Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC4.06□□□□□ -1.76
HTTP42858 AC104763.2-201ENST00000604179 382 ntBASIC4.06□□□□□ -1.76
HTTP42858 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
HTTP42858 MPDZ-215ENST00000541718 7603 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
HTTP42858 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HTTP42858 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
HTTP42858 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
HTTP42858 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC4.06□□□□□ -1.76
HTTP42858 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HTTP42858 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HTTP42858 STON1-GTF2A1L-201ENST00000394751 3534 ntTSL 2 BASIC4.06□□□□□ -1.76
HTTP42858 SNORA3C-201ENST00000408792 125 ntBASIC4.06□□□□□ -1.76
HTTP42858 RPF2P1-201ENST00000424137 906 ntBASIC4.06□□□□□ -1.76
HTTP42858 AL121890.1-201ENST00000435457 205 ntBASIC4.06□□□□□ -1.76
HTTP42858 RPL7P48-201ENST00000461513 746 ntBASIC4.06□□□□□ -1.76
HTTP42858 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC4.06□□□□□ -1.76
HTTP42858 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.06□□□□□ -1.76
HTTP42858 EIF5A2P1-201ENST00000564027 460 ntBASIC4.06□□□□□ -1.76
HTTP42858 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.06□□□□□ -1.76
HTTP42858 AC124312.4-201ENST00000605533 310 ntBASIC4.06□□□□□ -1.76
HTTP42858 AC026422.1-201ENST00000623961 452 ntBASIC4.06□□□□□ -1.76
HTTP42858 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC4.06□□□□□ -1.76
HTTP42858 AC093535.2-201ENST00000624769 2326 ntBASIC4.06□□□□□ -1.76
HTTP42858 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HTTP42858 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC4.06□□□□□ -1.76
HTTP42858 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HTTP42858 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HTTP42858 HSPD1P11-201ENST00000508643 1702 ntBASIC4.06□□□□□ -1.76
HTTP42858 AC024341.1-201ENST00000526444 1552 ntBASIC4.06□□□□□ -1.76
HTTP42858 SNORA48.8-201ENST00000391324 134 ntBASIC4.06□□□□□ -1.76
HTTP42858 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC4.06□□□□□ -1.76
HTTP42858 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC4.06□□□□□ -1.76
HTTP42858 AL121718.1-201ENST00000449463 387 ntTSL 3 BASIC4.06□□□□□ -1.76
HTTP42858 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC4.06□□□□□ -1.76
HTTP42858 MIR3162-201ENST00000581818 82 ntBASIC4.06□□□□□ -1.76
HTTP42858 AL390816.3-201ENST00000604527 1066 ntBASIC4.06□□□□□ -1.76
HTTP42858 MKKS-203ENST00000609375 882 ntTSL 2 BASIC4.06□□□□□ -1.76
HTTP42858 U4.6-201ENST00000621618 127 ntBASIC4.06□□□□□ -1.76
HTTP42858 MIR7702-201ENST00000621931 59 ntBASIC4.06□□□□□ -1.76
HTTP42858 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HTTP42858 AP1G1-201ENST00000299980 6969 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
HTTP42858 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
HTTP42858 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC4.05□□□□□ -1.76
HTTP42858 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
HTTP42858 ZNF807-201ENST00000328088 1707 ntBASIC4.05□□□□□ -1.76
HTTP42858 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HTTP42858 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
HTTP42858 PSG6-202ENST00000292125 1391 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
HTTP42858 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HTTP42858 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HTTP42858 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.05□□□□□ -1.76
HTTP42858 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC4.05□□□□□ -1.76
HTTP42858 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC4.05□□□□□ -1.76
HTTP42858 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC4.05□□□□□ -1.76
HTTP42858 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HTTP42858 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC4.05□□□□□ -1.76
HTTP42858 KMT2C-201ENST00000262189 16862 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HTTP42858 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HTTP42858 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
HTTP42858 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.05□□□□□ -1.76
HTTP42858 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
HTTP42858 RPL36AP10-201ENST00000421785 322 ntBASIC4.05□□□□□ -1.76
HTTP42858 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC4.05□□□□□ -1.76
HTTP42858 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC4.05□□□□□ -1.76
HTTP42858 AL049844.2-201ENST00000604280 628 ntBASIC4.05□□□□□ -1.76
HTTP42858 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
HTTP42858 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
HTTP42858 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
HTTP42858 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HTTP42858 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HTTP42858 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.04□□□□□ -1.76
HTTP42858 STMN1P2-201ENST00000508435 439 ntBASIC4.04□□□□□ -1.76
HTTP42858 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.04□□□□□ -1.76
HTTP42858 AC093732.2-201ENST00000607950 274 ntBASIC4.04□□□□□ -1.76
HTTP42858 LINC02266-201ENST00000610239 1151 ntTSL 3 BASIC4.04□□□□□ -1.76
HTTP42858 DMD-228ENST00000541735 7080 ntTSL 5 BASIC4.04□□□□□ -1.76
HTTP42858 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HTTP42858 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HTTP42858 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
HTTP42858 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.04□□□□□ -1.76
HTTP42858 C4orf33-202ENST00000425929 1588 ntAPPRIS P1 TSL 2 BASIC4.04□□□□□ -1.76
HTTP42858 OR4F6-201ENST00000328882 1238 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
HTTP42858 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC4.04□□□□□ -1.76
HTTP42858 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.04□□□□□ -1.76
HTTP42858 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC4.04□□□□□ -1.76
HTTP42858 AL157762.1-201ENST00000619612 415 ntBASIC4.04□□□□□ -1.76
HTTP42858 SAMMSON-213ENST00000641336 1521 ntBASIC4.04□□□□□ -1.76
HTTP42858 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HTTP42858 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
HTTP42858 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.04□□□□□ -1.76
HTTP42858 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
HTTP42858 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC4.04□□□□□ -1.76
HTTP42858 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC4.04□□□□□ -1.76
HTTP42858 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC4.04□□□□□ -1.76
HTTP42858 SRRM1-203ENST00000447431 3691 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
HTTP42858 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
HTTP42858 SORCS1-210ENST00000622431 6701 ntTSL 5 BASIC4.04□□□□□ -1.76
HTTP42858 HSP90AA4P-202ENST00000506915 2228 ntBASIC4.04□□□□□ -1.76
HTTP42858 AC139783.2-201ENST00000504847 1145 ntBASIC4.04□□□□□ -1.76
HTTP42858 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 131.1 ms