Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 LMCD1-AS1-202ENST00000439407 576 ntTSL 4 BASIC8.77□□□□□ -1.01
TRIM35Q9UPQ4 AC114814.1-201ENST00000444926 691 ntTSL 3 BASIC8.77□□□□□ -1.01
TRIM35Q9UPQ4 AL162427.1-201ENST00000450399 439 ntTSL 5 BASIC8.77□□□□□ -1.01
TRIM35Q9UPQ4 AP1S2P1-201ENST00000457344 379 ntBASIC8.77□□□□□ -1.01
TRIM35Q9UPQ4 AP003385.3-201ENST00000472498 287 ntBASIC8.77□□□□□ -1.01
TRIM35Q9UPQ4 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC8.77□□□□□ -1.01
TRIM35Q9UPQ4 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC8.77□□□□□ -1.01
TRIM35Q9UPQ4 ASB8-207ENST00000536953 923 ntTSL 2 BASIC8.77□□□□□ -1.01
TRIM35Q9UPQ4 AC068446.3-201ENST00000555285 382 ntBASIC8.77□□□□□ -1.01
TRIM35Q9UPQ4 AL049839.1-201ENST00000556151 657 ntBASIC8.77□□□□□ -1.01
TRIM35Q9UPQ4 AL118558.2-201ENST00000556294 238 ntBASIC8.77□□□□□ -1.01
TRIM35Q9UPQ4 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC8.77□□□□□ -1.01
TRIM35Q9UPQ4 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC8.77□□□□□ -1.01
TRIM35Q9UPQ4 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC8.77□□□□□ -1.01
TRIM35Q9UPQ4 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC8.77□□□□□ -1.01
TRIM35Q9UPQ4 MIR4424-201ENST00000585257 86 ntBASIC8.77□□□□□ -1.01
TRIM35Q9UPQ4 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC8.77□□□□□ -1.01
TRIM35Q9UPQ4 AC040963.1-201ENST00000591900 564 ntTSL 4 BASIC8.77□□□□□ -1.01
TRIM35Q9UPQ4 AC073488.9-201ENST00000631601 754 ntBASIC8.77□□□□□ -1.01
TRIM35Q9UPQ4 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC8.77□□□□□ -1.01
TRIM35Q9UPQ4 MAPK10-323ENST00000641493 3207 ntBASIC8.77□□□□□ -1.01
TRIM35Q9UPQ4 AC121333.1-201ENST00000567488 2709 ntBASIC8.77□□□□□ -1.01
TRIM35Q9UPQ4 IL1RAP-201ENST00000072516 4697 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
TRIM35Q9UPQ4 NRXN3-207ENST00000554719 4156 ntTSL 1 (best) BASIC8.77□□□□□ -1.01
TRIM35Q9UPQ4 GLMN-201ENST00000370360 1995 ntAPPRIS P1 TSL 1 (best) BASIC8.77□□□□□ -1.01
TRIM35Q9UPQ4 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC8.77□□□□□ -1.01
TRIM35Q9UPQ4 AC110597.1-201ENST00000562669 3176 ntBASIC8.77□□□□□ -1.01
TRIM35Q9UPQ4 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC8.77□□□□□ -1.01
TRIM35Q9UPQ4 FAM221B-203ENST00000423537 2931 ntAPPRIS P2 TSL 1 (best) BASIC8.77□□□□□ -1.01
TRIM35Q9UPQ4 AC099062.1-202ENST00000640362 3864 ntTSL 5 BASIC8.77□□□□□ -1.01
TRIM35Q9UPQ4 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
TRIM35Q9UPQ4 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC8.76□□□□□ -1.01
TRIM35Q9UPQ4 PTPN22-203ENST00000460620 1794 ntTSL 1 (best) BASIC8.76□□□□□ -1.01
TRIM35Q9UPQ4 CACNB4-223ENST00000636380 1756 ntTSL 5 BASIC8.76□□□□□ -1.01
TRIM35Q9UPQ4 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
TRIM35Q9UPQ4 AC007012.2-201ENST00000623206 1676 ntBASIC8.76□□□□□ -1.01
TRIM35Q9UPQ4 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC8.76□□□□□ -1.01
TRIM35Q9UPQ4 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.01
TRIM35Q9UPQ4 RNA5SP65-201ENST00000363166 119 ntBASIC8.76□□□□□ -1.01
TRIM35Q9UPQ4 Y_RNA.167-201ENST00000363735 109 ntBASIC8.76□□□□□ -1.01
TRIM35Q9UPQ4 RNU6-704P-201ENST00000364162 103 ntBASIC8.76□□□□□ -1.01
TRIM35Q9UPQ4 Y_RNA.276-201ENST00000364732 109 ntBASIC8.76□□□□□ -1.01
TRIM35Q9UPQ4 RN7SKP205-201ENST00000410999 307 ntBASIC8.76□□□□□ -1.01
TRIM35Q9UPQ4 RNU2-14P-201ENST00000411053 191 ntBASIC8.76□□□□□ -1.01
TRIM35Q9UPQ4 GSTM3P2-201ENST00000412746 530 ntBASIC8.76□□□□□ -1.01
TRIM35Q9UPQ4 RPSAP35-201ENST00000413753 818 ntBASIC8.76□□□□□ -1.01
TRIM35Q9UPQ4 OR4K11P-201ENST00000431829 904 ntBASIC8.76□□□□□ -1.01
TRIM35Q9UPQ4 SUMO2P8-201ENST00000434672 286 ntBASIC8.76□□□□□ -1.01
TRIM35Q9UPQ4 AL138752.1-201ENST00000452964 351 ntBASIC8.76□□□□□ -1.01
TRIM35Q9UPQ4 AKR1D1P1-201ENST00000457236 936 ntBASIC8.76□□□□□ -1.01
TRIM35Q9UPQ4 RPL12P31-201ENST00000478433 450 ntBASIC8.76□□□□□ -1.01
TRIM35Q9UPQ4 RPL5P22-201ENST00000480199 884 ntBASIC8.76□□□□□ -1.01
TRIM35Q9UPQ4 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC8.76□□□□□ -1.01
TRIM35Q9UPQ4 AC026785.3-201ENST00000511182 285 ntTSL 2 BASIC8.76□□□□□ -1.01
TRIM35Q9UPQ4 SNORD27.1-201ENST00000516319 72 ntBASIC8.76□□□□□ -1.01
TRIM35Q9UPQ4 Vault.2-201ENST00000516519 98 ntBASIC8.76□□□□□ -1.01
TRIM35Q9UPQ4 RNU5B-3P-201ENST00000516601 115 ntBASIC8.76□□□□□ -1.01
TRIM35Q9UPQ4 RNU6-1016P-201ENST00000516689 94 ntBASIC8.76□□□□□ -1.01
TRIM35Q9UPQ4 AC136424.2-201ENST00000522582 563 ntTSL 4 BASIC8.76□□□□□ -1.01
TRIM35Q9UPQ4 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC8.76□□□□□ -1.01
TRIM35Q9UPQ4 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC8.76□□□□□ -1.01
TRIM35Q9UPQ4 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC8.76□□□□□ -1.01
TRIM35Q9UPQ4 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC8.76□□□□□ -1.01
TRIM35Q9UPQ4 AC106785.4-201ENST00000569492 412 ntBASIC8.76□□□□□ -1.01
TRIM35Q9UPQ4 OR4K8P-201ENST00000578842 1048 ntBASIC8.76□□□□□ -1.01
TRIM35Q9UPQ4 AC024267.2-201ENST00000582737 417 ntBASIC8.76□□□□□ -1.01
TRIM35Q9UPQ4 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC8.76□□□□□ -1.01
TRIM35Q9UPQ4 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC8.76□□□□□ -1.01
TRIM35Q9UPQ4 AC011921.2-201ENST00000589465 152 ntBASIC8.76□□□□□ -1.01
TRIM35Q9UPQ4 AC023043.2-201ENST00000589678 1026 ntBASIC8.76□□□□□ -1.01
TRIM35Q9UPQ4 SNORD96A-201ENST00000606577 79 ntBASIC8.76□□□□□ -1.01
TRIM35Q9UPQ4 SNORD58B-201ENST00000607313 66 ntBASIC8.76□□□□□ -1.01
TRIM35Q9UPQ4 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC8.76□□□□□ -1.01
TRIM35Q9UPQ4 SOCS5P3-201ENST00000425115 1576 ntBASIC8.76□□□□□ -1.01
TRIM35Q9UPQ4 AL627309.5-201ENST00000484859 4860 ntTSL 5 BASIC8.76□□□□□ -1.01
TRIM35Q9UPQ4 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC8.76□□□□□ -1.01
TRIM35Q9UPQ4 OR2F1-203ENST00000641412 4829 ntAPPRIS P1 BASIC8.76□□□□□ -1.01
TRIM35Q9UPQ4 MKI67P1-201ENST00000604297 1460 ntBASIC8.76□□□□□ -1.01
TRIM35Q9UPQ4 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC8.76□□□□□ -1.01
TRIM35Q9UPQ4 ITPR1-201ENST00000302640 10197 ntAPPRIS ALT1 TSL 5 BASIC8.76□□□□□ -1.01
TRIM35Q9UPQ4 SELP-203ENST00000367788 2427 ntAPPRIS ALT2 TSL 5 BASIC8.75□□□□□ -1.01
TRIM35Q9UPQ4 SRPX2-201ENST00000373004 6679 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
TRIM35Q9UPQ4 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC8.75□□□□□ -1.01
TRIM35Q9UPQ4 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC8.75□□□□□ -1.01
TRIM35Q9UPQ4 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC8.75□□□□□ -1.01
TRIM35Q9UPQ4 LIMD1-201ENST00000273317 11331 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
TRIM35Q9UPQ4 NAT1-206ENST00000518029 2162 ntAPPRIS P1 TSL 1 (best) BASIC8.75□□□□□ -1.01
TRIM35Q9UPQ4 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC8.75□□□□□ -1.01
TRIM35Q9UPQ4 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC8.75□□□□□ -1.01
TRIM35Q9UPQ4 NCOA4P3-201ENST00000513203 1877 ntBASIC8.75□□□□□ -1.01
TRIM35Q9UPQ4 AC105114.1-201ENST00000624795 1862 ntBASIC8.75□□□□□ -1.01
TRIM35Q9UPQ4 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
TRIM35Q9UPQ4 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC8.75□□□□□ -1.01
TRIM35Q9UPQ4 RNU6-190P-201ENST00000384154 102 ntBASIC8.75□□□□□ -1.01
TRIM35Q9UPQ4 SLC19A3-202ENST00000409287 644 ntTSL 3 BASIC8.75□□□□□ -1.01
TRIM35Q9UPQ4 AL663061.1-201ENST00000416625 580 ntBASIC8.75□□□□□ -1.01
TRIM35Q9UPQ4 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC8.75□□□□□ -1.01
TRIM35Q9UPQ4 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC8.75□□□□□ -1.01
TRIM35Q9UPQ4 AL133268.4-201ENST00000424868 472 ntTSL 3 BASIC8.75□□□□□ -1.01
TRIM35Q9UPQ4 GAPDHP33-201ENST00000443168 1013 ntBASIC8.75□□□□□ -1.01
Retrieved 100 of 98,524 protein–RNA pairs in 128 ms