Protein–RNA interactions for Protein: Q8NDV3

SMC1B, Structural maintenance of chromosomes protein 1B, humanhuman

Predictions only

Length 1,235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1BQ8NDV3 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC6.08□□□□□ -1.44
SMC1BQ8NDV3 IGBP1P3-201ENST00000447449 1000 ntBASIC6.08□□□□□ -1.44
SMC1BQ8NDV3 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SMC1BQ8NDV3 MRPL42P4-201ENST00000453267 443 ntBASIC6.08□□□□□ -1.44
SMC1BQ8NDV3 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC6.08□□□□□ -1.44
SMC1BQ8NDV3 AC012339.2-201ENST00000523996 453 ntBASIC6.08□□□□□ -1.44
SMC1BQ8NDV3 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SMC1BQ8NDV3 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
SMC1BQ8NDV3 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.08□□□□□ -1.44
SMC1BQ8NDV3 NIFKP8-201ENST00000560500 874 ntBASIC6.08□□□□□ -1.44
SMC1BQ8NDV3 AC138305.2-201ENST00000561595 556 ntTSL 4 BASIC6.08□□□□□ -1.44
SMC1BQ8NDV3 AC002400.1-201ENST00000569310 726 ntBASIC6.08□□□□□ -1.44
SMC1BQ8NDV3 MTCYBP33-201ENST00000575007 1130 ntBASIC6.08□□□□□ -1.44
SMC1BQ8NDV3 AP005119.2-201ENST00000579735 1105 ntBASIC6.08□□□□□ -1.44
SMC1BQ8NDV3 AL022161.1-201ENST00000604390 213 ntBASIC6.08□□□□□ -1.44
SMC1BQ8NDV3 AC245008.1-201ENST00000608123 476 ntBASIC6.08□□□□□ -1.44
SMC1BQ8NDV3 AL450489.1-201ENST00000612071 468 ntBASIC6.08□□□□□ -1.44
SMC1BQ8NDV3 AC107075.1-201ENST00000613695 314 ntBASIC6.08□□□□□ -1.44
SMC1BQ8NDV3 MIR6853-201ENST00000619642 74 ntBASIC6.08□□□□□ -1.44
SMC1BQ8NDV3 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC6.08□□□□□ -1.44
SMC1BQ8NDV3 LINC01619-207ENST00000551843 2205 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SMC1BQ8NDV3 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
SMC1BQ8NDV3 AC068870.3-201ENST00000625077 2536 ntBASIC6.08□□□□□ -1.44
SMC1BQ8NDV3 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SMC1BQ8NDV3 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
SMC1BQ8NDV3 DNM3OS-201ENST00000417354 4358 ntTSL 4 BASIC6.08□□□□□ -1.44
SMC1BQ8NDV3 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC6.08□□□□□ -1.44
SMC1BQ8NDV3 DDX18P4-201ENST00000511690 1966 ntBASIC6.07□□□□□ -1.44
SMC1BQ8NDV3 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SMC1BQ8NDV3 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
SMC1BQ8NDV3 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SMC1BQ8NDV3 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SMC1BQ8NDV3 ADAM24P-201ENST00000398655 2101 ntBASIC6.07□□□□□ -1.44
SMC1BQ8NDV3 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC6.07□□□□□ -1.44
SMC1BQ8NDV3 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SMC1BQ8NDV3 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
SMC1BQ8NDV3 RNU6-761P-201ENST00000384148 107 ntBASIC6.07□□□□□ -1.44
SMC1BQ8NDV3 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SMC1BQ8NDV3 RPL11P3-201ENST00000395256 523 ntBASIC6.07□□□□□ -1.44
SMC1BQ8NDV3 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC6.07□□□□□ -1.44
SMC1BQ8NDV3 RN7SKP182-201ENST00000410772 298 ntBASIC6.07□□□□□ -1.44
SMC1BQ8NDV3 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC6.07□□□□□ -1.44
SMC1BQ8NDV3 AC073410.1-201ENST00000435125 589 ntBASIC6.07□□□□□ -1.44
SMC1BQ8NDV3 HMGB1P45-201ENST00000435986 653 ntBASIC6.07□□□□□ -1.44
SMC1BQ8NDV3 AL359265.1-201ENST00000440296 795 ntBASIC6.07□□□□□ -1.44
SMC1BQ8NDV3 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC6.07□□□□□ -1.44
SMC1BQ8NDV3 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC6.07□□□□□ -1.44
SMC1BQ8NDV3 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC6.07□□□□□ -1.44
SMC1BQ8NDV3 IMPA1P1-201ENST00000510718 842 ntBASIC6.07□□□□□ -1.44
SMC1BQ8NDV3 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC6.07□□□□□ -1.44
SMC1BQ8NDV3 AC010306.1-201ENST00000523223 1117 ntBASIC6.07□□□□□ -1.44
SMC1BQ8NDV3 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC6.07□□□□□ -1.44
SMC1BQ8NDV3 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC6.07□□□□□ -1.44
SMC1BQ8NDV3 ARL6IP1P1-201ENST00000545836 610 ntBASIC6.07□□□□□ -1.44
SMC1BQ8NDV3 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC6.07□□□□□ -1.44
SMC1BQ8NDV3 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC6.07□□□□□ -1.44
SMC1BQ8NDV3 AC020910.3-201ENST00000603701 874 ntBASIC6.07□□□□□ -1.44
SMC1BQ8NDV3 AL358072.1-201ENST00000604156 575 ntBASIC6.07□□□□□ -1.44
SMC1BQ8NDV3 AL133481.2-203ENST00000607558 139 ntBASIC6.07□□□□□ -1.44
SMC1BQ8NDV3 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC6.07□□□□□ -1.44
SMC1BQ8NDV3 AL353726.1-201ENST00000614041 1000 ntBASIC6.07□□□□□ -1.44
SMC1BQ8NDV3 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SMC1BQ8NDV3 AC090246.1-201ENST00000616499 426 ntBASIC6.07□□□□□ -1.44
SMC1BQ8NDV3 AC013727.1-201ENST00000618581 839 ntTSL 5 BASIC6.07□□□□□ -1.44
SMC1BQ8NDV3 AC022509.4-201ENST00000621404 572 ntBASIC6.07□□□□□ -1.44
SMC1BQ8NDV3 AC006840.1-201ENST00000623069 542 ntBASIC6.07□□□□□ -1.44
SMC1BQ8NDV3 AC073869.8-201ENST00000641806 335 ntBASIC6.07□□□□□ -1.44
SMC1BQ8NDV3 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
SMC1BQ8NDV3 GVINP1-202ENST00000531871 7271 ntBASIC6.07□□□□□ -1.44
SMC1BQ8NDV3 CYP3A43-204ENST00000354829 1709 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
SMC1BQ8NDV3 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
SMC1BQ8NDV3 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
SMC1BQ8NDV3 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
SMC1BQ8NDV3 OR4F13P-202ENST00000560066 2054 ntBASIC6.06□□□□□ -1.44
SMC1BQ8NDV3 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SMC1BQ8NDV3 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SMC1BQ8NDV3 AC138907.8-201ENST00000623981 2256 ntBASIC6.06□□□□□ -1.44
SMC1BQ8NDV3 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC6.06□□□□□ -1.44
SMC1BQ8NDV3 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
SMC1BQ8NDV3 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC6.06□□□□□ -1.44
SMC1BQ8NDV3 SELL-201ENST00000236147 2436 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
SMC1BQ8NDV3 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC6.06□□□□□ -1.44
SMC1BQ8NDV3 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
SMC1BQ8NDV3 MTCO1P7-201ENST00000419523 1542 ntBASIC6.06□□□□□ -1.44
SMC1BQ8NDV3 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC6.06□□□□□ -1.44
SMC1BQ8NDV3 RNU6-525P-201ENST00000363685 104 ntBASIC6.06□□□□□ -1.44
SMC1BQ8NDV3 RN7SKP224-201ENST00000364140 325 ntBASIC6.06□□□□□ -1.44
SMC1BQ8NDV3 OR52E6-202ENST00000379946 954 ntBASIC6.06□□□□□ -1.44
SMC1BQ8NDV3 MIR670-201ENST00000390142 98 ntBASIC6.06□□□□□ -1.44
SMC1BQ8NDV3 AL049697.2-201ENST00000403708 294 ntBASIC6.06□□□□□ -1.44
SMC1BQ8NDV3 MIR1303-201ENST00000408625 86 ntBASIC6.06□□□□□ -1.44
SMC1BQ8NDV3 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC6.06□□□□□ -1.44
SMC1BQ8NDV3 PTP4A1P5-201ENST00000420305 455 ntBASIC6.06□□□□□ -1.44
SMC1BQ8NDV3 AL365203.2-201ENST00000423444 196 ntBASIC6.06□□□□□ -1.44
SMC1BQ8NDV3 AC234781.2-201ENST00000426370 994 ntBASIC6.06□□□□□ -1.44
SMC1BQ8NDV3 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC6.06□□□□□ -1.44
SMC1BQ8NDV3 AL390023.1-201ENST00000428836 262 ntBASIC6.06□□□□□ -1.44
SMC1BQ8NDV3 AC090018.1-201ENST00000434369 367 ntBASIC6.06□□□□□ -1.44
SMC1BQ8NDV3 AC093414.1-201ENST00000434712 514 ntBASIC6.06□□□□□ -1.44
SMC1BQ8NDV3 AP000943.1-201ENST00000438416 712 ntTSL 3 BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 196.6 ms