Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SSSCA1O60232 CR788268.1-201ENST00000603931 1809 ntBASIC3.08□□□□□ -1.92
SSSCA1O60232 AC007685.1-201ENST00000329806 452 ntBASIC3.08□□□□□ -1.92
SSSCA1O60232 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
SSSCA1O60232 MIR383-201ENST00000362257 73 ntBASIC3.08□□□□□ -1.92
SSSCA1O60232 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
SSSCA1O60232 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
SSSCA1O60232 RPS16P5-201ENST00000406501 404 ntBASIC3.08□□□□□ -1.92
SSSCA1O60232 AMZ2P2-201ENST00000406819 1057 ntBASIC3.08□□□□□ -1.92
SSSCA1O60232 SNORA11.5-201ENST00000408163 128 ntBASIC3.08□□□□□ -1.92
SSSCA1O60232 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.08□□□□□ -1.92
SSSCA1O60232 TPT1P2-201ENST00000413105 503 ntBASIC3.08□□□□□ -1.92
SSSCA1O60232 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.08□□□□□ -1.92
SSSCA1O60232 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC3.08□□□□□ -1.92
SSSCA1O60232 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC3.08□□□□□ -1.92
SSSCA1O60232 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SSSCA1O60232 AC022431.1-201ENST00000450941 438 ntBASIC3.08□□□□□ -1.92
SSSCA1O60232 Z95152.1-201ENST00000453556 656 ntBASIC3.08□□□□□ -1.92
SSSCA1O60232 NPM1P17-201ENST00000479221 602 ntBASIC3.08□□□□□ -1.92
SSSCA1O60232 AC041039.1-201ENST00000485656 536 ntBASIC3.08□□□□□ -1.92
SSSCA1O60232 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC3.08□□□□□ -1.92
SSSCA1O60232 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.08□□□□□ -1.92
SSSCA1O60232 AC008802.1-201ENST00000519121 791 ntBASIC3.08□□□□□ -1.92
SSSCA1O60232 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.08□□□□□ -1.92
SSSCA1O60232 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SSSCA1O60232 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC3.08□□□□□ -1.92
SSSCA1O60232 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.08□□□□□ -1.92
SSSCA1O60232 AC069234.2-201ENST00000541383 575 ntTSL 3 BASIC3.08□□□□□ -1.92
SSSCA1O60232 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.08□□□□□ -1.92
SSSCA1O60232 NPM1P47-201ENST00000560843 856 ntBASIC3.08□□□□□ -1.92
SSSCA1O60232 MIR4738-201ENST00000579134 87 ntBASIC3.08□□□□□ -1.92
SSSCA1O60232 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.08□□□□□ -1.92
SSSCA1O60232 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.08□□□□□ -1.92
SSSCA1O60232 SNX6P1-201ENST00000601728 1224 ntBASIC3.08□□□□□ -1.92
SSSCA1O60232 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC3.08□□□□□ -1.92
SSSCA1O60232 AC010680.3-201ENST00000604215 520 ntBASIC3.08□□□□□ -1.92
SSSCA1O60232 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.08□□□□□ -1.92
SSSCA1O60232 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.08□□□□□ -1.92
SSSCA1O60232 AL159169.2-201ENST00000610061 1269 ntBASIC3.08□□□□□ -1.92
SSSCA1O60232 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.08□□□□□ -1.92
SSSCA1O60232 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC3.08□□□□□ -1.92
SSSCA1O60232 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SSSCA1O60232 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
SSSCA1O60232 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC3.08□□□□□ -1.92
SSSCA1O60232 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC3.08□□□□□ -1.92
SSSCA1O60232 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SSSCA1O60232 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
SSSCA1O60232 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SSSCA1O60232 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.07□□□□□ -1.92
SSSCA1O60232 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SSSCA1O60232 AL451142.2-201ENST00000429076 2090 ntBASIC3.07□□□□□ -1.92
SSSCA1O60232 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SSSCA1O60232 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
SSSCA1O60232 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SSSCA1O60232 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.07□□□□□ -1.92
SSSCA1O60232 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
SSSCA1O60232 RNA5SP447-201ENST00000363749 119 ntBASIC3.07□□□□□ -1.92
SSSCA1O60232 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC3.07□□□□□ -1.92
SSSCA1O60232 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SSSCA1O60232 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SSSCA1O60232 RNU6-1263P-201ENST00000384601 106 ntBASIC3.07□□□□□ -1.92
SSSCA1O60232 AL035419.1-201ENST00000397037 564 ntBASIC3.07□□□□□ -1.92
SSSCA1O60232 AC108032.1-201ENST00000416706 207 ntBASIC3.07□□□□□ -1.92
SSSCA1O60232 LINC01752-201ENST00000417299 438 ntTSL 2 BASIC3.07□□□□□ -1.92
SSSCA1O60232 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.07□□□□□ -1.92
SSSCA1O60232 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.07□□□□□ -1.92
SSSCA1O60232 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC3.07□□□□□ -1.92
SSSCA1O60232 AL513533.1-201ENST00000453728 415 ntBASIC3.07□□□□□ -1.92
SSSCA1O60232 snoU13.1-201ENST00000459157 104 ntBASIC3.07□□□□□ -1.92
SSSCA1O60232 PPIAP15-201ENST00000479662 484 ntBASIC3.07□□□□□ -1.92
SSSCA1O60232 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SSSCA1O60232 RAC1P2-201ENST00000511164 579 ntBASIC3.07□□□□□ -1.92
SSSCA1O60232 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.07□□□□□ -1.92
SSSCA1O60232 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC3.07□□□□□ -1.92
SSSCA1O60232 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
SSSCA1O60232 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC3.07□□□□□ -1.92
SSSCA1O60232 AL445363.1-202ENST00000553697 545 ntTSL 3 BASIC3.07□□□□□ -1.92
SSSCA1O60232 AC068831.4-201ENST00000556118 109 ntBASIC3.07□□□□□ -1.92
SSSCA1O60232 PSMB7P1-201ENST00000556349 514 ntBASIC3.07□□□□□ -1.92
SSSCA1O60232 MIR4480-201ENST00000582492 71 ntBASIC3.07□□□□□ -1.92
SSSCA1O60232 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.07□□□□□ -1.92
SSSCA1O60232 AC008121.2-201ENST00000614647 523 ntBASIC3.07□□□□□ -1.92
SSSCA1O60232 CCL4L2-215ENST00000620055 537 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SSSCA1O60232 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
SSSCA1O60232 AC000123.2-201ENST00000623124 461 ntBASIC3.07□□□□□ -1.92
SSSCA1O60232 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC3.07□□□□□ -1.92
SSSCA1O60232 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
SSSCA1O60232 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC3.07□□□□□ -1.92
SSSCA1O60232 CIR1P2-201ENST00000514821 1342 ntBASIC3.07□□□□□ -1.92
SSSCA1O60232 LARP1BP1-201ENST00000506036 1359 ntBASIC3.07□□□□□ -1.92
SSSCA1O60232 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SSSCA1O60232 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC3.07□□□□□ -1.92
SSSCA1O60232 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
SSSCA1O60232 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.07□□□□□ -1.92
SSSCA1O60232 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
SSSCA1O60232 DCUN1D1-201ENST00000292782 7954 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SSSCA1O60232 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.06□□□□□ -1.92
SSSCA1O60232 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
SSSCA1O60232 MIR199A2-201ENST00000385289 110 ntBASIC3.06□□□□□ -1.92
SSSCA1O60232 AL136116.1-201ENST00000403591 381 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 132.8 ms