Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 AC090525.3-201ENST00000605601 189 ntBASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 AC087045.1-201ENST00000605856 382 ntBASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 AL133481.2-203ENST00000607558 139 ntBASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 AC064836.2-201ENST00000609491 462 ntBASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 AC131902.3-201ENST00000611767 581 ntBASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 RPL36A-210ENST00000614077 881 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 AL139099.4-201ENST00000614802 114 ntBASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 AC008250.2-201ENST00000615261 205 ntBASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 MIR6861-201ENST00000618657 64 ntBASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 AC092650.2-201ENST00000619984 902 ntBASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 AL031665.2-201ENST00000620712 209 ntTSL 3 BASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 AC022400.9-201ENST00000623633 273 ntBASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 AC107982.1-201ENST00000507171 1300 ntBASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 OR5BR1P-201ENST00000524992 1330 ntBASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 AC131971.1-201ENST00000332881 1482 ntBASIC5.2□□□□□ -1.58
SEC61A2Q9H9S3 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
SEC61A2Q9H9S3 KCNRG-202ENST00000360473 1623 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SEC61A2Q9H9S3 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
SEC61A2Q9H9S3 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SEC61A2Q9H9S3 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC5.19□□□□□ -1.58
SEC61A2Q9H9S3 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SEC61A2Q9H9S3 ATP1B4-201ENST00000218008 3868 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SEC61A2Q9H9S3 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.19□□□□□ -1.58
SEC61A2Q9H9S3 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SEC61A2Q9H9S3 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SEC61A2Q9H9S3 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SEC61A2Q9H9S3 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
SEC61A2Q9H9S3 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SEC61A2Q9H9S3 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SEC61A2Q9H9S3 GABRG3-201ENST00000333743 1235 ntTSL 5 BASIC5.19□□□□□ -1.58
SEC61A2Q9H9S3 TAF13-201ENST00000338366 813 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SEC61A2Q9H9S3 Y_RNA.296-201ENST00000364930 108 ntBASIC5.19□□□□□ -1.58
SEC61A2Q9H9S3 RN7SKP81-201ENST00000365603 331 ntBASIC5.19□□□□□ -1.58
SEC61A2Q9H9S3 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
SEC61A2Q9H9S3 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SEC61A2Q9H9S3 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SEC61A2Q9H9S3 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SEC61A2Q9H9S3 RNU6-723P-201ENST00000383973 107 ntBASIC5.19□□□□□ -1.58
SEC61A2Q9H9S3 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
SEC61A2Q9H9S3 CALM2P3-201ENST00000400429 449 ntBASIC5.19□□□□□ -1.58
SEC61A2Q9H9S3 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
SEC61A2Q9H9S3 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC5.19□□□□□ -1.58
SEC61A2Q9H9S3 RPS3P2-201ENST00000421346 701 ntBASIC5.19□□□□□ -1.58
SEC61A2Q9H9S3 AL356583.2-201ENST00000426536 280 ntBASIC5.19□□□□□ -1.58
SEC61A2Q9H9S3 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC5.19□□□□□ -1.58
SEC61A2Q9H9S3 AL136231.1-201ENST00000429407 730 ntBASIC5.19□□□□□ -1.58
SEC61A2Q9H9S3 AC073464.1-201ENST00000429823 534 ntBASIC5.19□□□□□ -1.58
SEC61A2Q9H9S3 VDAC1P6-201ENST00000430062 855 ntBASIC5.19□□□□□ -1.58
SEC61A2Q9H9S3 RPL21P110-201ENST00000433345 446 ntBASIC5.19□□□□□ -1.58
SEC61A2Q9H9S3 KRT8P51-201ENST00000438938 274 ntBASIC5.19□□□□□ -1.58
SEC61A2Q9H9S3 AL450263.2-201ENST00000439400 589 ntBASIC5.19□□□□□ -1.58
SEC61A2Q9H9S3 CFL1P4-201ENST00000451536 498 ntBASIC5.19□□□□□ -1.58
SEC61A2Q9H9S3 RPL7P48-201ENST00000461513 746 ntBASIC5.19□□□□□ -1.58
SEC61A2Q9H9S3 AC094085.1-201ENST00000468914 584 ntBASIC5.19□□□□□ -1.58
SEC61A2Q9H9S3 AC104831.1-201ENST00000470024 444 ntTSL 3 BASIC5.19□□□□□ -1.58
SEC61A2Q9H9S3 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC5.19□□□□□ -1.58
SEC61A2Q9H9S3 IGLV3-30-201ENST00000524362 298 ntBASIC5.19□□□□□ -1.58
SEC61A2Q9H9S3 OR5AQ1P-201ENST00000527596 927 ntBASIC5.19□□□□□ -1.58
SEC61A2Q9H9S3 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC5.19□□□□□ -1.58
SEC61A2Q9H9S3 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC5.19□□□□□ -1.58
SEC61A2Q9H9S3 AC123904.3-201ENST00000547218 814 ntBASIC5.19□□□□□ -1.58
SEC61A2Q9H9S3 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC5.19□□□□□ -1.58
SEC61A2Q9H9S3 AC019322.1-201ENST00000571869 389 ntBASIC5.19□□□□□ -1.58
SEC61A2Q9H9S3 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SEC61A2Q9H9S3 MIR4776-2-201ENST00000580204 80 ntBASIC5.19□□□□□ -1.58
SEC61A2Q9H9S3 AC090236.2-201ENST00000587933 1101 ntBASIC5.19□□□□□ -1.58
SEC61A2Q9H9S3 AL513327.3-201ENST00000602618 469 ntBASIC5.19□□□□□ -1.58
SEC61A2Q9H9S3 AC145423.1-201ENST00000605712 336 ntBASIC5.19□□□□□ -1.58
SEC61A2Q9H9S3 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC5.19□□□□□ -1.58
SEC61A2Q9H9S3 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC5.19□□□□□ -1.58
SEC61A2Q9H9S3 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC5.19□□□□□ -1.58
SEC61A2Q9H9S3 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.19□□□□□ -1.58
SEC61A2Q9H9S3 AL355974.3-201ENST00000617383 467 ntBASIC5.19□□□□□ -1.58
SEC61A2Q9H9S3 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.19□□□□□ -1.58
SEC61A2Q9H9S3 AC129915.3-201ENST00000634128 948 ntBASIC5.19□□□□□ -1.58
SEC61A2Q9H9S3 CRYM-AS1-204ENST00000637983 556 ntBASIC5.19□□□□□ -1.58
SEC61A2Q9H9S3 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
SEC61A2Q9H9S3 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
SEC61A2Q9H9S3 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SEC61A2Q9H9S3 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC5.19□□□□□ -1.58
SEC61A2Q9H9S3 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
SEC61A2Q9H9S3 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC5.19□□□□□ -1.58
SEC61A2Q9H9S3 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
SEC61A2Q9H9S3 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC5.19□□□□□ -1.58
SEC61A2Q9H9S3 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.19□□□□□ -1.58
SEC61A2Q9H9S3 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.19□□□□□ -1.58
SEC61A2Q9H9S3 AC011933.2-201ENST00000578539 2790 ntBASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms