Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 RNA5SP219-201ENST00000390940 113 ntBASIC7.3□□□□□ -1.24
VPS9D1Q9Y2B5 AL356421.1-201ENST00000403255 413 ntBASIC7.3□□□□□ -1.24
VPS9D1Q9Y2B5 RNU2-25P-201ENST00000411041 191 ntBASIC7.3□□□□□ -1.24
VPS9D1Q9Y2B5 RN7SKP108-201ENST00000411367 328 ntBASIC7.3□□□□□ -1.24
VPS9D1Q9Y2B5 PPIAP30-201ENST00000415473 519 ntBASIC7.3□□□□□ -1.24
VPS9D1Q9Y2B5 AL593856.1-201ENST00000419949 805 ntBASIC7.3□□□□□ -1.24
VPS9D1Q9Y2B5 AL360081.1-201ENST00000428299 555 ntBASIC7.3□□□□□ -1.24
VPS9D1Q9Y2B5 AL021707.2-201ENST00000431924 786 ntTSL 3 BASIC7.3□□□□□ -1.24
VPS9D1Q9Y2B5 HBBP1-201ENST00000433329 439 ntBASIC7.3□□□□□ -1.24
VPS9D1Q9Y2B5 AL133215.1-201ENST00000447344 342 ntTSL 3 BASIC7.3□□□□□ -1.24
VPS9D1Q9Y2B5 AC002486.2-201ENST00000447806 590 ntBASIC7.3□□□□□ -1.24
VPS9D1Q9Y2B5 AL035090.1-201ENST00000454835 332 ntBASIC7.3□□□□□ -1.24
VPS9D1Q9Y2B5 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC7.3□□□□□ -1.24
VPS9D1Q9Y2B5 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC7.3□□□□□ -1.24
VPS9D1Q9Y2B5 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC7.3□□□□□ -1.24
VPS9D1Q9Y2B5 AC026979.1-201ENST00000492525 396 ntBASIC7.3□□□□□ -1.24
VPS9D1Q9Y2B5 PGAM1P13-201ENST00000507497 754 ntBASIC7.3□□□□□ -1.24
VPS9D1Q9Y2B5 AC116049.2-201ENST00000508572 754 ntTSL 4 BASIC7.3□□□□□ -1.24
VPS9D1Q9Y2B5 IGLVI-42-201ENST00000522485 381 ntBASIC7.3□□□□□ -1.24
VPS9D1Q9Y2B5 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC7.3□□□□□ -1.24
VPS9D1Q9Y2B5 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC7.3□□□□□ -1.24
VPS9D1Q9Y2B5 AC009955.2-201ENST00000597288 542 ntBASIC7.3□□□□□ -1.24
VPS9D1Q9Y2B5 AC025857.2-201ENST00000602711 238 ntBASIC7.3□□□□□ -1.24
VPS9D1Q9Y2B5 AP001486.3-201ENST00000615334 372 ntBASIC7.3□□□□□ -1.24
VPS9D1Q9Y2B5 AC002115.2-201ENST00000640449 603 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
VPS9D1Q9Y2B5 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC7.3□□□□□ -1.24
VPS9D1Q9Y2B5 STK33-201ENST00000315204 2707 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
VPS9D1Q9Y2B5 LAMB4-201ENST00000205386 5857 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
VPS9D1Q9Y2B5 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
VPS9D1Q9Y2B5 RAPGEF6-208ENST00000509018 8357 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
VPS9D1Q9Y2B5 PIK3CB-208ENST00000477593 4658 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
VPS9D1Q9Y2B5 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
VPS9D1Q9Y2B5 WDR44-202ENST00000371822 3877 ntTSL 2 BASIC7.3□□□□□ -1.24
VPS9D1Q9Y2B5 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
VPS9D1Q9Y2B5 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC7.3□□□□□ -1.24
VPS9D1Q9Y2B5 JAML-206ENST00000526620 1383 ntAPPRIS ALT2 TSL 2 BASIC7.3□□□□□ -1.24
VPS9D1Q9Y2B5 AC020743.2-201ENST00000639870 1370 ntTSL 5 BASIC7.3□□□□□ -1.24
VPS9D1Q9Y2B5 WNK3-201ENST00000354646 11341 ntAPPRIS P3 TSL 1 (best) BASIC7.3□□□□□ -1.24
VPS9D1Q9Y2B5 CLSPN-201ENST00000251195 4769 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
VPS9D1Q9Y2B5 AC002525.1-201ENST00000624392 1622 ntBASIC7.3□□□□□ -1.24
VPS9D1Q9Y2B5 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC7.3□□□□□ -1.24
VPS9D1Q9Y2B5 NPIPB11-201ENST00000524087 3653 ntAPPRIS P1 TSL 5 BASIC7.3□□□□□ -1.24
VPS9D1Q9Y2B5 MRE11P1-201ENST00000464884 2127 ntBASIC7.3□□□□□ -1.24
VPS9D1Q9Y2B5 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC7.3□□□□□ -1.24
VPS9D1Q9Y2B5 ZNF300-204ENST00000427179 4155 ntTSL 2 BASIC7.3□□□□□ -1.24
VPS9D1Q9Y2B5 ERBIN-205ENST00000416865 2351 ntTSL 2 BASIC7.3□□□□□ -1.24
VPS9D1Q9Y2B5 SRFBP1-201ENST00000339397 2855 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
VPS9D1Q9Y2B5 ZNF770-201ENST00000356321 5439 ntAPPRIS P1 TSL 1 (best) BASIC7.3□□□□□ -1.24
VPS9D1Q9Y2B5 AC096564.2-201ENST00000512428 3147 ntTSL 5 BASIC7.3□□□□□ -1.24
VPS9D1Q9Y2B5 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC7.29□□□□□ -1.24
VPS9D1Q9Y2B5 PFKFB1-203ENST00000545676 1591 ntTSL 2 BASIC7.29□□□□□ -1.24
VPS9D1Q9Y2B5 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC7.29□□□□□ -1.24
VPS9D1Q9Y2B5 NME8-201ENST00000199447 2312 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
VPS9D1Q9Y2B5 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC7.29□□□□□ -1.24
VPS9D1Q9Y2B5 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
VPS9D1Q9Y2B5 FGF13-201ENST00000305414 1939 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
VPS9D1Q9Y2B5 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
VPS9D1Q9Y2B5 ZNF484-204ENST00000395506 4031 ntTSL 3 BASIC7.29□□□□□ -1.24
VPS9D1Q9Y2B5 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
VPS9D1Q9Y2B5 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC7.29□□□□□ -1.24
VPS9D1Q9Y2B5 PUS10-201ENST00000316752 2278 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
VPS9D1Q9Y2B5 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC7.29□□□□□ -1.24
VPS9D1Q9Y2B5 FER1L6-201ENST00000522917 6051 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
VPS9D1Q9Y2B5 JAKMIP2-205ENST00000507386 5915 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
VPS9D1Q9Y2B5 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC7.29□□□□□ -1.24
VPS9D1Q9Y2B5 C11orf54-207ENST00000528288 4094 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
VPS9D1Q9Y2B5 GNG13-201ENST00000248150 984 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
VPS9D1Q9Y2B5 Y_RNA.54-201ENST00000362766 105 ntBASIC7.29□□□□□ -1.24
VPS9D1Q9Y2B5 RNU4-50P-201ENST00000364361 141 ntBASIC7.29□□□□□ -1.24
VPS9D1Q9Y2B5 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC7.29□□□□□ -1.24
VPS9D1Q9Y2B5 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC7.29□□□□□ -1.24
VPS9D1Q9Y2B5 AL359643.1-201ENST00000404109 423 ntBASIC7.29□□□□□ -1.24
VPS9D1Q9Y2B5 AL603910.2-201ENST00000407268 136 ntBASIC7.29□□□□□ -1.24
VPS9D1Q9Y2B5 AC009413.1-201ENST00000414823 399 ntBASIC7.29□□□□□ -1.24
VPS9D1Q9Y2B5 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC7.29□□□□□ -1.24
VPS9D1Q9Y2B5 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC7.29□□□□□ -1.24
VPS9D1Q9Y2B5 AC106869.1-202ENST00000441997 604 ntTSL 4 BASIC7.29□□□□□ -1.24
VPS9D1Q9Y2B5 CDC42P2-201ENST00000448566 569 ntBASIC7.29□□□□□ -1.24
VPS9D1Q9Y2B5 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC7.29□□□□□ -1.24
VPS9D1Q9Y2B5 TCEAL4P1-201ENST00000453620 588 ntBASIC7.29□□□□□ -1.24
VPS9D1Q9Y2B5 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC7.29□□□□□ -1.24
VPS9D1Q9Y2B5 RN7SL213P-201ENST00000463482 317 ntBASIC7.29□□□□□ -1.24
VPS9D1Q9Y2B5 AC104472.2-201ENST00000469035 601 ntBASIC7.29□□□□□ -1.24
VPS9D1Q9Y2B5 RPL7AP56-201ENST00000476420 791 ntBASIC7.29□□□□□ -1.24
VPS9D1Q9Y2B5 AC105384.2-201ENST00000508433 640 ntBASIC7.29□□□□□ -1.24
VPS9D1Q9Y2B5 EIF3KP3-201ENST00000514461 639 ntBASIC7.29□□□□□ -1.24
VPS9D1Q9Y2B5 SNORA31.6-201ENST00000516241 130 ntBASIC7.29□□□□□ -1.24
VPS9D1Q9Y2B5 RNU6-313P-201ENST00000516317 112 ntBASIC7.29□□□□□ -1.24
VPS9D1Q9Y2B5 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC7.29□□□□□ -1.24
VPS9D1Q9Y2B5 AC025524.2-202ENST00000523042 535 ntTSL 4 BASIC7.29□□□□□ -1.24
VPS9D1Q9Y2B5 AF279873.1-201ENST00000523393 313 ntBASIC7.29□□□□□ -1.24
VPS9D1Q9Y2B5 AP000442.2-201ENST00000531108 440 ntTSL 3 BASIC7.29□□□□□ -1.24
VPS9D1Q9Y2B5 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC7.29□□□□□ -1.24
VPS9D1Q9Y2B5 AC091516.1-201ENST00000549191 703 ntBASIC7.29□□□□□ -1.24
VPS9D1Q9Y2B5 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC7.29□□□□□ -1.24
VPS9D1Q9Y2B5 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC7.29□□□□□ -1.24
VPS9D1Q9Y2B5 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC7.29□□□□□ -1.24
VPS9D1Q9Y2B5 RN7SL311P-201ENST00000579858 306 ntBASIC7.29□□□□□ -1.24
VPS9D1Q9Y2B5 AC006116.9-203ENST00000591036 566 ntTSL 4 BASIC7.29□□□□□ -1.24
VPS9D1Q9Y2B5 AC015802.4-202ENST00000591967 474 ntTSL 3 BASIC7.29□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms