Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC4.37□□□□□ -1.71
RETP07949 AC114546.3-201ENST00000623582 1734 ntBASIC4.37□□□□□ -1.71
RETP07949 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.37□□□□□ -1.71
RETP07949 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.37□□□□□ -1.71
RETP07949 AC008725.1-201ENST00000605123 2263 ntBASIC4.37□□□□□ -1.71
RETP07949 AC011266.1-201ENST00000624119 3569 ntBASIC4.37□□□□□ -1.71
RETP07949 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
RETP07949 BCAP29-203ENST00000379119 5773 ntTSL 3 BASIC4.36□□□□□ -1.71
RETP07949 AC009229.4-201ENST00000623854 1947 ntBASIC4.36□□□□□ -1.71
RETP07949 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC4.36□□□□□ -1.71
RETP07949 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC4.36□□□□□ -1.71
RETP07949 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.36□□□□□ -1.71
RETP07949 ARHGAP42P1-201ENST00000507474 1976 ntBASIC4.36□□□□□ -1.71
RETP07949 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
RETP07949 PREPL-205ENST00000409411 4725 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RETP07949 LINC00622-201ENST00000562811 1570 ntBASIC4.36□□□□□ -1.71
RETP07949 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
RETP07949 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
RETP07949 RN7SKP44-201ENST00000363602 316 ntBASIC4.36□□□□□ -1.71
RETP07949 RNU6-1331P-201ENST00000363658 106 ntBASIC4.36□□□□□ -1.71
RETP07949 RNA5SP130-201ENST00000364431 114 ntBASIC4.36□□□□□ -1.71
RETP07949 RNA5SP151-201ENST00000365632 117 ntBASIC4.36□□□□□ -1.71
RETP07949 RPL21P65-201ENST00000406094 466 ntBASIC4.36□□□□□ -1.71
RETP07949 RN7SKP33-201ENST00000410942 340 ntBASIC4.36□□□□□ -1.71
RETP07949 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC4.36□□□□□ -1.71
RETP07949 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC4.36□□□□□ -1.71
RETP07949 AC069157.1-201ENST00000421749 137 ntBASIC4.36□□□□□ -1.71
RETP07949 OR8F1P-201ENST00000425243 930 ntBASIC4.36□□□□□ -1.71
RETP07949 DYNLL1P7-201ENST00000429273 258 ntBASIC4.36□□□□□ -1.71
RETP07949 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.36□□□□□ -1.71
RETP07949 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC4.36□□□□□ -1.71
RETP07949 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC4.36□□□□□ -1.71
RETP07949 RPL23AP52-201ENST00000439311 478 ntBASIC4.36□□□□□ -1.71
RETP07949 AL353748.1-201ENST00000440753 474 ntBASIC4.36□□□□□ -1.71
RETP07949 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC4.36□□□□□ -1.71
RETP07949 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.36□□□□□ -1.71
RETP07949 RPL7P49-201ENST00000471402 708 ntBASIC4.36□□□□□ -1.71
RETP07949 AC090013.1-201ENST00000485147 480 ntBASIC4.36□□□□□ -1.71
RETP07949 RN7SL691P-201ENST00000494487 301 ntBASIC4.36□□□□□ -1.71
RETP07949 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC4.36□□□□□ -1.71
RETP07949 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC4.36□□□□□ -1.71
RETP07949 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.36□□□□□ -1.71
RETP07949 AC008694.2-201ENST00000517591 306 ntBASIC4.36□□□□□ -1.71
RETP07949 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.36□□□□□ -1.71
RETP07949 PPFIA2-AS1-202ENST00000549161 1080 ntTSL 3 BASIC4.36□□□□□ -1.71
RETP07949 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC4.36□□□□□ -1.71
RETP07949 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
RETP07949 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC4.36□□□□□ -1.71
RETP07949 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.36□□□□□ -1.71
RETP07949 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC4.36□□□□□ -1.71
RETP07949 AC079587.1-201ENST00000603846 277 ntBASIC4.36□□□□□ -1.71
RETP07949 AC025175.1-201ENST00000606482 759 ntBASIC4.36□□□□□ -1.71
RETP07949 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
RETP07949 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.36□□□□□ -1.71
RETP07949 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
RETP07949 AC091953.5-201ENST00000622919 233 ntBASIC4.36□□□□□ -1.71
RETP07949 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.36□□□□□ -1.71
RETP07949 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RETP07949 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.36□□□□□ -1.71
RETP07949 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC4.36□□□□□ -1.71
RETP07949 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
RETP07949 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
RETP07949 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.36□□□□□ -1.71
RETP07949 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
RETP07949 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.35□□□□□ -1.71
RETP07949 OR8G1-201ENST00000341493 936 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
RETP07949 RNA5SP22-201ENST00000365393 109 ntBASIC4.35□□□□□ -1.71
RETP07949 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.35□□□□□ -1.71
RETP07949 OR8G2P-201ENST00000412796 908 ntBASIC4.35□□□□□ -1.71
RETP07949 RPL6P29-201ENST00000414863 865 ntBASIC4.35□□□□□ -1.71
RETP07949 TCEA1P4-201ENST00000415066 844 ntBASIC4.35□□□□□ -1.71
RETP07949 AL590806.1-201ENST00000415818 853 ntBASIC4.35□□□□□ -1.71
RETP07949 UBTFL3-201ENST00000418934 1024 ntBASIC4.35□□□□□ -1.71
RETP07949 AL035246.1-201ENST00000433554 1255 ntBASIC4.35□□□□□ -1.71
RETP07949 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.35□□□□□ -1.71
RETP07949 AC069285.2-201ENST00000440210 275 ntBASIC4.35□□□□□ -1.71
RETP07949 AC012671.1-201ENST00000451912 203 ntBASIC4.35□□□□□ -1.71
RETP07949 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC4.35□□□□□ -1.71
RETP07949 AL645939.1-201ENST00000453429 797 ntBASIC4.35□□□□□ -1.71
RETP07949 AL354710.1-201ENST00000453641 246 ntBASIC4.35□□□□□ -1.71
RETP07949 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.35□□□□□ -1.71
RETP07949 UBTFL6-201ENST00000477929 1024 ntBASIC4.35□□□□□ -1.71
RETP07949 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC4.35□□□□□ -1.71
RETP07949 RNA5SP49-201ENST00000516450 115 ntBASIC4.35□□□□□ -1.71
RETP07949 SNORD116-30-201ENST00000516468 85 ntBASIC4.35□□□□□ -1.71
RETP07949 IGLVVI-25-1-201ENST00000521893 249 ntBASIC4.35□□□□□ -1.71
RETP07949 IFITM8P-201ENST00000522529 394 ntBASIC4.35□□□□□ -1.71
RETP07949 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
RETP07949 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC4.35□□□□□ -1.71
RETP07949 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC4.35□□□□□ -1.71
RETP07949 AL161729.3-201ENST00000603533 673 ntBASIC4.35□□□□□ -1.71
RETP07949 AC112230.1-201ENST00000604342 547 ntBASIC4.35□□□□□ -1.71
RETP07949 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC4.35□□□□□ -1.71
RETP07949 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC4.35□□□□□ -1.71
RETP07949 AC015813.4-201ENST00000610469 179 ntBASIC4.35□□□□□ -1.71
RETP07949 AP005212.4-201ENST00000614206 710 ntBASIC4.35□□□□□ -1.71
RETP07949 AC023509.5-201ENST00000617434 807 ntBASIC4.35□□□□□ -1.71
RETP07949 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
RETP07949 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.35□□□□□ -1.71
RETP07949 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 141.3 ms