Protein–RNA interactions for Protein: O95476

CTDNEP1, CTD nuclear envelope phosphatase 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1O95476 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CTDNEP1O95476 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CTDNEP1O95476 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CTDNEP1O95476 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CTDNEP1O95476 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CTDNEP1O95476 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CTDNEP1O95476 OR1L3-201ENST00000304820 1118 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
CTDNEP1O95476 PDC-201ENST00000391997 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CTDNEP1O95476 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CTDNEP1O95476 ZNF603P-201ENST00000405613 487 ntBASIC4.44□□□□□ -1.7
CTDNEP1O95476 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC4.44□□□□□ -1.7
CTDNEP1O95476 RPS27AP12-201ENST00000429552 465 ntBASIC4.44□□□□□ -1.7
CTDNEP1O95476 UBDP1-202ENST00000457888 382 ntBASIC4.44□□□□□ -1.7
CTDNEP1O95476 RN7SL93P-201ENST00000463035 293 ntBASIC4.44□□□□□ -1.7
CTDNEP1O95476 AC107015.1-201ENST00000466902 747 ntBASIC4.44□□□□□ -1.7
CTDNEP1O95476 RPS6P4-201ENST00000494693 758 ntBASIC4.44□□□□□ -1.7
CTDNEP1O95476 MTCO1P35-201ENST00000515270 228 ntBASIC4.44□□□□□ -1.7
CTDNEP1O95476 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC4.44□□□□□ -1.7
CTDNEP1O95476 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CTDNEP1O95476 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.44□□□□□ -1.7
CTDNEP1O95476 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CTDNEP1O95476 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC4.44□□□□□ -1.7
CTDNEP1O95476 AC122134.1-201ENST00000565664 1104 ntBASIC4.44□□□□□ -1.7
CTDNEP1O95476 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.44□□□□□ -1.7
CTDNEP1O95476 RN7SL703P-201ENST00000578485 302 ntBASIC4.44□□□□□ -1.7
CTDNEP1O95476 AC023043.4-201ENST00000612081 449 ntBASIC4.44□□□□□ -1.7
CTDNEP1O95476 AC009950.2-201ENST00000636548 183 ntBASIC4.44□□□□□ -1.7
CTDNEP1O95476 OR5AC4P-202ENST00000642086 985 ntBASIC4.44□□□□□ -1.7
CTDNEP1O95476 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CTDNEP1O95476 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
CTDNEP1O95476 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CTDNEP1O95476 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CTDNEP1O95476 AC093535.2-201ENST00000624769 2326 ntBASIC4.43□□□□□ -1.7
CTDNEP1O95476 GKN2-201ENST00000328895 800 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CTDNEP1O95476 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
CTDNEP1O95476 RNU1-18P-201ENST00000363062 164 ntBASIC4.43□□□□□ -1.7
CTDNEP1O95476 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
CTDNEP1O95476 AC003035.1-201ENST00000391359 544 ntTSL 3 BASIC4.43□□□□□ -1.7
CTDNEP1O95476 AC004975.1-201ENST00000428733 208 ntBASIC4.43□□□□□ -1.7
CTDNEP1O95476 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC4.43□□□□□ -1.7
CTDNEP1O95476 HSFY6P-201ENST00000445573 403 ntBASIC4.43□□□□□ -1.7
CTDNEP1O95476 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC4.43□□□□□ -1.7
CTDNEP1O95476 OR9M1P-201ENST00000459641 921 ntBASIC4.43□□□□□ -1.7
CTDNEP1O95476 RPL21P11-201ENST00000461458 483 ntBASIC4.43□□□□□ -1.7
CTDNEP1O95476 AC108941.1-201ENST00000502853 530 ntBASIC4.43□□□□□ -1.7
CTDNEP1O95476 AC108062.1-201ENST00000505133 637 ntTSL 3 BASIC4.43□□□□□ -1.7
CTDNEP1O95476 AC004069.2-201ENST00000505438 1114 ntBASIC4.43□□□□□ -1.7
CTDNEP1O95476 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.43□□□□□ -1.7
CTDNEP1O95476 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.43□□□□□ -1.7
CTDNEP1O95476 AC008802.1-201ENST00000519121 791 ntBASIC4.43□□□□□ -1.7
CTDNEP1O95476 SUMO2P20-201ENST00000520803 283 ntBASIC4.43□□□□□ -1.7
CTDNEP1O95476 AC107016.1-201ENST00000550463 337 ntBASIC4.43□□□□□ -1.7
CTDNEP1O95476 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.43□□□□□ -1.7
CTDNEP1O95476 AC090948.2-201ENST00000607363 564 ntBASIC4.43□□□□□ -1.7
CTDNEP1O95476 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC4.43□□□□□ -1.7
CTDNEP1O95476 ZYXP1-201ENST00000617638 118 ntBASIC4.43□□□□□ -1.7
CTDNEP1O95476 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.43□□□□□ -1.7
CTDNEP1O95476 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.43□□□□□ -1.7
CTDNEP1O95476 BCLAF1-214ENST00000531224 7263 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
CTDNEP1O95476 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
CTDNEP1O95476 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC4.42□□□□□ -1.7
CTDNEP1O95476 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.42□□□□□ -1.7
CTDNEP1O95476 NCAPGP1-201ENST00000505112 1814 ntBASIC4.42□□□□□ -1.7
CTDNEP1O95476 AC107027.3-201ENST00000565095 3473 ntBASIC4.42□□□□□ -1.7
CTDNEP1O95476 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
CTDNEP1O95476 RNU6-1320P-201ENST00000390838 107 ntBASIC4.42□□□□□ -1.7
CTDNEP1O95476 RNU6-1269P-201ENST00000391139 107 ntBASIC4.42□□□□□ -1.7
CTDNEP1O95476 PPIAP31-201ENST00000405422 495 ntBASIC4.42□□□□□ -1.7
CTDNEP1O95476 ZNF736P2Y-201ENST00000416040 1279 ntBASIC4.42□□□□□ -1.7
CTDNEP1O95476 AL353784.1-201ENST00000422842 2300 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CTDNEP1O95476 RLIMP2-201ENST00000427891 1563 ntBASIC4.42□□□□□ -1.7
CTDNEP1O95476 MTND6P18-201ENST00000439477 513 ntBASIC4.42□□□□□ -1.7
CTDNEP1O95476 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC4.42□□□□□ -1.7
CTDNEP1O95476 TPT1P12-201ENST00000448968 492 ntBASIC4.42□□□□□ -1.7
CTDNEP1O95476 RNU6-599P-201ENST00000459383 107 ntBASIC4.42□□□□□ -1.7
CTDNEP1O95476 RNU6-1193P-201ENST00000459461 107 ntBASIC4.42□□□□□ -1.7
CTDNEP1O95476 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC4.42□□□□□ -1.7
CTDNEP1O95476 PPM1AP1-201ENST00000502740 1135 ntBASIC4.42□□□□□ -1.7
CTDNEP1O95476 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.42□□□□□ -1.7
CTDNEP1O95476 AC018442.3-201ENST00000523025 183 ntBASIC4.42□□□□□ -1.7
CTDNEP1O95476 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC4.42□□□□□ -1.7
CTDNEP1O95476 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC4.42□□□□□ -1.7
CTDNEP1O95476 AC006270.1-201ENST00000582889 478 ntTSL 3 BASIC4.42□□□□□ -1.7
CTDNEP1O95476 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CTDNEP1O95476 EIF1P6-201ENST00000600054 334 ntBASIC4.42□□□□□ -1.7
CTDNEP1O95476 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CTDNEP1O95476 RNU6-368P-201ENST00000620928 107 ntBASIC4.42□□□□□ -1.7
CTDNEP1O95476 AC103858.2-201ENST00000621471 543 ntBASIC4.42□□□□□ -1.7
CTDNEP1O95476 RNU6-538P-201ENST00000622329 107 ntBASIC4.42□□□□□ -1.7
CTDNEP1O95476 AC091905.1-201ENST00000624400 311 ntBASIC4.42□□□□□ -1.7
CTDNEP1O95476 AF001550.2-201ENST00000636643 217 ntBASIC4.42□□□□□ -1.7
CTDNEP1O95476 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CTDNEP1O95476 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.42□□□□□ -1.7
CTDNEP1O95476 LINC00561-201ENST00000565815 2738 ntBASIC4.42□□□□□ -1.7
CTDNEP1O95476 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CTDNEP1O95476 DDX18P3-201ENST00000404856 2007 ntBASIC4.41□□□□□ -1.7
CTDNEP1O95476 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC4.41□□□□□ -1.7
CTDNEP1O95476 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
CTDNEP1O95476 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CTDNEP1O95476 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 95.4 ms