Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.09□□□□□ -1.75
TMX2-CTNND1H3BSU7 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.09□□□□□ -1.75
TMX2-CTNND1H3BSU7 PRELID3BP10-201ENST00000431957 584 ntBASIC4.09□□□□□ -1.75
TMX2-CTNND1H3BSU7 RPEP2-201ENST00000432149 701 ntBASIC4.09□□□□□ -1.75
TMX2-CTNND1H3BSU7 RPL23AP89-201ENST00000439324 255 ntBASIC4.09□□□□□ -1.75
TMX2-CTNND1H3BSU7 AL357520.1-201ENST00000441557 453 ntBASIC4.09□□□□□ -1.75
TMX2-CTNND1H3BSU7 LINC00302-201ENST00000444515 302 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
TMX2-CTNND1H3BSU7 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.09□□□□□ -1.75
TMX2-CTNND1H3BSU7 AL162388.1-201ENST00000450912 352 ntBASIC4.09□□□□□ -1.75
TMX2-CTNND1H3BSU7 AL121877.1-201ENST00000453704 622 ntBASIC4.09□□□□□ -1.75
TMX2-CTNND1H3BSU7 EIF4A2P2-201ENST00000455776 1070 ntBASIC4.09□□□□□ -1.75
TMX2-CTNND1H3BSU7 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC4.09□□□□□ -1.75
TMX2-CTNND1H3BSU7 RPS27L-205ENST00000462430 681 ntTSL 2 BASIC4.09□□□□□ -1.75
TMX2-CTNND1H3BSU7 RPL35AP15-201ENST00000468042 339 ntBASIC4.09□□□□□ -1.75
TMX2-CTNND1H3BSU7 PDCD10-206ENST00000470131 1026 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
TMX2-CTNND1H3BSU7 RPL23AP71-201ENST00000470966 469 ntBASIC4.09□□□□□ -1.75
TMX2-CTNND1H3BSU7 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC4.09□□□□□ -1.75
TMX2-CTNND1H3BSU7 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.09□□□□□ -1.75
TMX2-CTNND1H3BSU7 PGBD4P4-201ENST00000509673 613 ntBASIC4.09□□□□□ -1.75
TMX2-CTNND1H3BSU7 AC108064.1-201ENST00000513791 460 ntBASIC4.09□□□□□ -1.75
TMX2-CTNND1H3BSU7 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.09□□□□□ -1.75
TMX2-CTNND1H3BSU7 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
TMX2-CTNND1H3BSU7 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC4.09□□□□□ -1.75
TMX2-CTNND1H3BSU7 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.09□□□□□ -1.75
TMX2-CTNND1H3BSU7 AC138473.1-201ENST00000605717 526 ntBASIC4.09□□□□□ -1.75
TMX2-CTNND1H3BSU7 AC090912.3-201ENST00000609775 533 ntBASIC4.09□□□□□ -1.75
TMX2-CTNND1H3BSU7 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC4.09□□□□□ -1.75
TMX2-CTNND1H3BSU7 AL356863.1-201ENST00000623378 1080 ntBASIC4.09□□□□□ -1.75
TMX2-CTNND1H3BSU7 AC007546.2-201ENST00000623996 360 ntBASIC4.09□□□□□ -1.75
TMX2-CTNND1H3BSU7 AL356121.2-201ENST00000624715 780 ntBASIC4.09□□□□□ -1.75
TMX2-CTNND1H3BSU7 CDRT1-208ENST00000630868 794 ntBASIC4.09□□□□□ -1.75
TMX2-CTNND1H3BSU7 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC4.09□□□□□ -1.75
TMX2-CTNND1H3BSU7 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC4.09□□□□□ -1.75
TMX2-CTNND1H3BSU7 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
TMX2-CTNND1H3BSU7 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
TMX2-CTNND1H3BSU7 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.76
TMX2-CTNND1H3BSU7 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.09□□□□□ -1.76
TMX2-CTNND1H3BSU7 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.76
TMX2-CTNND1H3BSU7 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.09□□□□□ -1.76
TMX2-CTNND1H3BSU7 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
TMX2-CTNND1H3BSU7 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
TMX2-CTNND1H3BSU7 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
TMX2-CTNND1H3BSU7 EED-203ENST00000351625 1696 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
TMX2-CTNND1H3BSU7 MIR372-201ENST00000362225 67 ntBASIC4.08□□□□□ -1.76
TMX2-CTNND1H3BSU7 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
TMX2-CTNND1H3BSU7 ZNF603P-201ENST00000405613 487 ntBASIC4.08□□□□□ -1.76
TMX2-CTNND1H3BSU7 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.08□□□□□ -1.76
TMX2-CTNND1H3BSU7 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.08□□□□□ -1.76
TMX2-CTNND1H3BSU7 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC4.08□□□□□ -1.76
TMX2-CTNND1H3BSU7 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC4.08□□□□□ -1.76
TMX2-CTNND1H3BSU7 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.08□□□□□ -1.76
