Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.13□□□□□ -1.75
MT-ND1P03886 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.13□□□□□ -1.75
MT-ND1P03886 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
MT-ND1P03886 LINC01085-201ENST00000502759 1984 ntTSL 2 BASIC4.13□□□□□ -1.75
MT-ND1P03886 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.12□□□□□ -1.75
MT-ND1P03886 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
MT-ND1P03886 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
MT-ND1P03886 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
MT-ND1P03886 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
MT-ND1P03886 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
MT-ND1P03886 CTNNAL1-203ENST00000374594 824 ntTSL 3 BASIC4.12□□□□□ -1.75
MT-ND1P03886 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC4.12□□□□□ -1.75
MT-ND1P03886 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
MT-ND1P03886 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
MT-ND1P03886 MIR659-201ENST00000384963 97 ntBASIC4.12□□□□□ -1.75
MT-ND1P03886 HSPD1P16-201ENST00000402302 394 ntBASIC4.12□□□□□ -1.75
MT-ND1P03886 HMGB1P13-201ENST00000406019 642 ntBASIC4.12□□□□□ -1.75
MT-ND1P03886 AL355143.1-201ENST00000407101 841 ntBASIC4.12□□□□□ -1.75
MT-ND1P03886 SNORA74C-2-201ENST00000411179 201 ntBASIC4.12□□□□□ -1.75
MT-ND1P03886 RNA5SP39-201ENST00000411245 120 ntBASIC4.12□□□□□ -1.75
MT-ND1P03886 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC4.12□□□□□ -1.75
MT-ND1P03886 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC4.12□□□□□ -1.75
MT-ND1P03886 AC015971.1-204ENST00000424788 1147 ntTSL 5 BASIC4.12□□□□□ -1.75
MT-ND1P03886 AL031736.2-201ENST00000426573 787 ntBASIC4.12□□□□□ -1.75
MT-ND1P03886 ELOCP18-201ENST00000434209 337 ntBASIC4.12□□□□□ -1.75
MT-ND1P03886 UBE2V1P3-201ENST00000439651 417 ntBASIC4.12□□□□□ -1.75
MT-ND1P03886 AL353093.1-201ENST00000441292 436 ntBASIC4.12□□□□□ -1.75
MT-ND1P03886 RNFT1P2-201ENST00000443064 757 ntBASIC4.12□□□□□ -1.75
MT-ND1P03886 MTCYBP21-201ENST00000443300 1113 ntBASIC4.12□□□□□ -1.75
MT-ND1P03886 MTOR-AS1-202ENST00000445982 705 ntTSL 5 BASIC4.12□□□□□ -1.75
MT-ND1P03886 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC4.12□□□□□ -1.75
MT-ND1P03886 AC091685.2-201ENST00000454924 864 ntBASIC4.12□□□□□ -1.75
MT-ND1P03886 RPL37P3-201ENST00000456825 293 ntBASIC4.12□□□□□ -1.75
MT-ND1P03886 RPS4XP14-201ENST00000493072 781 ntBASIC4.12□□□□□ -1.75
MT-ND1P03886 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.12□□□□□ -1.75
MT-ND1P03886 AP003102.1-201ENST00000525638 661 ntBASIC4.12□□□□□ -1.75
MT-ND1P03886 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC4.12□□□□□ -1.75
MT-ND1P03886 UBTFL9-201ENST00000534504 1148 ntBASIC4.12□□□□□ -1.75
MT-ND1P03886 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
MT-ND1P03886 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC4.12□□□□□ -1.75
MT-ND1P03886 AL121594.4-201ENST00000556211 1196 ntBASIC4.12□□□□□ -1.75
MT-ND1P03886 AC124068.1-201ENST00000563131 678 ntBASIC4.12□□□□□ -1.75
MT-ND1P03886 AC091042.1-201ENST00000579213 173 ntBASIC4.12□□□□□ -1.75
MT-ND1P03886 AP005119.2-201ENST00000579735 1105 ntBASIC4.12□□□□□ -1.75
MT-ND1P03886 AC103810.2-203ENST00000584959 631 ntTSL 5 BASIC4.12□□□□□ -1.75
MT-ND1P03886 AC091132.5-204ENST00000586348 630 ntTSL 3 BASIC4.12□□□□□ -1.75
MT-ND1P03886 ZRANB2-AS2-212ENST00000590186 686 ntTSL 5 BASIC4.12□□□□□ -1.75
MT-ND1P03886 DNAJC19P3-201ENST00000594491 331 ntBASIC4.12□□□□□ -1.75
MT-ND1P03886 AP003117.1-201ENST00000602771 554 ntBASIC4.12□□□□□ -1.75
MT-ND1P03886 AC020634.1-201ENST00000608701 549 ntBASIC4.12□□□□□ -1.75
MT-ND1P03886 MIR7155-201ENST00000615925 56 ntBASIC4.12□□□□□ -1.75
MT-ND1P03886 LINC00901.1-201ENST00000617252 152 ntBASIC4.12□□□□□ -1.75
MT-ND1P03886 AP000843.1-201ENST00000624880 701 ntBASIC4.12□□□□□ -1.75
MT-ND1P03886 ZNF90P1-201ENST00000480493 1951 ntBASIC4.12□□□□□ -1.75
MT-ND1P03886 IMPG2-201ENST00000193391 8337 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
MT-ND1P03886 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
MT-ND1P03886 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
MT-ND1P03886 ELAVL4-206ENST00000371827 3775 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
MT-ND1P03886 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.12□□□□□ -1.75
MT-ND1P03886 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
MT-ND1P03886 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
MT-ND1P03886 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.11□□□□□ -1.75
MT-ND1P03886 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC4.11□□□□□ -1.75
MT-ND1P03886 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
MT-ND1P03886 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
MT-ND1P03886 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
MT-ND1P03886 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC4.11□□□□□ -1.75
MT-ND1P03886 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
MT-ND1P03886 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
MT-ND1P03886 AL590240.1-201ENST00000334118 313 ntBASIC4.11□□□□□ -1.75
MT-ND1P03886 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.11□□□□□ -1.75
MT-ND1P03886 ELSPBP1-201ENST00000339841 1052 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
MT-ND1P03886 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC4.11□□□□□ -1.75
MT-ND1P03886 GCNT6-201ENST00000379591 934 ntBASIC4.11□□□□□ -1.75
MT-ND1P03886 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
MT-ND1P03886 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.11□□□□□ -1.75
MT-ND1P03886 RNU4-27P-201ENST00000410889 139 ntBASIC4.11□□□□□ -1.75
MT-ND1P03886 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.11□□□□□ -1.75
MT-ND1P03886 IPMKP1-201ENST00000425988 855 ntBASIC4.11□□□□□ -1.75
MT-ND1P03886 NANOGP6-201ENST00000429190 847 ntBASIC4.11□□□□□ -1.75
MT-ND1P03886 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4.11□□□□□ -1.75
MT-ND1P03886 BX119904.1-201ENST00000432026 348 ntBASIC4.11□□□□□ -1.75
MT-ND1P03886 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC4.11□□□□□ -1.75
MT-ND1P03886 ABCF2P2-201ENST00000450549 296 ntBASIC4.11□□□□□ -1.75
MT-ND1P03886 HIGD1AP8-201ENST00000453927 274 ntBASIC4.11□□□□□ -1.75
MT-ND1P03886 FGF7P3-201ENST00000454645 303 ntBASIC4.11□□□□□ -1.75
MT-ND1P03886 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.11□□□□□ -1.75
MT-ND1P03886 AC074386.1-201ENST00000476560 767 ntBASIC4.11□□□□□ -1.75
MT-ND1P03886 NPM1P17-201ENST00000479221 602 ntBASIC4.11□□□□□ -1.75
MT-ND1P03886 MTND4LP2-201ENST00000502312 285 ntBASIC4.11□□□□□ -1.75
MT-ND1P03886 MTCO2P9-201ENST00000503214 694 ntBASIC4.11□□□□□ -1.75
MT-ND1P03886 AC025554.1-201ENST00000505641 188 ntBASIC4.11□□□□□ -1.75
MT-ND1P03886 AC112198.4-201ENST00000515450 351 ntBASIC4.11□□□□□ -1.75
MT-ND1P03886 SNORA31.13-201ENST00000516624 135 ntBASIC4.11□□□□□ -1.75
MT-ND1P03886 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.11□□□□□ -1.75
MT-ND1P03886 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC4.11□□□□□ -1.75
MT-ND1P03886 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.11□□□□□ -1.75
MT-ND1P03886 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC4.11□□□□□ -1.75
MT-ND1P03886 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.11□□□□□ -1.75
MT-ND1P03886 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 135.1 ms