Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CUX2O14529 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CUX2O14529 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CUX2O14529 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
CUX2O14529 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
CUX2O14529 AL353743.1-202ENST00000431724 1695 ntBASIC6.8□□□□□ -1.32
CUX2O14529 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
CUX2O14529 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CUX2O14529 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC6.8□□□□□ -1.32
CUX2O14529 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC6.8□□□□□ -1.32
CUX2O14529 Z97055.1-201ENST00000419730 712 ntBASIC6.8□□□□□ -1.32
CUX2O14529 AC004448.2-201ENST00000422360 586 ntBASIC6.8□□□□□ -1.32
CUX2O14529 DNAJA1P1-201ENST00000425106 1187 ntBASIC6.8□□□□□ -1.32
CUX2O14529 AC008065.1-201ENST00000428525 348 ntBASIC6.8□□□□□ -1.32
CUX2O14529 TMED11P-201ENST00000479478 690 ntBASIC6.8□□□□□ -1.32
CUX2O14529 RPS3AP6-201ENST00000484430 795 ntBASIC6.8□□□□□ -1.32
CUX2O14529 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC6.8□□□□□ -1.32
CUX2O14529 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC6.8□□□□□ -1.32
CUX2O14529 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC6.8□□□□□ -1.32
CUX2O14529 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC6.8□□□□□ -1.32
CUX2O14529 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CUX2O14529 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CUX2O14529 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC6.8□□□□□ -1.32
CUX2O14529 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC6.8□□□□□ -1.32
CUX2O14529 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CUX2O14529 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CUX2O14529 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
CUX2O14529 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC6.8□□□□□ -1.32
CUX2O14529 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.79□□□□□ -1.32
CUX2O14529 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC6.79□□□□□ -1.32
CUX2O14529 AC112198.2-201ENST00000426589 6996 ntBASIC6.79□□□□□ -1.32
CUX2O14529 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CUX2O14529 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CUX2O14529 RNA5SP50-201ENST00000363731 107 ntBASIC6.79□□□□□ -1.32
CUX2O14529 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC6.79□□□□□ -1.32
CUX2O14529 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC6.79□□□□□ -1.32
CUX2O14529 RPS26P2-201ENST00000440331 348 ntBASIC6.79□□□□□ -1.32
CUX2O14529 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC6.79□□□□□ -1.32
CUX2O14529 TRAPPC2P2-201ENST00000517589 409 ntBASIC6.79□□□□□ -1.32
CUX2O14529 AL157394.1-201ENST00000562983 1224 ntBASIC6.79□□□□□ -1.32
CUX2O14529 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC6.79□□□□□ -1.32
CUX2O14529 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CUX2O14529 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC6.79□□□□□ -1.32
CUX2O14529 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CUX2O14529 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC6.79□□□□□ -1.32
CUX2O14529 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
CUX2O14529 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
CUX2O14529 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC6.79□□□□□ -1.32
CUX2O14529 OR6K3-202ENST00000368146 996 ntBASIC6.79□□□□□ -1.32
CUX2O14529 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC6.79□□□□□ -1.32
CUX2O14529 AC010342.1-201ENST00000514047 877 ntBASIC6.79□□□□□ -1.32
CUX2O14529 AC090151.1-201ENST00000520784 730 ntBASIC6.79□□□□□ -1.32
CUX2O14529 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC6.79□□□□□ -1.32
CUX2O14529 AC244505.7-201ENST00000599675 272 ntBASIC6.79□□□□□ -1.32
CUX2O14529 CDY11P-201ENST00000447168 1651 ntBASIC6.78□□□□□ -1.32
CUX2O14529 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
CUX2O14529 SNORA80A-201ENST00000363922 136 ntBASIC6.78□□□□□ -1.32
CUX2O14529 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC6.78□□□□□ -1.32
CUX2O14529 MTND6P32-201ENST00000457611 483 ntBASIC6.78□□□□□ -1.32
CUX2O14529 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC6.78□□□□□ -1.32
CUX2O14529 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC6.78□□□□□ -1.32
CUX2O14529 SNORA70.17-201ENST00000516449 133 ntBASIC6.78□□□□□ -1.32
CUX2O14529 RAD21-204ENST00000518055 896 ntTSL 2 BASIC6.78□□□□□ -1.32
CUX2O14529 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC6.78□□□□□ -1.32
CUX2O14529 AC026368.1-201ENST00000614934 690 ntBASIC6.78□□□□□ -1.32
CUX2O14529 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC6.78□□□□□ -1.32
CUX2O14529 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC6.78□□□□□ -1.32
CUX2O14529 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.32
CUX2O14529 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CUX2O14529 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
CUX2O14529 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC6.77□□□□□ -1.33
CUX2O14529 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC6.77□□□□□ -1.33
CUX2O14529 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC6.77□□□□□ -1.33
CUX2O14529 AL356274.2-201ENST00000624379 3752 ntBASIC6.77□□□□□ -1.33
CUX2O14529 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CUX2O14529 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC6.77□□□□□ -1.33
CUX2O14529 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC6.77□□□□□ -1.33
CUX2O14529 DARS-AS1-206ENST00000446492 488 ntTSL 3 BASIC6.77□□□□□ -1.33
CUX2O14529 RPS27AP15-201ENST00000447672 466 ntBASIC6.77□□□□□ -1.33
CUX2O14529 RSL24D1P3-201ENST00000449255 495 ntBASIC6.77□□□□□ -1.33
CUX2O14529 RNA5SP103-201ENST00000459503 118 ntBASIC6.77□□□□□ -1.33
CUX2O14529 AC004924.1-201ENST00000480160 781 ntBASIC6.77□□□□□ -1.33
CUX2O14529 IGHV3-32-201ENST00000519182 355 ntBASIC6.77□□□□□ -1.33
CUX2O14529 COX6B1P6-201ENST00000522347 255 ntBASIC6.77□□□□□ -1.33
CUX2O14529 AP001284.1-201ENST00000528393 2118 ntBASIC6.77□□□□□ -1.33
CUX2O14529 TRDN-204ENST00000542443 1294 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CUX2O14529 AC027176.2-201ENST00000559166 746 ntBASIC6.77□□□□□ -1.33
CUX2O14529 AL049840.6-202ENST00000603373 279 ntBASIC6.77□□□□□ -1.33
CUX2O14529 AC073530.2-201ENST00000623987 261 ntBASIC6.77□□□□□ -1.33
CUX2O14529 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC6.77□□□□□ -1.33
CUX2O14529 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
CUX2O14529 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC6.77□□□□□ -1.33
CUX2O14529 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
CUX2O14529 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
CUX2O14529 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC6.76□□□□□ -1.33
CUX2O14529 AC139426.3-201ENST00000605648 2059 ntBASIC6.76□□□□□ -1.33
CUX2O14529 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC6.76□□□□□ -1.33
CUX2O14529 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC6.76□□□□□ -1.33
CUX2O14529 VDAC1P9-201ENST00000412766 841 ntBASIC6.76□□□□□ -1.33
CUX2O14529 AC005019.1-201ENST00000436455 431 ntBASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 119.7 ms