961 742 ntBASIC4.29□□□□□ -1.72
SDC3O75056 AL096803.3-201ENST00000609032 532 ntBASIC4.29□□□□□ -1.72
SDC3O75056 AC243654.2-201ENST00000612843 443 ntBASIC4.29□□□□□ -1.72
SDC3O75056 MIR492-201ENST00000638676 116 ntBASIC4.29□□□□□ -1.72
SDC3O75056 AL672167.1-203ENST00000641299 2975 ntBASIC4.29□□□□□ -1.72
SDC3O75056 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.29□□□□□ -1.72
SDC3O75056 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.29□□□□□ -1.72
SDC3O75056 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
SDC3O75056 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SDC3O75056 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
SDC3O75056 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
SDC3O75056 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.28□□□□□ -1.72
SDC3O75056 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SDC3O75056 AL133243.3-201ENST00000617415 3004 ntBASIC4.28□□□□□ -1.72
SDC3O75056 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.28□□□□□ -1.72
SDC3O75056 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
SDC3O75056 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
SDC3O75056 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
SDC3O75056 RNA5SP283-201ENST00000365604 119 ntBASIC4.28□□□□□ -1.72
SDC3O75056 RNU6-317P-201ENST00000384031 107 ntBASIC4.28□□□□□ -1.72
SDC3O75056 GSTM3P2-201ENST00000412746 530 ntBASIC4.28□□□□□ -1.72
SDC3O75056 RPS12P5-201ENST00000423449 371 ntBASIC4.28□□□□□ -1.72
SDC3O75056 CBX1P4-201ENST00000439415 457 ntBASIC4.28□□□□□ -1.72
SDC3O75056 UBE2V1P3-201ENST00000439651 417 ntBASIC4.28□□□□□ -1.72
SDC3O75056 AL691517.1-201ENST00000440833 1235 ntBASIC4.28□□□□□ -1.72
SDC3O75056 AC006326.1-201ENST00000445465 787 ntBASIC4.28□□□□□ -1.72
SDC3O75056 MTND2P25-201ENST00000449028 610 ntBASIC4.28□□□□□ -1.72
SDC3O75056 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.28□□□□□ -1.72
SDC3O75056 IFNWP4-201ENST00000453148 294 ntBASIC4.28□□□□□ -1.72
SDC3O75056 CABYRP1-201ENST00000465493 1045 ntBASIC4.28□□□□□ -1.72
SDC3O75056 AC091153.1-201ENST00000466297 402 ntBASIC4.28□□□□□ -1.72
SDC3O75056 ATP1B1P1-201ENST00000509767 915 ntBASIC4.28□□□□□ -1.72
SDC3O75056 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SDC3O75056 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC4.28□□□□□ -1.72
SDC3O75056 SETP12-201ENST00000514068 805 ntBASIC4.28□□□□□ -1.72
SDC3O75056 RNA5SP49-201ENST00000516450 115 ntBASIC4.28□□□□□ -1.72
SDC3O75056 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.28□□□□□ -1.72
SDC3O75056 AC113423.1-201ENST00000523279 289 ntTSL 3 BASIC4.28□□□□□ -1.72
SDC3O75056 OR5BC1P-201ENST00000529327 739 ntBASIC4.28□□□□□ -1.72
SDC3O75056 PDCD5P1-201ENST00000543528 309 ntBASIC4.28□□□□□ -1.72
SDC3O75056 OR8R1P-201ENST00000543943 764 ntBASIC4.28□□□□□ -1.72
SDC3O75056 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC4.28□□□□□ -1.72
SDC3O75056 AC107032.2-201ENST00000551082 386 ntTSL 3 BASIC4.28□□□□□ -1.72
SDC3O75056 CKS1BP1-201ENST00000555221 240 ntBASIC4.28□□□□□ -1.72
SDC3O75056 HMGB3P26-201ENST00000560051 582 ntBASIC4.28□□□□□ -1.72
SDC3O75056 LINC00557-201ENST00000563184 1279 ntBASIC4.28□□□□□ -1.72
SDC3O75056 AC034105.4-201ENST00000568304 277 ntBASIC4.28□□□□□ -1.72
SDC3O75056 AC005242.1-201ENST00000585658 438 ntBASIC4.28□□□□□ -1.72
SDC3O75056 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.28□□□□□ -1.72
SDC3O75056 AC090181.2-201ENST00000602975 672 ntBASIC4.28□□□□□ -1.72
SDC3O75056 OR4H6P-202ENST00000603819 340 ntBASIC4.28□□□□□ -1.72
SDC3O75056 SUMO2P14-201ENST00000604488 293 ntBASIC4.28□□□□□ -1.72
SDC3O75056 AL354984.3-201ENST00000604803 325 ntBASIC4.28□□□□□ -1.72
SDC3O75056 AC015849.2-201ENST00000605738 409 ntBASIC4.28□□□□□ -1.72
SDC3O75056 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SDC3O75056 AC073592.7-201ENST00000623659 507 ntBASIC4.28□□□□□ -1.72
SDC3O75056 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.28□□□□□ -1.72
SDC3O75056 BMS1P21-201ENST00000634565 365 ntBASIC4.28□□□□□ -1.72
SDC3O75056 METTL8-218ENST00000638989 876 ntTSL 5 BASIC4.28□□□□□ -1.72
SDC3O75056 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.28□□□□□ -1.72
SDC3O75056 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SDC3O75056 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
SDC3O75056 KYNU-201ENST00000264170 15316 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SDC3O75056 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 463.1 ms