Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 OR56B2P-201ENST00000317102 954 ntBASIC4.12□□□□□ -1.75
NPIPA2E9PIF3 RNA5SP502-201ENST00000362694 119 ntBASIC4.12□□□□□ -1.75
NPIPA2E9PIF3 RNA5SP28-201ENST00000363841 119 ntBASIC4.12□□□□□ -1.75
NPIPA2E9PIF3 RNA5SP509-201ENST00000364577 119 ntBASIC4.12□□□□□ -1.75
NPIPA2E9PIF3 RNU6-650P-201ENST00000365658 111 ntBASIC4.12□□□□□ -1.75
NPIPA2E9PIF3 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
NPIPA2E9PIF3 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.12□□□□□ -1.75
NPIPA2E9PIF3 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC4.12□□□□□ -1.75
NPIPA2E9PIF3 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.12□□□□□ -1.75
NPIPA2E9PIF3 RNU2-17P-201ENST00000410290 190 ntBASIC4.12□□□□□ -1.75
NPIPA2E9PIF3 RNU2-72P-201ENST00000411175 163 ntBASIC4.12□□□□□ -1.75
NPIPA2E9PIF3 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.12□□□□□ -1.75
NPIPA2E9PIF3 AL133419.1-201ENST00000423153 640 ntTSL 3 BASIC4.12□□□□□ -1.75
NPIPA2E9PIF3 AL353093.1-201ENST00000441292 436 ntBASIC4.12□□□□□ -1.75
NPIPA2E9PIF3 AL672167.1-201ENST00000441381 464 ntTSL 3 BASIC4.12□□□□□ -1.75
NPIPA2E9PIF3 TDGF1P1-201ENST00000445734 527 ntBASIC4.12□□□□□ -1.75
NPIPA2E9PIF3 RPS20P4-201ENST00000461659 355 ntBASIC4.12□□□□□ -1.75
NPIPA2E9PIF3 AC108751.2-201ENST00000469993 231 ntBASIC4.12□□□□□ -1.75
NPIPA2E9PIF3 AC109327.1-201ENST00000471666 403 ntBASIC4.12□□□□□ -1.75
NPIPA2E9PIF3 AC103987.1-201ENST00000473394 348 ntBASIC4.12□□□□□ -1.75
NPIPA2E9PIF3 S100A11P1-201ENST00000477525 312 ntBASIC4.12□□□□□ -1.75
NPIPA2E9PIF3 PLSCR5-202ENST00000482567 1018 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
NPIPA2E9PIF3 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC4.12□□□□□ -1.75
NPIPA2E9PIF3 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.12□□□□□ -1.75
NPIPA2E9PIF3 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC4.12□□□□□ -1.75
NPIPA2E9PIF3 AC023050.1-201ENST00000498198 304 ntBASIC4.12□□□□□ -1.75
NPIPA2E9PIF3 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.12□□□□□ -1.75
NPIPA2E9PIF3 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.12□□□□□ -1.75
NPIPA2E9PIF3 AC106806.2-201ENST00000509365 500 ntBASIC4.12□□□□□ -1.75
NPIPA2E9PIF3 RN7SKP122-201ENST00000515923 296 ntBASIC4.12□□□□□ -1.75
NPIPA2E9PIF3 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC4.12□□□□□ -1.75
NPIPA2E9PIF3 AC090281.1-201ENST00000523019 276 ntBASIC4.12□□□□□ -1.75
NPIPA2E9PIF3 AL451137.1-201ENST00000523363 443 ntTSL 3 BASIC4.12□□□□□ -1.75
NPIPA2E9PIF3 AC095350.2-201ENST00000544034 201 ntTSL 5 BASIC4.12□□□□□ -1.75
NPIPA2E9PIF3 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.12□□□□□ -1.75
NPIPA2E9PIF3 POLR2KP1-201ENST00000553226 168 ntBASIC4.12□□□□□ -1.75
NPIPA2E9PIF3 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.12□□□□□ -1.75
NPIPA2E9PIF3 AC068831.4-201ENST00000556118 109 ntBASIC4.12□□□□□ -1.75
NPIPA2E9PIF3 MTND4LP24-201ENST00000572277 291 ntBASIC4.12□□□□□ -1.75
NPIPA2E9PIF3 NF1P5-201ENST00000588287 448 ntBASIC4.12□□□□□ -1.75
NPIPA2E9PIF3 AC115085.1-201ENST00000588924 229 ntBASIC4.12□□□□□ -1.75
NPIPA2E9PIF3 ZNF92P2-201ENST00000600543 1059 ntBASIC4.12□□□□□ -1.75
NPIPA2E9PIF3 AC115286.1-201ENST00000604298 434 ntBASIC4.12□□□□□ -1.75
NPIPA2E9PIF3 AC091979.2-201ENST00000607514 214 ntBASIC4.12□□□□□ -1.75
NPIPA2E9PIF3 AC012409.3-201ENST00000611343 981 ntBASIC4.12□□□□□ -1.75
NPIPA2E9PIF3 AC005962.2-201ENST00000611427 652 ntBASIC4.12□□□□□ -1.75
NPIPA2E9PIF3 AL121890.3-201ENST00000618494 516 ntBASIC4.12□□□□□ -1.75
NPIPA2E9PIF3 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.12□□□□□ -1.75
NPIPA2E9PIF3 AC011944.2-201ENST00000624440 683 ntBASIC4.12□□□□□ -1.75
NPIPA2E9PIF3 VIPR1-AS1-223ENST00000627073 451 ntTSL 5 BASIC4.12□□□□□ -1.75
NPIPA2E9PIF3 FRG1DP-201ENST00000635586 771 ntBASIC4.12□□□□□ -1.75
NPIPA2E9PIF3 OR52H1-202ENST00000641796 1061 ntBASIC4.12□□□□□ -1.75
NPIPA2E9PIF3 AC092162.3-201ENST00000624511 1624 ntBASIC4.12□□□□□ -1.75
NPIPA2E9PIF3 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
NPIPA2E9PIF3 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC4.12□□□□□ -1.75
NPIPA2E9PIF3 MFSD8-220ENST00000641243 1422 ntBASIC4.12□□□□□ -1.75
NPIPA2E9PIF3 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.12□□□□□ -1.75
NPIPA2E9PIF3 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.12□□□□□ -1.75
NPIPA2E9PIF3 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
NPIPA2E9PIF3 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NPIPA2E9PIF3 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.11□□□□□ -1.75
NPIPA2E9PIF3 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.11□□□□□ -1.75
NPIPA2E9PIF3 PIK3CB-214ENST00000544716 3181 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NPIPA2E9PIF3 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
NPIPA2E9PIF3 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NPIPA2E9PIF3 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.11□□□□□ -1.75
NPIPA2E9PIF3 MIR659-201ENST00000384963 97 ntBASIC4.11□□□□□ -1.75
NPIPA2E9PIF3 AL356967.1-201ENST00000406305 431 ntBASIC4.11□□□□□ -1.75
NPIPA2E9PIF3 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC4.11□□□□□ -1.75
NPIPA2E9PIF3 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NPIPA2E9PIF3 TTTY21B-201ENST00000421353 307 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NPIPA2E9PIF3 AL356387.2-201ENST00000422272 243 ntBASIC4.11□□□□□ -1.75
NPIPA2E9PIF3 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.11□□□□□ -1.75
NPIPA2E9PIF3 AC234779.1-201ENST00000425910 285 ntBASIC4.11□□□□□ -1.75
NPIPA2E9PIF3 RSL24D1P6-201ENST00000426934 401 ntBASIC4.11□□□□□ -1.75
NPIPA2E9PIF3 TTTY21-201ENST00000430228 307 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NPIPA2E9PIF3 AC011998.1-201ENST00000433403 117 ntBASIC4.11□□□□□ -1.75
NPIPA2E9PIF3 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.11□□□□□ -1.75
NPIPA2E9PIF3 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC4.11□□□□□ -1.75
NPIPA2E9PIF3 AL935212.3-201ENST00000450729 284 ntBASIC4.11□□□□□ -1.75
NPIPA2E9PIF3 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.11□□□□□ -1.75
NPIPA2E9PIF3 MTND3P24-201ENST00000506306 329 ntBASIC4.11□□□□□ -1.75
NPIPA2E9PIF3 AC025674.1-201ENST00000507074 324 ntBASIC4.11□□□□□ -1.75
NPIPA2E9PIF3 LINC02483-201ENST00000512043 1143 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
NPIPA2E9PIF3 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.11□□□□□ -1.75
NPIPA2E9PIF3 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.11□□□□□ -1.75
NPIPA2E9PIF3 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC4.11□□□□□ -1.75
NPIPA2E9PIF3 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC4.11□□□□□ -1.75
NPIPA2E9PIF3 OSBPL9P3-201ENST00000534523 595 ntBASIC4.11□□□□□ -1.75
NPIPA2E9PIF3 AL121594.4-201ENST00000556211 1196 ntBASIC4.11□□□□□ -1.75
NPIPA2E9PIF3 AC015912.2-201ENST00000571053 181 ntBASIC4.11□□□□□ -1.75
NPIPA2E9PIF3 AC136624.4-201ENST00000573044 370 ntBASIC4.11□□□□□ -1.75
NPIPA2E9PIF3 AC091178.1-203ENST00000584586 279 ntBASIC4.11□□□□□ -1.75
NPIPA2E9PIF3 HMGB2P1-201ENST00000591146 634 ntBASIC4.11□□□□□ -1.75
NPIPA2E9PIF3 IMMP1LP1-201ENST00000605170 488 ntBASIC4.11□□□□□ -1.75
NPIPA2E9PIF3 AC008966.2-201ENST00000606157 453 ntBASIC4.11□□□□□ -1.75
NPIPA2E9PIF3 AC090948.1-201ENST00000607464 549 ntBASIC4.11□□□□□ -1.75
NPIPA2E9PIF3 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.11□□□□□ -1.75
NPIPA2E9PIF3 U6.48-201ENST00000618523 106 ntBASIC4.11□□□□□ -1.75
NPIPA2E9PIF3 AL445493.3-201ENST00000619568 477 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms