Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC3.67□□□□□ -1.82
KCNIP3Q9Y2W7 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC3.67□□□□□ -1.82
KCNIP3Q9Y2W7 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.67□□□□□ -1.82
KCNIP3Q9Y2W7 OSBPL9P2-201ENST00000526582 1228 ntBASIC3.67□□□□□ -1.82
KCNIP3Q9Y2W7 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.67□□□□□ -1.82
KCNIP3Q9Y2W7 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.67□□□□□ -1.82
KCNIP3Q9Y2W7 MALAT1-203ENST00000544868 480 ntTSL 3 BASIC3.67□□□□□ -1.82
KCNIP3Q9Y2W7 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.67□□□□□ -1.82
KCNIP3Q9Y2W7 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC3.67□□□□□ -1.82
KCNIP3Q9Y2W7 HYKK-203ENST00000563233 734 ntTSL 2 BASIC3.67□□□□□ -1.82
KCNIP3Q9Y2W7 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.67□□□□□ -1.82
KCNIP3Q9Y2W7 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC3.67□□□□□ -1.82
KCNIP3Q9Y2W7 AC067852.4-201ENST00000590314 478 ntBASIC3.67□□□□□ -1.82
KCNIP3Q9Y2W7 AC006116.3-201ENST00000592968 361 ntBASIC3.67□□□□□ -1.82
KCNIP3Q9Y2W7 OR4H6P-202ENST00000603819 340 ntBASIC3.67□□□□□ -1.82
KCNIP3Q9Y2W7 AL450270.1-201ENST00000606160 391 ntBASIC3.67□□□□□ -1.82
KCNIP3Q9Y2W7 AL118556.2-201ENST00000614375 824 ntBASIC3.67□□□□□ -1.82
KCNIP3Q9Y2W7 MIR1264-201ENST00000616374 69 ntBASIC3.67□□□□□ -1.82
KCNIP3Q9Y2W7 MALAT1-217ENST00000620902 352 ntTSL 3 BASIC3.67□□□□□ -1.82
KCNIP3Q9Y2W7 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
KCNIP3Q9Y2W7 AC091905.4-201ENST00000623432 202 ntBASIC3.67□□□□□ -1.82
KCNIP3Q9Y2W7 CDRT1-208ENST00000630868 794 ntBASIC3.67□□□□□ -1.82
KCNIP3Q9Y2W7 AL049767.1-202ENST00000637826 242 ntBASIC3.67□□□□□ -1.82
KCNIP3Q9Y2W7 LINC01739-205ENST00000641890 573 ntBASIC3.67□□□□□ -1.82
KCNIP3Q9Y2W7 AL049737.1-201ENST00000413920 1403 ntBASIC3.67□□□□□ -1.82
KCNIP3Q9Y2W7 HSPA8P1-201ENST00000425843 1833 ntBASIC3.67□□□□□ -1.82
KCNIP3Q9Y2W7 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
KCNIP3Q9Y2W7 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
KCNIP3Q9Y2W7 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC3.66□□□□□ -1.82
KCNIP3Q9Y2W7 CPHL1P-201ENST00000461341 3407 ntBASIC3.66□□□□□ -1.82
KCNIP3Q9Y2W7 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC3.66□□□□□ -1.82
KCNIP3Q9Y2W7 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC3.66□□□□□ -1.82
KCNIP3Q9Y2W7 TRAV14DV4-201ENST00000390440 425 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
KCNIP3Q9Y2W7 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
KCNIP3Q9Y2W7 MIR1911-201ENST00000410783 80 ntBASIC3.66□□□□□ -1.82
KCNIP3Q9Y2W7 AL159169.1-201ENST00000421119 127 ntBASIC3.66□□□□□ -1.82
KCNIP3Q9Y2W7 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC3.66□□□□□ -1.82
KCNIP3Q9Y2W7 OR2B7P-201ENST00000429302 934 ntBASIC3.66□□□□□ -1.82
KCNIP3Q9Y2W7 AC016831.4-201ENST00000438302 307 ntBASIC3.66□□□□□ -1.82
KCNIP3Q9Y2W7 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC3.66□□□□□ -1.82
KCNIP3Q9Y2W7 ARL5AP2-201ENST00000444698 533 ntBASIC3.66□□□□□ -1.82
KCNIP3Q9Y2W7 AURKAPS1-201ENST00000451805 1212 ntBASIC3.66□□□□□ -1.82
KCNIP3Q9Y2W7 SNRPGP5-201ENST00000456003 220 ntBASIC3.66□□□□□ -1.82
KCNIP3Q9Y2W7 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC3.66□□□□□ -1.82
KCNIP3Q9Y2W7 NPM1P17-201ENST00000479221 602 ntBASIC3.66□□□□□ -1.82
KCNIP3Q9Y2W7 PPIAP15-201ENST00000479662 484 ntBASIC3.66□□□□□ -1.82
KCNIP3Q9Y2W7 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC3.66□□□□□ -1.82
KCNIP3Q9Y2W7 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.66□□□□□ -1.82
KCNIP3Q9Y2W7 AL033397.2-201ENST00000508884 547 ntTSL 2 BASIC3.66□□□□□ -1.82
KCNIP3Q9Y2W7 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.66□□□□□ -1.82
KCNIP3Q9Y2W7 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC3.66□□□□□ -1.82
KCNIP3Q9Y2W7 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC3.66□□□□□ -1.82
KCNIP3Q9Y2W7 AC073862.1-201ENST00000537998 409 ntTSL 3 BASIC3.66□□□□□ -1.82
KCNIP3Q9Y2W7 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC3.66□□□□□ -1.82
KCNIP3Q9Y2W7 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.66□□□□□ -1.82
KCNIP3Q9Y2W7 AC025918.2-201ENST00000558683 763 ntBASIC3.66□□□□□ -1.82
KCNIP3Q9Y2W7 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC3.66□□□□□ -1.82
KCNIP3Q9Y2W7 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
KCNIP3Q9Y2W7 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
KCNIP3Q9Y2W7 AC245389.2-201ENST00000616023 576 ntBASIC3.66□□□□□ -1.82
KCNIP3Q9Y2W7 AC243756.2-201ENST00000618406 463 ntBASIC3.66□□□□□ -1.82
KCNIP3Q9Y2W7 AC242843.1-201ENST00000618702 573 ntBASIC3.66□□□□□ -1.82
KCNIP3Q9Y2W7 FRG1DP-201ENST00000635586 771 ntBASIC3.66□□□□□ -1.82
KCNIP3Q9Y2W7 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.66□□□□□ -1.82
KCNIP3Q9Y2W7 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
KCNIP3Q9Y2W7 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
KCNIP3Q9Y2W7 AL137100.1-201ENST00000556703 1620 ntBASIC3.66□□□□□ -1.82
KCNIP3Q9Y2W7 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC3.66□□□□□ -1.82
KCNIP3Q9Y2W7 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.65□□□□□ -1.82
KCNIP3Q9Y2W7 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.82
KCNIP3Q9Y2W7 AC125257.1-201ENST00000560400 2930 ntBASIC3.65□□□□□ -1.82
KCNIP3Q9Y2W7 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
KCNIP3Q9Y2W7 MFSD8-220ENST00000641243 1422 ntBASIC3.65□□□□□ -1.83
KCNIP3Q9Y2W7 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
KCNIP3Q9Y2W7 RPL23P2-201ENST00000320371 421 ntBASIC3.65□□□□□ -1.83
KCNIP3Q9Y2W7 RN7SKP95-201ENST00000362860 303 ntBASIC3.65□□□□□ -1.83
KCNIP3Q9Y2W7 MRM2-202ENST00000407040 582 ntTSL 3 BASIC3.65□□□□□ -1.83
KCNIP3Q9Y2W7 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC3.65□□□□□ -1.83
KCNIP3Q9Y2W7 RPS20P14-201ENST00000412545 360 ntBASIC3.65□□□□□ -1.83
KCNIP3Q9Y2W7 AL161631.1-201ENST00000417933 486 ntBASIC3.65□□□□□ -1.83
KCNIP3Q9Y2W7 AC093162.1-201ENST00000419682 124 ntBASIC3.65□□□□□ -1.83
KCNIP3Q9Y2W7 AC092647.1-201ENST00000420654 287 ntBASIC3.65□□□□□ -1.83
KCNIP3Q9Y2W7 RPL24P2-201ENST00000421023 475 ntBASIC3.65□□□□□ -1.83
KCNIP3Q9Y2W7 AC007559.1-201ENST00000428736 355 ntBASIC3.65□□□□□ -1.83
KCNIP3Q9Y2W7 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC3.65□□□□□ -1.83
KCNIP3Q9Y2W7 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC3.65□□□□□ -1.83
KCNIP3Q9Y2W7 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC3.65□□□□□ -1.83
KCNIP3Q9Y2W7 AL356289.2-201ENST00000455238 292 ntTSL 5 BASIC3.65□□□□□ -1.83
KCNIP3Q9Y2W7 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
KCNIP3Q9Y2W7 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.65□□□□□ -1.83
KCNIP3Q9Y2W7 RCHY1-206ENST00000507014 650 ntTSL 3 BASIC3.65□□□□□ -1.83
KCNIP3Q9Y2W7 AC007016.1-201ENST00000512110 244 ntBASIC3.65□□□□□ -1.83
KCNIP3Q9Y2W7 KCTD9P2-201ENST00000512203 1013 ntBASIC3.65□□□□□ -1.83
KCNIP3Q9Y2W7 OR5AK3P-201ENST00000527486 1297 ntBASIC3.65□□□□□ -1.83
KCNIP3Q9Y2W7 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC3.65□□□□□ -1.83
KCNIP3Q9Y2W7 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC3.65□□□□□ -1.83
KCNIP3Q9Y2W7 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC3.65□□□□□ -1.83
KCNIP3Q9Y2W7 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC3.65□□□□□ -1.83
KCNIP3Q9Y2W7 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
KCNIP3Q9Y2W7 AC087763.1-201ENST00000603391 286 ntBASIC3.65□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms