Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 AC068790.7-201ENST00000602347 528 ntBASIC5.25□□□□□ -1.57
SLC44A3Q8N4M1 AL136363.2-201ENST00000604173 851 ntBASIC5.25□□□□□ -1.57
SLC44A3Q8N4M1 AL592148.2-201ENST00000612210 372 ntBASIC5.25□□□□□ -1.57
SLC44A3Q8N4M1 AL139418.1-201ENST00000613613 177 ntBASIC5.25□□□□□ -1.57
SLC44A3Q8N4M1 AC105227.2-201ENST00000615075 605 ntBASIC5.25□□□□□ -1.57
SLC44A3Q8N4M1 AC073968.1-201ENST00000618594 637 ntBASIC5.25□□□□□ -1.57
SLC44A3Q8N4M1 AC018755.4-201ENST00000619715 454 ntBASIC5.25□□□□□ -1.57
SLC44A3Q8N4M1 AL590240.3-201ENST00000621416 943 ntBASIC5.25□□□□□ -1.57
SLC44A3Q8N4M1 AC091932.2-201ENST00000623014 291 ntBASIC5.25□□□□□ -1.57
SLC44A3Q8N4M1 AC092159.4-201ENST00000624944 550 ntBASIC5.25□□□□□ -1.57
SLC44A3Q8N4M1 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.25□□□□□ -1.57
SLC44A3Q8N4M1 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SLC44A3Q8N4M1 AC079097.1-201ENST00000512187 1399 ntBASIC5.25□□□□□ -1.57
SLC44A3Q8N4M1 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.25□□□□□ -1.57
SLC44A3Q8N4M1 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5.25□□□□□ -1.57
SLC44A3Q8N4M1 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
SLC44A3Q8N4M1 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SLC44A3Q8N4M1 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
SLC44A3Q8N4M1 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
SLC44A3Q8N4M1 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SLC44A3Q8N4M1 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.24□□□□□ -1.57
SLC44A3Q8N4M1 MTND5P24-201ENST00000438892 1767 ntBASIC5.24□□□□□ -1.57
SLC44A3Q8N4M1 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SLC44A3Q8N4M1 VN2R3P-201ENST00000422626 1412 ntBASIC5.24□□□□□ -1.57
SLC44A3Q8N4M1 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SLC44A3Q8N4M1 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SLC44A3Q8N4M1 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SLC44A3Q8N4M1 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SLC44A3Q8N4M1 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SLC44A3Q8N4M1 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SLC44A3Q8N4M1 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SLC44A3Q8N4M1 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
SLC44A3Q8N4M1 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
SLC44A3Q8N4M1 RNA5-8SP7-201ENST00000363443 155 ntBASIC5.24□□□□□ -1.57
SLC44A3Q8N4M1 snoZ40.1-201ENST00000364540 72 ntBASIC5.24□□□□□ -1.57
SLC44A3Q8N4M1 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SLC44A3Q8N4M1 SNORA5.1-201ENST00000384275 131 ntBASIC5.24□□□□□ -1.57
SLC44A3Q8N4M1 Y_RNA.465-201ENST00000384293 102 ntBASIC5.24□□□□□ -1.57
SLC44A3Q8N4M1 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC5.24□□□□□ -1.57
SLC44A3Q8N4M1 HMGB3P7-201ENST00000400214 611 ntBASIC5.24□□□□□ -1.57
SLC44A3Q8N4M1 AL079342.2-201ENST00000403367 482 ntBASIC5.24□□□□□ -1.57
SLC44A3Q8N4M1 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC5.24□□□□□ -1.57
SLC44A3Q8N4M1 NPM1P11-201ENST00000417106 855 ntBASIC5.24□□□□□ -1.57
SLC44A3Q8N4M1 AL049610.1-201ENST00000423374 372 ntBASIC5.24□□□□□ -1.57
SLC44A3Q8N4M1 AL359265.2-201ENST00000434367 631 ntBASIC5.24□□□□□ -1.57
SLC44A3Q8N4M1 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.24□□□□□ -1.57
SLC44A3Q8N4M1 AC023271.1-201ENST00000445936 1090 ntBASIC5.24□□□□□ -1.57
SLC44A3Q8N4M1 MTND4P18-201ENST00000447010 465 ntBASIC5.24□□□□□ -1.57
SLC44A3Q8N4M1 SRRM1P2-201ENST00000464531 1192 ntBASIC5.24□□□□□ -1.57
SLC44A3Q8N4M1 AC011979.1-201ENST00000472300 483 ntBASIC5.24□□□□□ -1.57
SLC44A3Q8N4M1 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC5.24□□□□□ -1.57
SLC44A3Q8N4M1 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
SLC44A3Q8N4M1 AC022447.1-201ENST00000515358 464 ntBASIC5.24□□□□□ -1.57
SLC44A3Q8N4M1 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SLC44A3Q8N4M1 OR4A43P-201ENST00000532938 908 ntBASIC5.24□□□□□ -1.57
SLC44A3Q8N4M1 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC5.24□□□□□ -1.57
SLC44A3Q8N4M1 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.24□□□□□ -1.57
SLC44A3Q8N4M1 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.24□□□□□ -1.57
SLC44A3Q8N4M1 AKIRIN1P1-201ENST00000547384 544 ntBASIC5.24□□□□□ -1.57
SLC44A3Q8N4M1 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
SLC44A3Q8N4M1 AC074050.1-201ENST00000563247 211 ntBASIC5.24□□□□□ -1.57
SLC44A3Q8N4M1 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC5.24□□□□□ -1.57
SLC44A3Q8N4M1 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SLC44A3Q8N4M1 AL512782.1-201ENST00000603093 364 ntBASIC5.24□□□□□ -1.57
SLC44A3Q8N4M1 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
SLC44A3Q8N4M1 AC090246.1-201ENST00000616499 426 ntBASIC5.24□□□□□ -1.57
SLC44A3Q8N4M1 AC116165.2-201ENST00000616705 206 ntBASIC5.24□□□□□ -1.57
SLC44A3Q8N4M1 AC109454.4-201ENST00000623411 649 ntBASIC5.24□□□□□ -1.57
SLC44A3Q8N4M1 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
SLC44A3Q8N4M1 AC003973.3-201ENST00000624863 2822 ntBASIC5.24□□□□□ -1.57
SLC44A3Q8N4M1 AC100757.1-201ENST00000616872 1835 ntBASIC5.24□□□□□ -1.57
SLC44A3Q8N4M1 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SLC44A3Q8N4M1 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.24□□□□□ -1.57
SLC44A3Q8N4M1 SAMMSON-226ENST00000642089 1582 ntBASIC5.24□□□□□ -1.57
SLC44A3Q8N4M1 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SLC44A3Q8N4M1 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
SLC44A3Q8N4M1 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
SLC44A3Q8N4M1 ACE2-201ENST00000252519 3393 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
SLC44A3Q8N4M1 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
SLC44A3Q8N4M1 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.24□□□□□ -1.57
SLC44A3Q8N4M1 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
SLC44A3Q8N4M1 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SLC44A3Q8N4M1 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
SLC44A3Q8N4M1 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
SLC44A3Q8N4M1 F9-201ENST00000218099 2780 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SLC44A3Q8N4M1 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
SLC44A3Q8N4M1 AC006206.1-201ENST00000544842 3387 ntBASIC5.23□□□□□ -1.57
SLC44A3Q8N4M1 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SLC44A3Q8N4M1 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SLC44A3Q8N4M1 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
SLC44A3Q8N4M1 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.23□□□□□ -1.57
SLC44A3Q8N4M1 AL391994.1-201ENST00000254724 282 ntBASIC5.23□□□□□ -1.57
SLC44A3Q8N4M1 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
SLC44A3Q8N4M1 AC092681.1-201ENST00000297369 291 ntBASIC5.23□□□□□ -1.57
SLC44A3Q8N4M1 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
SLC44A3Q8N4M1 MAX-203ENST00000341653 330 ntTSL 2 BASIC5.23□□□□□ -1.57
SLC44A3Q8N4M1 RN7SKP185-201ENST00000362813 326 ntBASIC5.23□□□□□ -1.57
SLC44A3Q8N4M1 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC5.23□□□□□ -1.57
SLC44A3Q8N4M1 RNU1-74P-201ENST00000384108 171 ntBASIC5.23□□□□□ -1.57
SLC44A3Q8N4M1 RNU6-549P-201ENST00000384433 107 ntBASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms