Protein–RNA interactions for Protein: A0A1B0GU29

SMIM28, Small integral membrane protein 28, humanhuman

Predictions only

Length 152 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM28A0A1B0GU29 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC4.29□□□□□ -1.72
SMIM28A0A1B0GU29 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SMIM28A0A1B0GU29 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
SMIM28A0A1B0GU29 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
SMIM28A0A1B0GU29 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.28□□□□□ -1.72
SMIM28A0A1B0GU29 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
SMIM28A0A1B0GU29 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.28□□□□□ -1.72
SMIM28A0A1B0GU29 CYCSP19-201ENST00000411715 316 ntBASIC4.28□□□□□ -1.72
SMIM28A0A1B0GU29 GSTM3P2-201ENST00000412746 530 ntBASIC4.28□□□□□ -1.72
SMIM28A0A1B0GU29 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.28□□□□□ -1.72
SMIM28A0A1B0GU29 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.28□□□□□ -1.72
SMIM28A0A1B0GU29 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC4.28□□□□□ -1.72
SMIM28A0A1B0GU29 RSL24D1P8-201ENST00000434442 492 ntBASIC4.28□□□□□ -1.72
SMIM28A0A1B0GU29 AL589765.3-201ENST00000446084 462 ntBASIC4.28□□□□□ -1.72
SMIM28A0A1B0GU29 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC4.28□□□□□ -1.72
SMIM28A0A1B0GU29 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC4.28□□□□□ -1.72
SMIM28A0A1B0GU29 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.28□□□□□ -1.72
SMIM28A0A1B0GU29 RN7SL542P-201ENST00000467147 294 ntBASIC4.28□□□□□ -1.72
SMIM28A0A1B0GU29 PPM1AP1-201ENST00000502740 1135 ntBASIC4.28□□□□□ -1.72
SMIM28A0A1B0GU29 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.28□□□□□ -1.72
SMIM28A0A1B0GU29 RPS3A-204ENST00000506126 862 ntTSL 5 BASIC4.28□□□□□ -1.72
SMIM28A0A1B0GU29 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SMIM28A0A1B0GU29 FOXD1-AS1-201ENST00000514661 424 ntTSL 3 BASIC4.28□□□□□ -1.72
SMIM28A0A1B0GU29 AC026616.1-201ENST00000523157 525 ntBASIC4.28□□□□□ -1.72
SMIM28A0A1B0GU29 MTCO1P49-201ENST00000523429 802 ntBASIC4.28□□□□□ -1.72
SMIM28A0A1B0GU29 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC4.28□□□□□ -1.72
SMIM28A0A1B0GU29 MED28P5-201ENST00000528254 438 ntBASIC4.28□□□□□ -1.72
SMIM28A0A1B0GU29 RERGL-202ENST00000536890 367 ntTSL 3 BASIC4.28□□□□□ -1.72
SMIM28A0A1B0GU29 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC4.28□□□□□ -1.72
SMIM28A0A1B0GU29 SNHG1-218ENST00000541615 748 ntTSL 5 BASIC4.28□□□□□ -1.72
SMIM28A0A1B0GU29 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.28□□□□□ -1.72
SMIM28A0A1B0GU29 AC010528.1-201ENST00000568714 739 ntTSL 4 BASIC4.28□□□□□ -1.72
SMIM28A0A1B0GU29 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC4.28□□□□□ -1.72
SMIM28A0A1B0GU29 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC4.28□□□□□ -1.72
SMIM28A0A1B0GU29 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.28□□□□□ -1.72
SMIM28A0A1B0GU29 HMGB1P51-201ENST00000605166 638 ntBASIC4.28□□□□□ -1.72
SMIM28A0A1B0GU29 AC100814.1-201ENST00000606963 623 ntBASIC4.28□□□□□ -1.72
SMIM28A0A1B0GU29 AL669942.2-201ENST00000620352 697 ntBASIC4.28□□□□□ -1.72
SMIM28A0A1B0GU29 PACRG-211ENST00000621363 360 ntTSL 5 BASIC4.28□□□□□ -1.72
SMIM28A0A1B0GU29 CCT7-217ENST00000626868 249 ntTSL 5 BASIC4.28□□□□□ -1.72
SMIM28A0A1B0GU29 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC4.28□□□□□ -1.72
SMIM28A0A1B0GU29 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.28□□□□□ -1.72
SMIM28A0A1B0GU29 OTOGL-202ENST00000458043 8083 ntAPPRIS P5 TSL 5 BASIC4.28□□□□□ -1.72
SMIM28A0A1B0GU29 TEX11-201ENST00000344304 2977 ntAPPRIS P3 TSL 5 BASIC4.28□□□□□ -1.72
SMIM28A0A1B0GU29 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
SMIM28A0A1B0GU29 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.27□□□□□ -1.73
SMIM28A0A1B0GU29 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SMIM28A0A1B0GU29 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SMIM28A0A1B0GU29 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SMIM28A0A1B0GU29 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SMIM28A0A1B0GU29 SLC5A12-202ENST00000396005 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SMIM28A0A1B0GU29 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.27□□□□□ -1.73
SMIM28A0A1B0GU29 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC4.27□□□□□ -1.73
SMIM28A0A1B0GU29 AL512504.1-201ENST00000415494 778 ntBASIC4.27□□□□□ -1.73
SMIM28A0A1B0GU29 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.27□□□□□ -1.73
SMIM28A0A1B0GU29 HIGD1AP4-201ENST00000430194 280 ntBASIC4.27□□□□□ -1.73
SMIM28A0A1B0GU29 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC4.27□□□□□ -1.73
SMIM28A0A1B0GU29 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC4.27□□□□□ -1.73
SMIM28A0A1B0GU29 AC239367.2-201ENST00000447309 705 ntBASIC4.27□□□□□ -1.73
SMIM28A0A1B0GU29 AL157884.3-201ENST00000448273 1184 ntBASIC4.27□□□□□ -1.73
SMIM28A0A1B0GU29 MTND2P3-201ENST00000452458 470 ntBASIC4.27□□□□□ -1.73
SMIM28A0A1B0GU29 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC4.27□□□□□ -1.73
SMIM28A0A1B0GU29 STMN1P2-201ENST00000508435 439 ntBASIC4.27□□□□□ -1.73
SMIM28A0A1B0GU29 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SMIM28A0A1B0GU29 IGKV2-38-201ENST00000517443 247 ntBASIC4.27□□□□□ -1.73
SMIM28A0A1B0GU29 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SMIM28A0A1B0GU29 OR10D4P-201ENST00000525892 951 ntBASIC4.27□□□□□ -1.73
SMIM28A0A1B0GU29 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.27□□□□□ -1.73
SMIM28A0A1B0GU29 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC4.27□□□□□ -1.73
SMIM28A0A1B0GU29 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.27□□□□□ -1.73
SMIM28A0A1B0GU29 AC107982.3-201ENST00000584957 985 ntBASIC4.27□□□□□ -1.73
SMIM28A0A1B0GU29 AC015726.1-201ENST00000602353 681 ntBASIC4.27□□□□□ -1.73
SMIM28A0A1B0GU29 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.27□□□□□ -1.73
SMIM28A0A1B0GU29 PDCD6IPP1-202ENST00000622242 1064 ntBASIC4.27□□□□□ -1.73
SMIM28A0A1B0GU29 AP003499.2-201ENST00000624100 483 ntBASIC4.27□□□□□ -1.73
SMIM28A0A1B0GU29 PHEX-201ENST00000379374 6172 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SMIM28A0A1B0GU29 LINC01566-202ENST00000569242 2801 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SMIM28A0A1B0GU29 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.27□□□□□ -1.73
SMIM28A0A1B0GU29 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SMIM28A0A1B0GU29 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
SMIM28A0A1B0GU29 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
SMIM28A0A1B0GU29 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.27□□□□□ -1.73
SMIM28A0A1B0GU29 HSPD1P11-201ENST00000508643 1702 ntBASIC4.26□□□□□ -1.73
SMIM28A0A1B0GU29 AL122126.1-201ENST00000546905 1318 ntBASIC4.26□□□□□ -1.73
SMIM28A0A1B0GU29 ASNSP1-204ENST00000641977 1664 ntBASIC4.26□□□□□ -1.73
SMIM28A0A1B0GU29 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
SMIM28A0A1B0GU29 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SMIM28A0A1B0GU29 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
SMIM28A0A1B0GU29 AP002001.2-201ENST00000529025 1469 ntBASIC4.26□□□□□ -1.73
SMIM28A0A1B0GU29 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
SMIM28A0A1B0GU29 RNU6-1251P-201ENST00000364502 107 ntBASIC4.26□□□□□ -1.73
SMIM28A0A1B0GU29 MIR1251-201ENST00000408552 70 ntBASIC4.26□□□□□ -1.73
SMIM28A0A1B0GU29 SNORA3C-201ENST00000408792 125 ntBASIC4.26□□□□□ -1.73
SMIM28A0A1B0GU29 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.26□□□□□ -1.73
SMIM28A0A1B0GU29 Z97055.1-201ENST00000419730 712 ntBASIC4.26□□□□□ -1.73
SMIM28A0A1B0GU29 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC4.26□□□□□ -1.73
SMIM28A0A1B0GU29 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC4.26□□□□□ -1.73
SMIM28A0A1B0GU29 DYNLL1P7-201ENST00000429273 258 ntBASIC4.26□□□□□ -1.73
SMIM28A0A1B0GU29 MTCO1P54-201ENST00000430139 712 ntBASIC4.26□□□□□ -1.73
SMIM28A0A1B0GU29 AC114878.1-201ENST00000441166 358 ntBASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 135.5 ms