Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 MIR8069-1-201ENST00000616627 86 ntBASIC2.52□□□□□ -2.01
VPS13DQ5THJ4 BNIP3P41-202ENST00000616656 861 ntBASIC2.52□□□□□ -2.01
VPS13DQ5THJ4 AL139089.1-201ENST00000620372 975 ntBASIC2.52□□□□□ -2.01
VPS13DQ5THJ4 MIR8069-2-201ENST00000621412 86 ntBASIC2.52□□□□□ -2.01
VPS13DQ5THJ4 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
VPS13DQ5THJ4 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
VPS13DQ5THJ4 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC2.52□□□□□ -2.01
VPS13DQ5THJ4 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC2.52□□□□□ -2.01
VPS13DQ5THJ4 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
VPS13DQ5THJ4 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC2.52□□□□□ -2.01
VPS13DQ5THJ4 DAOA-211ENST00000618629 1368 ntAPPRIS P3 TSL 5 BASIC2.52□□□□□ -2.01
VPS13DQ5THJ4 CLCA3P-202ENST00000466454 3412 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
VPS13DQ5THJ4 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
VPS13DQ5THJ4 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
VPS13DQ5THJ4 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC2.52□□□□□ -2.01
VPS13DQ5THJ4 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
VPS13DQ5THJ4 AC073335.1-201ENST00000427776 363 ntBASIC2.52□□□□□ -2.01
VPS13DQ5THJ4 VN1R25P-201ENST00000443385 738 ntBASIC2.52□□□□□ -2.01
VPS13DQ5THJ4 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC2.52□□□□□ -2.01
VPS13DQ5THJ4 AL031584.1-201ENST00000447169 754 ntBASIC2.52□□□□□ -2.01
VPS13DQ5THJ4 AC233982.1-201ENST00000451247 436 ntBASIC2.52□□□□□ -2.01
VPS13DQ5THJ4 RN7SL271P-201ENST00000487601 295 ntBASIC2.52□□□□□ -2.01
VPS13DQ5THJ4 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC2.52□□□□□ -2.01
VPS13DQ5THJ4 AL355076.2-201ENST00000555736 544 ntTSL 5 BASIC2.52□□□□□ -2.01
VPS13DQ5THJ4 AC012409.1-201ENST00000560176 358 ntTSL 3 BASIC2.52□□□□□ -2.01
VPS13DQ5THJ4 AL442128.2-201ENST00000620246 1824 ntBASIC2.51□□□□□ -2.01
VPS13DQ5THJ4 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
VPS13DQ5THJ4 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC2.51□□□□□ -2.01
VPS13DQ5THJ4 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
VPS13DQ5THJ4 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
VPS13DQ5THJ4 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
VPS13DQ5THJ4 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
VPS13DQ5THJ4 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
VPS13DQ5THJ4 AC004656.1-201ENST00000568479 4951 ntBASIC2.51□□□□□ -2.01
VPS13DQ5THJ4 SNORA80A-201ENST00000363922 136 ntBASIC2.51□□□□□ -2.01
VPS13DQ5THJ4 MTCO1P45-201ENST00000431457 267 ntBASIC2.51□□□□□ -2.01
VPS13DQ5THJ4 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC2.51□□□□□ -2.01
VPS13DQ5THJ4 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.51□□□□□ -2.01
VPS13DQ5THJ4 GNRHR2P1-201ENST00000555315 631 ntBASIC2.51□□□□□ -2.01
VPS13DQ5THJ4 OR51C1P-201ENST00000608504 942 ntBASIC2.51□□□□□ -2.01
VPS13DQ5THJ4 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC2.51□□□□□ -2.01
VPS13DQ5THJ4 AL365440.1-201ENST00000436135 2167 ntBASIC2.51□□□□□ -2.01
VPS13DQ5THJ4 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC2.51□□□□□ -2.01
VPS13DQ5THJ4 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
VPS13DQ5THJ4 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC2.51□□□□□ -2.01
VPS13DQ5THJ4 TRAV34-201ENST00000390461 349 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
VPS13DQ5THJ4 MTND4LP20-201ENST00000402379 270 ntBASIC2.51□□□□□ -2.01
VPS13DQ5THJ4 UBE2V1P1-201ENST00000430836 445 ntBASIC2.51□□□□□ -2.01
VPS13DQ5THJ4 AC037198.2-201ENST00000478845 733 ntBASIC2.51□□□□□ -2.01
VPS13DQ5THJ4 AC037471.2-201ENST00000564941 598 ntBASIC2.51□□□□□ -2.01
VPS13DQ5THJ4 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
VPS13DQ5THJ4 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC2.51□□□□□ -2.01
VPS13DQ5THJ4 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
VPS13DQ5THJ4 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC2.51□□□□□ -2.01
VPS13DQ5THJ4 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC2.51□□□□□ -2.01
VPS13DQ5THJ4 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC2.51□□□□□ -2.01
VPS13DQ5THJ4 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
VPS13DQ5THJ4 TANK-206ENST00000406287 875 ntTSL 5 BASIC2.51□□□□□ -2.01
VPS13DQ5THJ4 DPPA2P2-201ENST00000418220 897 ntBASIC2.51□□□□□ -2.01
VPS13DQ5THJ4 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC2.51□□□□□ -2.01
VPS13DQ5THJ4 DPY19L1P2-201ENST00000426647 915 ntBASIC2.51□□□□□ -2.01
VPS13DQ5THJ4 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC2.51□□□□□ -2.01
VPS13DQ5THJ4 AL353633.1-201ENST00000458480 382 ntTSL 3 BASIC2.51□□□□□ -2.01
VPS13DQ5THJ4 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC2.51□□□□□ -2.01
VPS13DQ5THJ4 AC090136.1-201ENST00000520009 240 ntBASIC2.51□□□□□ -2.01
VPS13DQ5THJ4 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC2.51□□□□□ -2.01
VPS13DQ5THJ4 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
VPS13DQ5THJ4 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC2.51□□□□□ -2.01
VPS13DQ5THJ4 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC2.5□□□□□ -2.01
VPS13DQ5THJ4 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC2.5□□□□□ -2.01
VPS13DQ5THJ4 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC2.5□□□□□ -2.01
VPS13DQ5THJ4 IL6STP1-201ENST00000346911 1020 ntBASIC2.5□□□□□ -2.01
VPS13DQ5THJ4 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.5□□□□□ -2.01
VPS13DQ5THJ4 NDUFB1P1-201ENST00000435191 180 ntBASIC2.5□□□□□ -2.01
VPS13DQ5THJ4 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC2.5□□□□□ -2.01
VPS13DQ5THJ4 RPL26P28-201ENST00000451325 435 ntBASIC2.5□□□□□ -2.01
VPS13DQ5THJ4 AC012158.1-204ENST00000483430 465 ntBASIC2.5□□□□□ -2.01
VPS13DQ5THJ4 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC2.5□□□□□ -2.01
VPS13DQ5THJ4 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC2.5□□□□□ -2.01
VPS13DQ5THJ4 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC2.5□□□□□ -2.01
VPS13DQ5THJ4 AC093535.2-201ENST00000624769 2326 ntBASIC2.5□□□□□ -2.01
VPS13DQ5THJ4 HACD4-202ENST00000495827 8267 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
VPS13DQ5THJ4 USP8P1-201ENST00000494673 3183 ntBASIC2.5□□□□□ -2.01
VPS13DQ5THJ4 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC2.5□□□□□ -2.01
VPS13DQ5THJ4 BTF3P5-201ENST00000457252 467 ntBASIC2.5□□□□□ -2.01
VPS13DQ5THJ4 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC2.5□□□□□ -2.01
VPS13DQ5THJ4 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
VPS13DQ5THJ4 AC012603.1-201ENST00000606424 528 ntBASIC2.5□□□□□ -2.01
VPS13DQ5THJ4 U4.6-201ENST00000621618 127 ntBASIC2.5□□□□□ -2.01
VPS13DQ5THJ4 MIR6852-201ENST00000621699 66 ntBASIC2.5□□□□□ -2.01
VPS13DQ5THJ4 AC138965.3-201ENST00000623875 498 ntBASIC2.5□□□□□ -2.01
VPS13DQ5THJ4 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC2.5□□□□□ -2.01
VPS13DQ5THJ4 ZNF891-201ENST00000537226 15455 ntAPPRIS P1 TSL 2 BASIC2.5□□□□□ -2.01
VPS13DQ5THJ4 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
VPS13DQ5THJ4 ZNF462-201ENST00000277225 10414 ntAPPRIS P2 TSL 1 (best) BASIC2.5□□□□□ -2.01
VPS13DQ5THJ4 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC2.5□□□□□ -2.01
VPS13DQ5THJ4 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC2.5□□□□□ -2.01
VPS13DQ5THJ4 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC2.5□□□□□ -2.01
VPS13DQ5THJ4 FRG1CP-201ENST00000358464 769 ntBASIC2.5□□□□□ -2.01
VPS13DQ5THJ4 AL512649.1-201ENST00000428997 581 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 110.6 ms