Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 BPY2B-201ENST00000382392 1206 ntAPPRIS P5 TSL 1 (best) BASIC6.58□□□□□ -1.36
LIG1P18858 Y_RNA.450-201ENST00000384198 113 ntBASIC6.58□□□□□ -1.36
LIG1P18858 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
LIG1P18858 RPL11P3-201ENST00000395256 523 ntBASIC6.58□□□□□ -1.36
LIG1P18858 HMGN1P20-201ENST00000411849 300 ntBASIC6.58□□□□□ -1.36
LIG1P18858 AL139413.1-201ENST00000421309 217 ntBASIC6.58□□□□□ -1.36
LIG1P18858 AC104843.2-201ENST00000427666 297 ntBASIC6.58□□□□□ -1.36
LIG1P18858 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC6.58□□□□□ -1.36
LIG1P18858 TEX41-206ENST00000432608 661 ntTSL 3 BASIC6.58□□□□□ -1.36
LIG1P18858 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC6.58□□□□□ -1.36
LIG1P18858 FTH1P16-201ENST00000435241 552 ntBASIC6.58□□□□□ -1.36
LIG1P18858 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC6.58□□□□□ -1.36
LIG1P18858 AC023141.8-201ENST00000442554 208 ntBASIC6.58□□□□□ -1.36
LIG1P18858 BMS1P10-201ENST00000443754 1120 ntBASIC6.58□□□□□ -1.36
LIG1P18858 FDX1P2-201ENST00000450769 375 ntBASIC6.58□□□□□ -1.36
LIG1P18858 DNAJC19P8-201ENST00000452887 259 ntBASIC6.58□□□□□ -1.36
LIG1P18858 CLEC2A-202ENST00000455827 916 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
LIG1P18858 MTND1P11-201ENST00000456661 876 ntBASIC6.58□□□□□ -1.36
LIG1P18858 SNORD42A-201ENST00000459584 64 ntBASIC6.58□□□□□ -1.36
LIG1P18858 AC110749.1-201ENST00000462007 357 ntBASIC6.58□□□□□ -1.36
LIG1P18858 AC092865.4-201ENST00000477936 615 ntBASIC6.58□□□□□ -1.36
LIG1P18858 AC109462.1-201ENST00000491087 368 ntBASIC6.58□□□□□ -1.36
LIG1P18858 AC091133.4-201ENST00000511142 308 ntBASIC6.58□□□□□ -1.36
LIG1P18858 RNU6-416P-201ENST00000516265 103 ntBASIC6.58□□□□□ -1.36
LIG1P18858 FTH1P11-201ENST00000517577 551 ntBASIC6.58□□□□□ -1.36
LIG1P18858 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC6.58□□□□□ -1.36
LIG1P18858 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC6.58□□□□□ -1.36
LIG1P18858 IGJP1-201ENST00000522682 475 ntBASIC6.58□□□□□ -1.36
LIG1P18858 AC109635.6-201ENST00000525487 1113 ntBASIC6.58□□□□□ -1.36
LIG1P18858 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
LIG1P18858 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC6.58□□□□□ -1.36
LIG1P18858 RAB11AP2-201ENST00000545905 639 ntBASIC6.58□□□□□ -1.36
LIG1P18858 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC6.58□□□□□ -1.36
LIG1P18858 PSMB7P1-201ENST00000556349 514 ntBASIC6.58□□□□□ -1.36
LIG1P18858 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC6.58□□□□□ -1.36
LIG1P18858 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC6.58□□□□□ -1.36
LIG1P18858 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC6.58□□□□□ -1.36
LIG1P18858 MIR548AB-201ENST00000584917 84 ntBASIC6.58□□□□□ -1.36
LIG1P18858 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC6.58□□□□□ -1.36
LIG1P18858 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC6.58□□□□□ -1.36
LIG1P18858 AC020914.6-201ENST00000594327 272 ntBASIC6.58□□□□□ -1.36
LIG1P18858 AL117336.2-201ENST00000602435 335 ntBASIC6.58□□□□□ -1.36
LIG1P18858 AP000907.4-201ENST00000604143 237 ntBASIC6.58□□□□□ -1.36
LIG1P18858 AL365503.1-201ENST00000605247 905 ntBASIC6.58□□□□□ -1.36
LIG1P18858 AC145423.1-201ENST00000605712 336 ntBASIC6.58□□□□□ -1.36
LIG1P18858 AC126177.8-201ENST00000618339 1015 ntBASIC6.58□□□□□ -1.36
LIG1P18858 AP001005.3-201ENST00000622049 129 ntBASIC6.58□□□□□ -1.36
LIG1P18858 FAM157B-203ENST00000639350 358 ntBASIC6.58□□□□□ -1.36
LIG1P18858 VPS35P1-201ENST00000563400 1518 ntBASIC6.58□□□□□ -1.36
LIG1P18858 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
LIG1P18858 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC6.58□□□□□ -1.36
LIG1P18858 AC133552.1-201ENST00000569988 4007 ntBASIC6.58□□□□□ -1.36
LIG1P18858 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC6.58□□□□□ -1.36
LIG1P18858 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
LIG1P18858 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
LIG1P18858 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.58□□□□□ -1.36
LIG1P18858 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
LIG1P18858 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
LIG1P18858 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
LIG1P18858 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC6.57□□□□□ -1.36
LIG1P18858 AC090510.1-202ENST00000500850 2017 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
LIG1P18858 AC011447.7-201ENST00000624228 1590 ntBASIC6.57□□□□□ -1.36
LIG1P18858 ZNF480-204ENST00000490272 2238 ntTSL 2 BASIC6.57□□□□□ -1.36
LIG1P18858 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC6.57□□□□□ -1.36
LIG1P18858 ANKRD20A10P-201ENST00000457591 1515 ntBASIC6.57□□□□□ -1.36
LIG1P18858 BMPR1B-202ENST00000394931 1922 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
LIG1P18858 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC6.57□□□□□ -1.36
LIG1P18858 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
LIG1P18858 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
LIG1P18858 TMSB4XP4-201ENST00000323496 618 ntBASIC6.57□□□□□ -1.36
LIG1P18858 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
LIG1P18858 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
LIG1P18858 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
LIG1P18858 AC096921.1-201ENST00000411661 375 ntBASIC6.57□□□□□ -1.36
LIG1P18858 RPL17P12-201ENST00000413391 526 ntBASIC6.57□□□□□ -1.36
LIG1P18858 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC6.57□□□□□ -1.36
LIG1P18858 AC009237.2-201ENST00000421358 284 ntBASIC6.57□□□□□ -1.36
LIG1P18858 AL512649.1-201ENST00000428997 581 ntBASIC6.57□□□□□ -1.36
LIG1P18858 AC079807.1-201ENST00000429993 481 ntBASIC6.57□□□□□ -1.36
LIG1P18858 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.57□□□□□ -1.36
LIG1P18858 UBE2FP3-201ENST00000436366 524 ntBASIC6.57□□□□□ -1.36
LIG1P18858 PCBP2P1-201ENST00000437262 977 ntBASIC6.57□□□□□ -1.36
LIG1P18858 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC6.57□□□□□ -1.36
LIG1P18858 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC6.57□□□□□ -1.36
LIG1P18858 Z99127.3-201ENST00000448158 395 ntBASIC6.57□□□□□ -1.36
LIG1P18858 AP000852.1-201ENST00000472460 573 ntBASIC6.57□□□□□ -1.36
LIG1P18858 AC090013.1-201ENST00000485147 480 ntBASIC6.57□□□□□ -1.36
LIG1P18858 RPSAP51-201ENST00000497462 645 ntBASIC6.57□□□□□ -1.36
LIG1P18858 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC6.57□□□□□ -1.36
LIG1P18858 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
LIG1P18858 ARL2BPP6-201ENST00000512757 439 ntBASIC6.57□□□□□ -1.36
LIG1P18858 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC6.57□□□□□ -1.36
LIG1P18858 AC060775.1-201ENST00000518241 520 ntBASIC6.57□□□□□ -1.36
LIG1P18858 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC6.57□□□□□ -1.36
LIG1P18858 IGLV3-30-201ENST00000524362 298 ntBASIC6.57□□□□□ -1.36
LIG1P18858 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC6.57□□□□□ -1.36
LIG1P18858 AC137627.1-201ENST00000545761 289 ntBASIC6.57□□□□□ -1.36
LIG1P18858 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC6.57□□□□□ -1.36
LIG1P18858 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC6.57□□□□□ -1.36
LIG1P18858 AC091078.2-201ENST00000557145 559 ntBASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 121.4 ms