Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.83□□□□□ -1.48
EPHB3P54753 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.83□□□□□ -1.48
EPHB3P54753 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC5.83□□□□□ -1.48
EPHB3P54753 AC002553.4-201ENST00000616896 331 ntBASIC5.83□□□□□ -1.48
EPHB3P54753 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.83□□□□□ -1.48
EPHB3P54753 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.83□□□□□ -1.48
EPHB3P54753 VIP-201ENST00000367243 1581 ntAPPRIS ALT1 TSL 1 (best) BASIC5.83□□□□□ -1.48
EPHB3P54753 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.83□□□□□ -1.48
EPHB3P54753 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC5.83□□□□□ -1.48
EPHB3P54753 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
EPHB3P54753 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
EPHB3P54753 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
EPHB3P54753 AP002001.2-201ENST00000529025 1469 ntBASIC5.83□□□□□ -1.48
EPHB3P54753 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
EPHB3P54753 AL360270.2-201ENST00000562952 5985 ntBASIC5.83□□□□□ -1.48
EPHB3P54753 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
EPHB3P54753 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
EPHB3P54753 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.82□□□□□ -1.48
EPHB3P54753 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
EPHB3P54753 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
EPHB3P54753 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC5.82□□□□□ -1.48
EPHB3P54753 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
EPHB3P54753 BCORP1-203ENST00000513194 5093 ntBASIC5.82□□□□□ -1.48
EPHB3P54753 CASC19-280ENST00000642102 1351 ntBASIC5.82□□□□□ -1.48
EPHB3P54753 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
EPHB3P54753 GPR87-201ENST00000260843 1608 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
EPHB3P54753 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
EPHB3P54753 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
EPHB3P54753 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
EPHB3P54753 MGP-201ENST00000228938 694 ntTSL 3 BASIC5.82□□□□□ -1.48
EPHB3P54753 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
EPHB3P54753 AC005294.1-201ENST00000355509 281 ntBASIC5.82□□□□□ -1.48
EPHB3P54753 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
EPHB3P54753 RNA5SP183-201ENST00000362452 119 ntBASIC5.82□□□□□ -1.48
EPHB3P54753 RNA5SP335-201ENST00000363817 110 ntBASIC5.82□□□□□ -1.48
EPHB3P54753 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
EPHB3P54753 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
EPHB3P54753 SNORA70-201ENST00000384436 135 ntBASIC5.82□□□□□ -1.48
EPHB3P54753 MT-TL1-201ENST00000386347 75 ntBASIC5.82□□□□□ -1.48
EPHB3P54753 RN7SKP285-201ENST00000410137 318 ntBASIC5.82□□□□□ -1.48
EPHB3P54753 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC5.82□□□□□ -1.48
EPHB3P54753 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC5.82□□□□□ -1.48
EPHB3P54753 AL139148.1-201ENST00000427122 680 ntBASIC5.82□□□□□ -1.48
EPHB3P54753 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.82□□□□□ -1.48
EPHB3P54753 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC5.82□□□□□ -1.48
EPHB3P54753 AC097499.1-201ENST00000444277 208 ntBASIC5.82□□□□□ -1.48
EPHB3P54753 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
EPHB3P54753 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC5.82□□□□□ -1.48
EPHB3P54753 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC5.82□□□□□ -1.48
EPHB3P54753 PNPLA4P1-201ENST00000458328 305 ntBASIC5.82□□□□□ -1.48
EPHB3P54753 ANK3-207ENST00000460468 677 ntTSL 3 BASIC5.82□□□□□ -1.48
EPHB3P54753 RN7SL610P-201ENST00000463845 291 ntBASIC5.82□□□□□ -1.48
EPHB3P54753 AC079841.1-201ENST00000481228 950 ntBASIC5.82□□□□□ -1.48
EPHB3P54753 RN7SL727P-201ENST00000482164 296 ntBASIC5.82□□□□□ -1.48
EPHB3P54753 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC5.82□□□□□ -1.48
EPHB3P54753 MTCYBP17-201ENST00000503579 789 ntBASIC5.82□□□□□ -1.48
EPHB3P54753 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC5.82□□□□□ -1.48
EPHB3P54753 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.82□□□□□ -1.48
EPHB3P54753 PGAM1P13-201ENST00000507497 754 ntBASIC5.82□□□□□ -1.48
EPHB3P54753 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.82□□□□□ -1.48
EPHB3P54753 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC5.82□□□□□ -1.48
EPHB3P54753 OR5AK3P-201ENST00000527486 1297 ntBASIC5.82□□□□□ -1.48
EPHB3P54753 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC5.82□□□□□ -1.48
EPHB3P54753 AC123904.3-201ENST00000547218 814 ntBASIC5.82□□□□□ -1.48
EPHB3P54753 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC5.82□□□□□ -1.48
EPHB3P54753 AC006960.3-201ENST00000561845 705 ntBASIC5.82□□□□□ -1.48
EPHB3P54753 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC5.82□□□□□ -1.48
EPHB3P54753 AP005119.2-201ENST00000579735 1105 ntBASIC5.82□□□□□ -1.48
EPHB3P54753 MIR4666A-201ENST00000580160 79 ntBASIC5.82□□□□□ -1.48
EPHB3P54753 UBE2V2P2-201ENST00000587677 504 ntBASIC5.82□□□□□ -1.48
EPHB3P54753 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC5.82□□□□□ -1.48
EPHB3P54753 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC5.82□□□□□ -1.48
EPHB3P54753 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
EPHB3P54753 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC5.82□□□□□ -1.48
EPHB3P54753 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
EPHB3P54753 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.82□□□□□ -1.48
EPHB3P54753 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.82□□□□□ -1.48
EPHB3P54753 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
EPHB3P54753 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
EPHB3P54753 AC011504.1-201ENST00000623331 4103 ntBASIC5.82□□□□□ -1.48
EPHB3P54753 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
EPHB3P54753 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.82□□□□□ -1.48
EPHB3P54753 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
EPHB3P54753 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
EPHB3P54753 PHACTR2P1-201ENST00000605639 1414 ntBASIC5.82□□□□□ -1.48
EPHB3P54753 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC5.82□□□□□ -1.48
EPHB3P54753 AC003985.2-201ENST00000562268 1669 ntBASIC5.82□□□□□ -1.48
EPHB3P54753 CHM-201ENST00000357749 5442 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
EPHB3P54753 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
EPHB3P54753 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
EPHB3P54753 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
EPHB3P54753 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.81□□□□□ -1.48
EPHB3P54753 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.81□□□□□ -1.48
EPHB3P54753 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
EPHB3P54753 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
EPHB3P54753 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.81□□□□□ -1.48
EPHB3P54753 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.81□□□□□ -1.48
EPHB3P54753 AC006210.2-201ENST00000367074 1545 ntBASIC5.81□□□□□ -1.48
EPHB3P54753 AC010132.2-201ENST00000295493 1043 ntBASIC5.81□□□□□ -1.48
EPHB3P54753 SNORA4.1-201ENST00000364263 144 ntBASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms