Protein–RNA interactions for Protein: Q9P232

CNTN3, Contactin-3, humanhuman

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTN3Q9P232 AL354890.1-201ENST00000413730 346 ntBASIC6.53□□□□□ -1.36
CNTN3Q9P232 BX284632.2-201ENST00000421091 399 ntBASIC6.53□□□□□ -1.36
CNTN3Q9P232 AC007562.1-201ENST00000421819 517 ntBASIC6.53□□□□□ -1.36
CNTN3Q9P232 NPM1P34-201ENST00000428821 893 ntBASIC6.53□□□□□ -1.36
CNTN3Q9P232 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC6.53□□□□□ -1.36
CNTN3Q9P232 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC6.53□□□□□ -1.36
CNTN3Q9P232 AC023274.2-201ENST00000445264 521 ntBASIC6.53□□□□□ -1.36
CNTN3Q9P232 AL359955.2-201ENST00000445380 353 ntBASIC6.53□□□□□ -1.36
CNTN3Q9P232 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CNTN3Q9P232 MYCBP2-AS1-203ENST00000450627 349 ntTSL 3 BASIC6.53□□□□□ -1.36
CNTN3Q9P232 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC6.53□□□□□ -1.36
CNTN3Q9P232 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC6.53□□□□□ -1.36
CNTN3Q9P232 TRGVB-201ENST00000453257 471 ntBASIC6.53□□□□□ -1.36
CNTN3Q9P232 Z82190.1-201ENST00000454534 490 ntBASIC6.53□□□□□ -1.36
CNTN3Q9P232 C1DP4-201ENST00000455429 424 ntBASIC6.53□□□□□ -1.36
CNTN3Q9P232 RPL7P6-201ENST00000480903 738 ntBASIC6.53□□□□□ -1.36
CNTN3Q9P232 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC6.53□□□□□ -1.36
CNTN3Q9P232 AC006499.2-201ENST00000513470 337 ntBASIC6.53□□□□□ -1.36
CNTN3Q9P232 RNU6-150P-201ENST00000516237 95 ntBASIC6.53□□□□□ -1.36
CNTN3Q9P232 HSPA8P13-201ENST00000523715 472 ntBASIC6.53□□□□□ -1.36
CNTN3Q9P232 EIF4A2P5-201ENST00000529914 499 ntBASIC6.53□□□□□ -1.36
CNTN3Q9P232 LINC01486-201ENST00000538041 716 ntTSL 2 BASIC6.53□□□□□ -1.36
CNTN3Q9P232 AL121594.2-201ENST00000541658 472 ntBASIC6.53□□□□□ -1.36
CNTN3Q9P232 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC6.53□□□□□ -1.36
CNTN3Q9P232 AL845331.3-202ENST00000562856 261 ntBASIC6.53□□□□□ -1.36
CNTN3Q9P232 RPS3AP23-202ENST00000574601 686 ntBASIC6.53□□□□□ -1.36
CNTN3Q9P232 MIR4675-201ENST00000577898 77 ntBASIC6.53□□□□□ -1.36
CNTN3Q9P232 MIR544B-201ENST00000582372 78 ntBASIC6.53□□□□□ -1.36
CNTN3Q9P232 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.53□□□□□ -1.36
CNTN3Q9P232 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC6.53□□□□□ -1.36
CNTN3Q9P232 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC6.53□□□□□ -1.36
CNTN3Q9P232 AC022916.3-201ENST00000592961 742 ntBASIC6.53□□□□□ -1.36
CNTN3Q9P232 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC6.53□□□□□ -1.36
CNTN3Q9P232 AL451049.1-201ENST00000608672 497 ntBASIC6.53□□□□□ -1.36
CNTN3Q9P232 AL136295.6-201ENST00000610486 658 ntBASIC6.53□□□□□ -1.36
CNTN3Q9P232 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC6.53□□□□□ -1.36
CNTN3Q9P232 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC6.53□□□□□ -1.36
CNTN3Q9P232 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
CNTN3Q9P232 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC6.53□□□□□ -1.36
CNTN3Q9P232 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.53□□□□□ -1.36
CNTN3Q9P232 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CNTN3Q9P232 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
CNTN3Q9P232 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CNTN3Q9P232 SLFN12-201ENST00000304905 2383 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CNTN3Q9P232 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
CNTN3Q9P232 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC6.53□□□□□ -1.36
CNTN3Q9P232 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
CNTN3Q9P232 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC6.53□□□□□ -1.36
CNTN3Q9P232 AL158064.2-205ENST00000640346 4082 ntTSL 5 BASIC6.52□□□□□ -1.37
CNTN3Q9P232 AL355488.2-201ENST00000609909 2850 ntBASIC6.52□□□□□ -1.37
CNTN3Q9P232 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC6.52□□□□□ -1.37
CNTN3Q9P232 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CNTN3Q9P232 AC090017.1-201ENST00000548612 1779 ntBASIC6.52□□□□□ -1.37
CNTN3Q9P232 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.52□□□□□ -1.37
CNTN3Q9P232 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CNTN3Q9P232 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.52□□□□□ -1.37
CNTN3Q9P232 TEX9-203ENST00000558083 4440 ntTSL 2 BASIC6.52□□□□□ -1.37
CNTN3Q9P232 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC6.52□□□□□ -1.37
CNTN3Q9P232 OR11H4-201ENST00000315409 1082 ntBASIC6.52□□□□□ -1.37
CNTN3Q9P232 Y_RNA.72-201ENST00000362894 103 ntBASIC6.52□□□□□ -1.37
CNTN3Q9P232 RNU6-251P-201ENST00000363235 104 ntBASIC6.52□□□□□ -1.37
CNTN3Q9P232 U8.3-201ENST00000363321 132 ntBASIC6.52□□□□□ -1.37
CNTN3Q9P232 Y_RNA.162-201ENST00000363683 102 ntBASIC6.52□□□□□ -1.37
CNTN3Q9P232 RNU6-1151P-201ENST00000384684 107 ntBASIC6.52□□□□□ -1.37
CNTN3Q9P232 AL590004.1-201ENST00000405321 300 ntBASIC6.52□□□□□ -1.37
CNTN3Q9P232 AL603766.1-201ENST00000407763 664 ntBASIC6.52□□□□□ -1.37
CNTN3Q9P232 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CNTN3Q9P232 SPA17P1-201ENST00000416656 452 ntBASIC6.52□□□□□ -1.37
CNTN3Q9P232 RBMY2KP-201ENST00000418221 992 ntBASIC6.52□□□□□ -1.37
CNTN3Q9P232 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC6.52□□□□□ -1.37
CNTN3Q9P232 AC073323.1-201ENST00000419832 451 ntTSL 2 BASIC6.52□□□□□ -1.37
CNTN3Q9P232 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC6.52□□□□□ -1.37
CNTN3Q9P232 COX6CP17-201ENST00000421389 185 ntBASIC6.52□□□□□ -1.37
CNTN3Q9P232 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC6.52□□□□□ -1.37
CNTN3Q9P232 USP9YP36-201ENST00000424581 829 ntBASIC6.52□□□□□ -1.37
CNTN3Q9P232 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
CNTN3Q9P232 AL451042.1-201ENST00000426353 544 ntTSL 3 BASIC6.52□□□□□ -1.37
CNTN3Q9P232 RPS29P14-201ENST00000431518 171 ntBASIC6.52□□□□□ -1.37
CNTN3Q9P232 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC6.52□□□□□ -1.37
CNTN3Q9P232 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC6.52□□□□□ -1.37
CNTN3Q9P232 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC6.52□□□□□ -1.37
CNTN3Q9P232 AC079922.1-201ENST00000443291 359 ntBASIC6.52□□□□□ -1.37
CNTN3Q9P232 MTCO1P27-201ENST00000448269 226 ntBASIC6.52□□□□□ -1.37
CNTN3Q9P232 AC079448.1-201ENST00000449377 373 ntBASIC6.52□□□□□ -1.37
CNTN3Q9P232 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC6.52□□□□□ -1.37
CNTN3Q9P232 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC6.52□□□□□ -1.37
CNTN3Q9P232 OR6K1P-201ENST00000456766 971 ntBASIC6.52□□□□□ -1.37
CNTN3Q9P232 AC017015.1-201ENST00000477387 286 ntBASIC6.52□□□□□ -1.37
CNTN3Q9P232 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC6.52□□□□□ -1.37
CNTN3Q9P232 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC6.52□□□□□ -1.37
CNTN3Q9P232 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC6.52□□□□□ -1.37
CNTN3Q9P232 HMGN1P13-201ENST00000505795 138 ntBASIC6.52□□□□□ -1.37
CNTN3Q9P232 FGF7P4-201ENST00000509595 295 ntBASIC6.52□□□□□ -1.37
CNTN3Q9P232 RNU6-1281P-201ENST00000516223 105 ntBASIC6.52□□□□□ -1.37
CNTN3Q9P232 snoU109.5-201ENST00000516231 132 ntBASIC6.52□□□□□ -1.37
CNTN3Q9P232 RNA5SP271-201ENST00000516700 88 ntBASIC6.52□□□□□ -1.37
CNTN3Q9P232 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC6.52□□□□□ -1.37
CNTN3Q9P232 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC6.52□□□□□ -1.37
CNTN3Q9P232 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6.52□□□□□ -1.37
CNTN3Q9P232 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 101.9 ms