Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 RNU6-362P-201ENST00000516736 90 ntBASIC4.79□□□□□ -1.64
DDX39AO00148 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
DDX39AO00148 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.79□□□□□ -1.64
DDX39AO00148 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.79□□□□□ -1.64
DDX39AO00148 AC106785.3-201ENST00000564064 847 ntBASIC4.79□□□□□ -1.64
DDX39AO00148 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC4.79□□□□□ -1.64
DDX39AO00148 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC4.79□□□□□ -1.64
DDX39AO00148 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC4.79□□□□□ -1.64
DDX39AO00148 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
DDX39AO00148 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC4.79□□□□□ -1.64
DDX39AO00148 MMP13-203ENST00000615555 1152 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
DDX39AO00148 ZYXP1-201ENST00000617638 118 ntBASIC4.79□□□□□ -1.64
DDX39AO00148 U6.48-201ENST00000618523 106 ntBASIC4.79□□□□□ -1.64
DDX39AO00148 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
DDX39AO00148 AC140113.4-201ENST00000622087 222 ntBASIC4.79□□□□□ -1.64
DDX39AO00148 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC4.79□□□□□ -1.64
DDX39AO00148 LGI1-209ENST00000627699 664 ntTSL 3 BASIC4.79□□□□□ -1.64
DDX39AO00148 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
DDX39AO00148 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
DDX39AO00148 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
DDX39AO00148 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
DDX39AO00148 PJA2-202ENST00000361557 4645 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
DDX39AO00148 Z73965.1-201ENST00000623412 2297 ntBASIC4.79□□□□□ -1.64
DDX39AO00148 SPATA31D2P-201ENST00000429999 4388 ntBASIC4.79□□□□□ -1.64
DDX39AO00148 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.78□□□□□ -1.64
DDX39AO00148 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
DDX39AO00148 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.78□□□□□ -1.64
DDX39AO00148 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
DDX39AO00148 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
DDX39AO00148 RNA5SP28-201ENST00000363841 119 ntBASIC4.78□□□□□ -1.64
DDX39AO00148 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
DDX39AO00148 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
DDX39AO00148 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
DDX39AO00148 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
DDX39AO00148 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC4.78□□□□□ -1.64
DDX39AO00148 AL035458.1-201ENST00000433096 585 ntBASIC4.78□□□□□ -1.64
DDX39AO00148 BTF3P10-201ENST00000433415 495 ntBASIC4.78□□□□□ -1.64
DDX39AO00148 AL132765.1-201ENST00000434165 553 ntBASIC4.78□□□□□ -1.64
DDX39AO00148 RPL7P31-201ENST00000450192 724 ntBASIC4.78□□□□□ -1.64
DDX39AO00148 RPS20P4-201ENST00000461659 355 ntBASIC4.78□□□□□ -1.64
DDX39AO00148 RPS29P19-201ENST00000479709 171 ntBASIC4.78□□□□□ -1.64
DDX39AO00148 SSBP1-211ENST00000484178 676 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
DDX39AO00148 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.78□□□□□ -1.64
DDX39AO00148 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.78□□□□□ -1.64
DDX39AO00148 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC4.78□□□□□ -1.64
DDX39AO00148 TOMM20P2-201ENST00000540082 421 ntBASIC4.78□□□□□ -1.64
DDX39AO00148 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.78□□□□□ -1.64
DDX39AO00148 AC051619.4-201ENST00000560034 292 ntTSL 5 BASIC4.78□□□□□ -1.64
DDX39AO00148 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.78□□□□□ -1.64
DDX39AO00148 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC4.78□□□□□ -1.64
DDX39AO00148 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC4.78□□□□□ -1.64
DDX39AO00148 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
DDX39AO00148 AC067959.1-201ENST00000604334 379 ntBASIC4.78□□□□□ -1.64
DDX39AO00148 FAM27D1-201ENST00000612308 341 ntBASIC4.78□□□□□ -1.64
DDX39AO00148 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC4.78□□□□□ -1.64
DDX39AO00148 USP9YP4-201ENST00000424401 1745 ntBASIC4.77□□□□□ -1.65
DDX39AO00148 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
DDX39AO00148 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
DDX39AO00148 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.77□□□□□ -1.65
DDX39AO00148 MTND4P31-201ENST00000425607 1343 ntBASIC4.77□□□□□ -1.65
DDX39AO00148 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
DDX39AO00148 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
DDX39AO00148 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
DDX39AO00148 AC092162.3-201ENST00000624511 1624 ntBASIC4.77□□□□□ -1.65
DDX39AO00148 OR52B1P-201ENST00000316506 909 ntBASIC4.77□□□□□ -1.65
DDX39AO00148 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
DDX39AO00148 RNU1-94P-201ENST00000362627 173 ntBASIC4.77□□□□□ -1.65
DDX39AO00148 RNU1-20P-201ENST00000363314 162 ntBASIC4.77□□□□□ -1.65
DDX39AO00148 RN7SKP227-201ENST00000364445 330 ntBASIC4.77□□□□□ -1.65
DDX39AO00148 RNA5SP22-201ENST00000365393 109 ntBASIC4.77□□□□□ -1.65
DDX39AO00148 AL022722.2-201ENST00000402519 180 ntBASIC4.77□□□□□ -1.65
DDX39AO00148 AL359643.1-201ENST00000404109 423 ntBASIC4.77□□□□□ -1.65
DDX39AO00148 HMGB1P13-201ENST00000406019 642 ntBASIC4.77□□□□□ -1.65
DDX39AO00148 RNA5SP317-201ENST00000410176 116 ntBASIC4.77□□□□□ -1.65
DDX39AO00148 RN7SKP182-201ENST00000410772 298 ntBASIC4.77□□□□□ -1.65
DDX39AO00148 RNA5SP311-201ENST00000411290 116 ntBASIC4.77□□□□□ -1.65
DDX39AO00148 MTCO3P4-201ENST00000419236 787 ntBASIC4.77□□□□□ -1.65
DDX39AO00148 MTND4LP7-201ENST00000431728 294 ntBASIC4.77□□□□□ -1.65
DDX39AO00148 RSL24D1P8-201ENST00000434442 492 ntBASIC4.77□□□□□ -1.65
DDX39AO00148 OR4C10P-201ENST00000434991 931 ntBASIC4.77□□□□□ -1.65
DDX39AO00148 AC092447.2-201ENST00000435487 669 ntBASIC4.77□□□□□ -1.65
DDX39AO00148 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.77□□□□□ -1.65
DDX39AO00148 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.77□□□□□ -1.65
DDX39AO00148 AC114755.5-201ENST00000447760 831 ntBASIC4.77□□□□□ -1.65
DDX39AO00148 RPL23AP81-201ENST00000455252 467 ntBASIC4.77□□□□□ -1.65
DDX39AO00148 TPRKBP1-201ENST00000456243 481 ntBASIC4.77□□□□□ -1.65
DDX39AO00148 AC012158.1-204ENST00000483430 465 ntBASIC4.77□□□□□ -1.65
DDX39AO00148 AC023050.1-201ENST00000498198 304 ntBASIC4.77□□□□□ -1.65
DDX39AO00148 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC4.77□□□□□ -1.65
DDX39AO00148 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.77□□□□□ -1.65
DDX39AO00148 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.77□□□□□ -1.65
DDX39AO00148 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.77□□□□□ -1.65
DDX39AO00148 RNA5SP315-201ENST00000516340 116 ntBASIC4.77□□□□□ -1.65
DDX39AO00148 RN7SKP21-201ENST00000516503 220 ntBASIC4.77□□□□□ -1.65
DDX39AO00148 SNORA31.13-201ENST00000516624 135 ntBASIC4.77□□□□□ -1.65
DDX39AO00148 RNA5SP312-201ENST00000517068 116 ntBASIC4.77□□□□□ -1.65
DDX39AO00148 AC090151.1-201ENST00000520784 730 ntBASIC4.77□□□□□ -1.65
DDX39AO00148 AC004923.2-201ENST00000529649 369 ntBASIC4.77□□□□□ -1.65
DDX39AO00148 AC006064.5-201ENST00000541782 248 ntBASIC4.77□□□□□ -1.65
DDX39AO00148 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms