Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SSR1P43307 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SSR1P43307 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
SSR1P43307 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
SSR1P43307 RNU6-891P-201ENST00000384280 111 ntBASIC4.58□□□□□ -1.68
SSR1P43307 PTMAP5-201ENST00000393073 333 ntBASIC4.58□□□□□ -1.68
SSR1P43307 AL034403.1-201ENST00000399414 885 ntBASIC4.58□□□□□ -1.68
SSR1P43307 AL034374.1-201ENST00000406329 351 ntBASIC4.58□□□□□ -1.68
SSR1P43307 RPS16P5-201ENST00000406501 404 ntBASIC4.58□□□□□ -1.68
SSR1P43307 SNORA74C-2-201ENST00000411179 201 ntBASIC4.58□□□□□ -1.68
SSR1P43307 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
SSR1P43307 PRELID3BP10-201ENST00000431957 584 ntBASIC4.58□□□□□ -1.68
SSR1P43307 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC4.58□□□□□ -1.68
SSR1P43307 TRIM31-AS1-204ENST00000440874 549 ntTSL 3 BASIC4.58□□□□□ -1.68
SSR1P43307 AL353764.1-201ENST00000442072 474 ntTSL 2 BASIC4.58□□□□□ -1.68
SSR1P43307 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.58□□□□□ -1.68
SSR1P43307 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.58□□□□□ -1.68
SSR1P43307 MTND2P28-201ENST00000457540 1044 ntBASIC4.58□□□□□ -1.68
SSR1P43307 SNRPGP3-201ENST00000469405 227 ntBASIC4.58□□□□□ -1.68
SSR1P43307 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC4.58□□□□□ -1.68
SSR1P43307 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.58□□□□□ -1.68
SSR1P43307 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC4.58□□□□□ -1.68
SSR1P43307 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC4.58□□□□□ -1.68
SSR1P43307 RNU6-319P-201ENST00000516025 108 ntBASIC4.58□□□□□ -1.68
SSR1P43307 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC4.58□□□□□ -1.68
SSR1P43307 OR5BC1P-201ENST00000529327 739 ntBASIC4.58□□□□□ -1.68
SSR1P43307 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.58□□□□□ -1.68
SSR1P43307 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.58□□□□□ -1.68
SSR1P43307 AC027281.1-201ENST00000574178 758 ntBASIC4.58□□□□□ -1.68
SSR1P43307 RN7SL690P-201ENST00000582087 240 ntBASIC4.58□□□□□ -1.68
SSR1P43307 AC007620.3-201ENST00000608131 497 ntBASIC4.58□□□□□ -1.68
SSR1P43307 FP325313.1-201ENST00000638228 703 ntBASIC4.58□□□□□ -1.68
SSR1P43307 MME-201ENST00000360490 2360 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SSR1P43307 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
SSR1P43307 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.58□□□□□ -1.68
SSR1P43307 ST7-212ENST00000422922 1887 ntTSL 5 BASIC4.58□□□□□ -1.68
SSR1P43307 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
SSR1P43307 AF127577.6-201ENST00000623352 2191 ntBASIC4.57□□□□□ -1.68
SSR1P43307 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SSR1P43307 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SSR1P43307 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.57□□□□□ -1.68
SSR1P43307 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SSR1P43307 OR4K15-201ENST00000305051 1216 ntBASIC4.57□□□□□ -1.68
SSR1P43307 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SSR1P43307 SNORA58B-201ENST00000364259 136 ntBASIC4.57□□□□□ -1.68
SSR1P43307 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SSR1P43307 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.57□□□□□ -1.68
SSR1P43307 TRGV6-201ENST00000417928 299 ntBASIC4.57□□□□□ -1.68
SSR1P43307 FAR2P4-202ENST00000425399 584 ntBASIC4.57□□□□□ -1.68
SSR1P43307 AL451140.1-201ENST00000430534 371 ntTSL 3 BASIC4.57□□□□□ -1.68
SSR1P43307 AL365396.1-201ENST00000430854 671 ntBASIC4.57□□□□□ -1.68
SSR1P43307 AL359265.2-201ENST00000434367 631 ntBASIC4.57□□□□□ -1.68
SSR1P43307 FTH1P16-201ENST00000435241 552 ntBASIC4.57□□□□□ -1.68
SSR1P43307 MAPRE1P3-201ENST00000435438 796 ntBASIC4.57□□□□□ -1.68
SSR1P43307 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC4.57□□□□□ -1.68
SSR1P43307 SDCBP-205ENST00000447267 772 ntTSL 3 BASIC4.57□□□□□ -1.68
SSR1P43307 CCRL1P1-201ENST00000449542 1053 ntBASIC4.57□□□□□ -1.68
SSR1P43307 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.57□□□□□ -1.68
SSR1P43307 C2orf80-207ENST00000453017 722 ntTSL 3 BASIC4.57□□□□□ -1.68
SSR1P43307 UBE2CP3-201ENST00000502715 450 ntBASIC4.57□□□□□ -1.68
SSR1P43307 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC4.57□□□□□ -1.68
SSR1P43307 AC093720.1-201ENST00000505681 714 ntBASIC4.57□□□□□ -1.68
SSR1P43307 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.57□□□□□ -1.68
SSR1P43307 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.57□□□□□ -1.68
SSR1P43307 SEC11B-201ENST00000518383 499 ntBASIC4.57□□□□□ -1.68
SSR1P43307 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.57□□□□□ -1.68
SSR1P43307 PHBP17-201ENST00000528576 541 ntBASIC4.57□□□□□ -1.68
SSR1P43307 AC027804.1-201ENST00000534653 529 ntTSL 2 BASIC4.57□□□□□ -1.68
SSR1P43307 NRG3-205ENST00000537893 1174 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
SSR1P43307 AC063949.1-201ENST00000552900 865 ntBASIC4.57□□□□□ -1.68
SSR1P43307 RPL23AP97-201ENST00000568955 471 ntBASIC4.57□□□□□ -1.68
SSR1P43307 AC006270.2-201ENST00000578523 652 ntBASIC4.57□□□□□ -1.68
SSR1P43307 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.57□□□□□ -1.68
SSR1P43307 AP001160.4-201ENST00000596971 382 ntBASIC4.57□□□□□ -1.68
SSR1P43307 AC005034.4-201ENST00000603612 899 ntBASIC4.57□□□□□ -1.68
SSR1P43307 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC4.57□□□□□ -1.68
SSR1P43307 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC4.57□□□□□ -1.68
SSR1P43307 AC002044.3-201ENST00000623314 541 ntBASIC4.57□□□□□ -1.68
SSR1P43307 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC4.57□□□□□ -1.68
SSR1P43307 SATB1-AS1-259ENST00000629477 853 ntTSL 5 BASIC4.57□□□□□ -1.68
SSR1P43307 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
SSR1P43307 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
SSR1P43307 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.57□□□□□ -1.68
SSR1P43307 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
SSR1P43307 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC4.57□□□□□ -1.68
SSR1P43307 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC4.56□□□□□ -1.68
SSR1P43307 C12orf50-203ENST00000550553 1525 ntTSL 5 BASIC4.56□□□□□ -1.68
SSR1P43307 AADACL2-201ENST00000356517 1487 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SSR1P43307 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SSR1P43307 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SSR1P43307 AC008033.1-201ENST00000216407 1162 ntBASIC4.56□□□□□ -1.68
SSR1P43307 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC4.56□□□□□ -1.68
SSR1P43307 RNU1-130P-201ENST00000363930 160 ntBASIC4.56□□□□□ -1.68
SSR1P43307 RNA5SP175-201ENST00000364275 119 ntBASIC4.56□□□□□ -1.68
SSR1P43307 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC4.56□□□□□ -1.68
SSR1P43307 MIR3065-201ENST00000390137 79 ntBASIC4.56□□□□□ -1.68
SSR1P43307 AC097374.1-203ENST00000400783 485 ntBASIC4.56□□□□□ -1.68
SSR1P43307 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.56□□□□□ -1.68
SSR1P43307 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.56□□□□□ -1.68
SSR1P43307 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.56□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 97.1 ms