TMX2-CTNND1H3BSU7 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.08□□□□□ -1.76
TMX2-CTNND1H3BSU7 AC007389.2-201ENST00000434630 306 ntBASIC4.08□□□□□ -1.76
TMX2-CTNND1H3BSU7 UBE2V2P1-201ENST00000434717 398 ntBASIC4.08□□□□□ -1.76
TMX2-CTNND1H3BSU7 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.08□□□□□ -1.76
TMX2-CTNND1H3BSU7 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC4.08□□□□□ -1.76
TMX2-CTNND1H3BSU7 AC239798.3-201ENST00000454459 408 ntBASIC4.08□□□□□ -1.76
TMX2-CTNND1H3BSU7 AC133473.1-201ENST00000455173 299 ntBASIC4.08□□□□□ -1.76
TMX2-CTNND1H3BSU7 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.08□□□□□ -1.76
TMX2-CTNND1H3BSU7 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC4.08□□□□□ -1.76
TMX2-CTNND1H3BSU7 AC010460.1-201ENST00000507087 466 ntBASIC4.08□□□□□ -1.76
TMX2-CTNND1H3BSU7 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
TMX2-CTNND1H3BSU7 SNORD116-30-201ENST00000516468 85 ntBASIC4.08□□□□□ -1.76
TMX2-CTNND1H3BSU7 RNU6-551P-201ENST00000516661 103 ntBASIC4.08□□□□□ -1.76
TMX2-CTNND1H3BSU7 AC012103.1-201ENST00000522281 780 ntTSL 3 BASIC4.08□□□□□ -1.76
TMX2-CTNND1H3BSU7 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC4.08□□□□□ -1.76
TMX2-CTNND1H3BSU7 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC4.08□□□□□ -1.76
TMX2-CTNND1H3BSU7 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.08□□□□□ -1.76
TMX2-CTNND1H3BSU7 AL122126.1-201ENST00000546905 1318 ntBASIC4.08□□□□□ -1.76
TMX2-CTNND1H3BSU7 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC4.08□□□□□ -1.76
TMX2-CTNND1H3BSU7 CD24P2-201ENST00000565486 219 ntBASIC4.08□□□□□ -1.76
TMX2-CTNND1H3BSU7 AL160290.3-201ENST00000604869 165 ntBASIC4.08□□□□□ -1.76
TMX2-CTNND1H3BSU7 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC4.08□□□□□ -1.76
TMX2-CTNND1H3BSU7 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC4.08□□□□□ -1.76
TMX2-CTNND1H3BSU7 MIR4727-201ENST00000622232 55 ntBASIC4.08□□□□□ -1.76
TMX2-CTNND1H3BSU7 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.08□□□□□ -1.76
TMX2-CTNND1H3BSU7 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
TMX2-CTNND1H3BSU7 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC4.08□□□□□ -1.76
TMX2-CTNND1H3BSU7 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.08□□□□□ -1.76
TMX2-CTNND1H3BSU7 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.08□□□□□ -1.76
TMX2-CTNND1H3BSU7 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.08□□□□□ -1.76
TMX2-CTNND1H3BSU7 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.08□□□□□ -1.76
TMX2-CTNND1H3BSU7 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC4.08□□□□□ -1.76
TMX2-CTNND1H3BSU7 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC4.08□□□□□ -1.76
TMX2-CTNND1H3BSU7 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TMX2-CTNND1H3BSU7 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.07□□□□□ -1.76
TMX2-CTNND1H3BSU7 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TMX2-CTNND1H3BSU7 RACGAP1-202ENST00000427314 3229 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
TMX2-CTNND1H3BSU7 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TMX2-CTNND1H3BSU7 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.07□□□□□ -1.76
TMX2-CTNND1H3BSU7 AC027287.1-201ENST00000553115 1453 ntBASIC4.07□□□□□ -1.76
TMX2-CTNND1H3BSU7 CYP1D1P-201ENST00000416662 1433 ntBASIC4.07□□□□□ -1.76
TMX2-CTNND1H3BSU7 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.07□□□□□ -1.76
TMX2-CTNND1H3BSU7 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC4.07□□□□□ -1.76
TMX2-CTNND1H3BSU7 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.07□□□□□ -1.76
TMX2-CTNND1H3BSU7 ZNF736P10Y-201ENST00000403990 1110 ntBASIC4.07□□□□□ -1.76
TMX2-CTNND1H3BSU7 RNU6ATAC-201ENST00000408749 126 ntBASIC4.07□□□□□ -1.76
TMX2-CTNND1H3BSU7 RAB9AP4-201ENST00000415230 609 ntBASIC4.07□□□□□ -1.76
TMX2-CTNND1H3BSU7 AC244453.4-201ENST00000419150 388 ntBASIC4.07□□□□□ -1.76
TMX2-CTNND1H3BSU7 OR8F1P-201ENST00000425243 930 ntBASIC4.07□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms