Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 CNOT6LP1-201ENST00000559681 1462 ntBASIC4.07□□□□□ -1.76
HOXC4P09017 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
HOXC4P09017 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.07□□□□□ -1.76
HOXC4P09017 MIR372-201ENST00000362225 67 ntBASIC4.07□□□□□ -1.76
HOXC4P09017 RN7SKP280-201ENST00000364196 304 ntBASIC4.07□□□□□ -1.76
HOXC4P09017 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HOXC4P09017 RNU6-628P-201ENST00000410675 107 ntBASIC4.07□□□□□ -1.76
HOXC4P09017 RPS23P10-201ENST00000416185 486 ntBASIC4.07□□□□□ -1.76
HOXC4P09017 AC009302.1-201ENST00000417147 390 ntBASIC4.07□□□□□ -1.76
HOXC4P09017 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.07□□□□□ -1.76
HOXC4P09017 AL590609.2-201ENST00000421430 368 ntBASIC4.07□□□□□ -1.76
HOXC4P09017 PDSS1P1-201ENST00000422953 1114 ntBASIC4.07□□□□□ -1.76
HOXC4P09017 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC4.07□□□□□ -1.76
HOXC4P09017 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
HOXC4P09017 PRELID3BP10-201ENST00000431957 584 ntBASIC4.07□□□□□ -1.76
HOXC4P09017 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.07□□□□□ -1.76
HOXC4P09017 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.07□□□□□ -1.76
HOXC4P09017 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC4.07□□□□□ -1.76
HOXC4P09017 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC4.07□□□□□ -1.76
HOXC4P09017 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC4.07□□□□□ -1.76
HOXC4P09017 AC093824.1-201ENST00000508796 343 ntBASIC4.07□□□□□ -1.76
HOXC4P09017 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC4.07□□□□□ -1.76
HOXC4P09017 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.07□□□□□ -1.76
HOXC4P09017 FAM60CP-201ENST00000591086 664 ntBASIC4.07□□□□□ -1.76
HOXC4P09017 AC022916.3-201ENST00000592961 742 ntBASIC4.07□□□□□ -1.76
HOXC4P09017 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC4.07□□□□□ -1.76
HOXC4P09017 AL020997.2-201ENST00000602607 184 ntBASIC4.07□□□□□ -1.76
HOXC4P09017 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.07□□□□□ -1.76
HOXC4P09017 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
HOXC4P09017 SLC35A1-205ENST00000622775 1206 ntTSL 5 BASIC4.07□□□□□ -1.76
HOXC4P09017 AC138907.10-201ENST00000623708 983 ntBASIC4.07□□□□□ -1.76
HOXC4P09017 FAM26D-205ENST00000628083 1117 ntTSL 2 BASIC4.07□□□□□ -1.76
HOXC4P09017 AC055839.1-201ENST00000634467 498 ntBASIC4.07□□□□□ -1.76
HOXC4P09017 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.07□□□□□ -1.76
HOXC4P09017 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC4.07□□□□□ -1.76
HOXC4P09017 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.06□□□□□ -1.76
HOXC4P09017 RLIMP1-201ENST00000339626 1680 ntBASIC4.06□□□□□ -1.76
HOXC4P09017 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
HOXC4P09017 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.06□□□□□ -1.76
HOXC4P09017 AC007342.7-201ENST00000624610 2337 ntBASIC4.06□□□□□ -1.76
HOXC4P09017 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.06□□□□□ -1.76
HOXC4P09017 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
HOXC4P09017 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC4.06□□□□□ -1.76
HOXC4P09017 AC067945.1-201ENST00000342609 618 ntBASIC4.06□□□□□ -1.76
HOXC4P09017 RNA5SP283-201ENST00000365604 119 ntBASIC4.06□□□□□ -1.76
HOXC4P09017 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4.06□□□□□ -1.76
HOXC4P09017 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4.06□□□□□ -1.76
HOXC4P09017 RNU6-178P-201ENST00000384631 104 ntBASIC4.06□□□□□ -1.76
HOXC4P09017 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.06□□□□□ -1.76
HOXC4P09017 HDGFP1-201ENST00000405943 252 ntBASIC4.06□□□□□ -1.76
HOXC4P09017 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC4.06□□□□□ -1.76
HOXC4P09017 MTND2P2-201ENST00000434633 945 ntBASIC4.06□□□□□ -1.76
HOXC4P09017 AC006326.1-201ENST00000445465 787 ntBASIC4.06□□□□□ -1.76
HOXC4P09017 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC4.06□□□□□ -1.76
HOXC4P09017 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC4.06□□□□□ -1.76
HOXC4P09017 AC243772.1-201ENST00000451620 410 ntBASIC4.06□□□□□ -1.76
HOXC4P09017 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC4.06□□□□□ -1.76
HOXC4P09017 RPL31P53-201ENST00000457065 348 ntBASIC4.06□□□□□ -1.76
HOXC4P09017 AC020898.1-201ENST00000474167 787 ntBASIC4.06□□□□□ -1.76
HOXC4P09017 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.06□□□□□ -1.76
HOXC4P09017 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.06□□□□□ -1.76
HOXC4P09017 IFITM8P-201ENST00000522529 394 ntBASIC4.06□□□□□ -1.76
HOXC4P09017 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC4.06□□□□□ -1.76
HOXC4P09017 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC4.06□□□□□ -1.76
HOXC4P09017 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.06□□□□□ -1.76
HOXC4P09017 MIR4286-201ENST00000580651 93 ntBASIC4.06□□□□□ -1.76
HOXC4P09017 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC4.06□□□□□ -1.76
HOXC4P09017 AL139395.1-201ENST00000603662 160 ntBASIC4.06□□□□□ -1.76
HOXC4P09017 AL136370.1-201ENST00000608166 691 ntBASIC4.06□□□□□ -1.76
HOXC4P09017 AC117490.2-201ENST00000610042 594 ntBASIC4.06□□□□□ -1.76
HOXC4P09017 AL590410.1-201ENST00000617925 333 ntBASIC4.06□□□□□ -1.76
HOXC4P09017 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC4.06□□□□□ -1.76
HOXC4P09017 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.06□□□□□ -1.76
HOXC4P09017 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.06□□□□□ -1.76
HOXC4P09017 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.06□□□□□ -1.76
HOXC4P09017 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HOXC4P09017 ORC4-201ENST00000264169 6598 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
HOXC4P09017 GABRA2-202ENST00000381620 2525 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HOXC4P09017 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HOXC4P09017 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.05□□□□□ -1.76
HOXC4P09017 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
HOXC4P09017 Z82217.1-201ENST00000625157 8149 ntBASIC4.05□□□□□ -1.76
HOXC4P09017 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
HOXC4P09017 RNA5SP388-201ENST00000362584 119 ntBASIC4.05□□□□□ -1.76
HOXC4P09017 Y_RNA.126-201ENST00000363382 111 ntBASIC4.05□□□□□ -1.76
HOXC4P09017 AL034403.1-201ENST00000399414 885 ntBASIC4.05□□□□□ -1.76
HOXC4P09017 AL445189.1-201ENST00000405722 338 ntBASIC4.05□□□□□ -1.76
HOXC4P09017 RPL21P65-201ENST00000406094 466 ntBASIC4.05□□□□□ -1.76
HOXC4P09017 HYKK-202ENST00000408962 847 ntTSL 5 BASIC4.05□□□□□ -1.76
HOXC4P09017 AL158073.1-201ENST00000426848 1104 ntBASIC4.05□□□□□ -1.76
HOXC4P09017 TAF1A-AS1-202ENST00000427540 750 ntTSL 2 BASIC4.05□□□□□ -1.76
HOXC4P09017 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.05□□□□□ -1.76
HOXC4P09017 AC017099.1-201ENST00000448261 1028 ntBASIC4.05□□□□□ -1.76
HOXC4P09017 AL162151.2-201ENST00000448875 158 ntBASIC4.05□□□□□ -1.76
HOXC4P09017 AC092691.2-201ENST00000461787 803 ntBASIC4.05□□□□□ -1.76
HOXC4P09017 AC079804.1-201ENST00000461922 436 ntBASIC4.05□□□□□ -1.76
HOXC4P09017 AL049829.1-201ENST00000465411 156 ntBASIC4.05□□□□□ -1.76
HOXC4P09017 LARP7P4-201ENST00000481075 878 ntBASIC4.05□□□□□ -1.76
HOXC4P09017 RN7SL271P-201ENST00000487601 295 ntBASIC4.05□□□□□ -1.76
HOXC4P09017 AL355432.1-201ENST00000522960 564 ntTSL 3 BASIC4.05□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 114.9 ms