Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 AC003985.1-201ENST00000414127 362 ntTSL 3 BASIC4.55□□□□□ -1.68
CGB1A6NKQ9 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC4.55□□□□□ -1.68
CGB1A6NKQ9 OR51A5P-201ENST00000415429 942 ntBASIC4.55□□□□□ -1.68
CGB1A6NKQ9 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC4.55□□□□□ -1.68
CGB1A6NKQ9 UBTFL3-201ENST00000418934 1024 ntBASIC4.55□□□□□ -1.68
CGB1A6NKQ9 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC4.55□□□□□ -1.68
CGB1A6NKQ9 RPL7P30-201ENST00000420888 709 ntBASIC4.55□□□□□ -1.68
CGB1A6NKQ9 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC4.55□□□□□ -1.68
CGB1A6NKQ9 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC4.55□□□□□ -1.68
CGB1A6NKQ9 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC4.55□□□□□ -1.68
CGB1A6NKQ9 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC4.55□□□□□ -1.68
CGB1A6NKQ9 CASP12-204ENST00000433738 709 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CGB1A6NKQ9 TUBB4BP6-201ENST00000437576 479 ntBASIC4.55□□□□□ -1.68
CGB1A6NKQ9 AMYP1-201ENST00000440059 1023 ntBASIC4.55□□□□□ -1.68
CGB1A6NKQ9 AC004865.1-201ENST00000442276 1003 ntBASIC4.55□□□□□ -1.68
CGB1A6NKQ9 MTATP6P30-201ENST00000443540 664 ntBASIC4.55□□□□□ -1.68
CGB1A6NKQ9 AL096855.1-202ENST00000444276 439 ntTSL 2 BASIC4.55□□□□□ -1.68
CGB1A6NKQ9 NANOGNBP1-201ENST00000448444 480 ntBASIC4.55□□□□□ -1.68
CGB1A6NKQ9 AL591623.2-201ENST00000449978 222 ntBASIC4.55□□□□□ -1.68
CGB1A6NKQ9 EIF4A1P11-201ENST00000451239 222 ntBASIC4.55□□□□□ -1.68
CGB1A6NKQ9 OR6C5P-201ENST00000452388 923 ntBASIC4.55□□□□□ -1.68
CGB1A6NKQ9 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC4.55□□□□□ -1.68
CGB1A6NKQ9 USP9YP34-201ENST00000453983 808 ntBASIC4.55□□□□□ -1.68
CGB1A6NKQ9 AL122020.1-201ENST00000472287 459 ntBASIC4.55□□□□□ -1.68
CGB1A6NKQ9 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC4.55□□□□□ -1.68
CGB1A6NKQ9 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC4.55□□□□□ -1.68
CGB1A6NKQ9 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC4.55□□□□□ -1.68
CGB1A6NKQ9 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC4.55□□□□□ -1.68
CGB1A6NKQ9 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CGB1A6NKQ9 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC4.55□□□□□ -1.68
CGB1A6NKQ9 HMGB1P44-201ENST00000508597 572 ntBASIC4.55□□□□□ -1.68
CGB1A6NKQ9 MOCS2-206ENST00000510818 1251 ntTSL 5 BASIC4.55□□□□□ -1.68
CGB1A6NKQ9 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.55□□□□□ -1.68
CGB1A6NKQ9 RNA5SP438-201ENST00000516561 112 ntBASIC4.55□□□□□ -1.68
CGB1A6NKQ9 AC087808.1-201ENST00000520501 361 ntBASIC4.55□□□□□ -1.68
CGB1A6NKQ9 AC104036.1-201ENST00000523550 611 ntTSL 3 BASIC4.55□□□□□ -1.68
CGB1A6NKQ9 AP003396.4-201ENST00000527574 265 ntBASIC4.55□□□□□ -1.68
CGB1A6NKQ9 AP003715.1-201ENST00000532109 435 ntTSL 3 BASIC4.55□□□□□ -1.68
CGB1A6NKQ9 PCNAP4-201ENST00000532690 730 ntBASIC4.55□□□□□ -1.68
CGB1A6NKQ9 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC4.55□□□□□ -1.68
CGB1A6NKQ9 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC4.55□□□□□ -1.68
CGB1A6NKQ9 AP000593.3-201ENST00000546065 578 ntTSL 2 BASIC4.55□□□□□ -1.68
CGB1A6NKQ9 AC079905.1-201ENST00000549280 475 ntBASIC4.55□□□□□ -1.68
CGB1A6NKQ9 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC4.55□□□□□ -1.68
CGB1A6NKQ9 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC4.55□□□□□ -1.68
CGB1A6NKQ9 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC4.55□□□□□ -1.68
CGB1A6NKQ9 AC009101.1-201ENST00000568135 242 ntBASIC4.55□□□□□ -1.68
CGB1A6NKQ9 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC4.55□□□□□ -1.68
CGB1A6NKQ9 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC4.55□□□□□ -1.68
CGB1A6NKQ9 AC115085.1-201ENST00000588924 229 ntBASIC4.55□□□□□ -1.68
CGB1A6NKQ9 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC4.55□□□□□ -1.68
CGB1A6NKQ9 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC4.55□□□□□ -1.68
CGB1A6NKQ9 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC4.55□□□□□ -1.68
CGB1A6NKQ9 VN1R92P-201ENST00000598511 928 ntBASIC4.55□□□□□ -1.68
CGB1A6NKQ9 AC010320.2-203ENST00000601745 574 ntTSL 4 BASIC4.55□□□□□ -1.68
CGB1A6NKQ9 AP000860.1-201ENST00000605250 559 ntBASIC4.55□□□□□ -1.68
CGB1A6NKQ9 AC007038.2-201ENST00000608095 740 ntBASIC4.55□□□□□ -1.68
CGB1A6NKQ9 AC006566.1-201ENST00000608943 513 ntBASIC4.55□□□□□ -1.68
CGB1A6NKQ9 AC005962.2-201ENST00000611427 652 ntBASIC4.55□□□□□ -1.68
CGB1A6NKQ9 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC4.55□□□□□ -1.68
CGB1A6NKQ9 MIR6889-201ENST00000613185 59 ntBASIC4.55□□□□□ -1.68
CGB1A6NKQ9 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CGB1A6NKQ9 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC4.55□□□□□ -1.68
CGB1A6NKQ9 AC004009.2-201ENST00000623016 728 ntBASIC4.55□□□□□ -1.68
CGB1A6NKQ9 CR381653.2-201ENST00000624041 768 ntBASIC4.55□□□□□ -1.68
CGB1A6NKQ9 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC4.55□□□□□ -1.68
CGB1A6NKQ9 ATE1-AS1-202ENST00000636460 506 ntBASIC4.55□□□□□ -1.68
CGB1A6NKQ9 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC4.55□□□□□ -1.68
CGB1A6NKQ9 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC4.55□□□□□ -1.68
CGB1A6NKQ9 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CGB1A6NKQ9 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CGB1A6NKQ9 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
CGB1A6NKQ9 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
CGB1A6NKQ9 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
CGB1A6NKQ9 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CGB1A6NKQ9 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC4.55□□□□□ -1.68
CGB1A6NKQ9 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
CGB1A6NKQ9 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CGB1A6NKQ9 TEX21P-201ENST00000447107 1476 ntBASIC4.55□□□□□ -1.68
CGB1A6NKQ9 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CGB1A6NKQ9 AC140134.1-201ENST00000511830 3544 ntBASIC4.55□□□□□ -1.68
CGB1A6NKQ9 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC4.55□□□□□ -1.68
CGB1A6NKQ9 USP9YP4-201ENST00000424401 1745 ntBASIC4.55□□□□□ -1.68
CGB1A6NKQ9 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
CGB1A6NKQ9 EED-206ENST00000527888 1422 ntTSL 2 BASIC4.55□□□□□ -1.68
CGB1A6NKQ9 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC4.54□□□□□ -1.68
CGB1A6NKQ9 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CGB1A6NKQ9 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CGB1A6NKQ9 ATRX-201ENST00000373344 11220 ntAPPRIS P4 TSL 1 (best) BASIC4.54□□□□□ -1.68
CGB1A6NKQ9 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CGB1A6NKQ9 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC4.54□□□□□ -1.68
CGB1A6NKQ9 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.54□□□□□ -1.68
CGB1A6NKQ9 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC4.54□□□□□ -1.68
CGB1A6NKQ9 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CGB1A6NKQ9 AC091305.2-201ENST00000624049 1576 ntBASIC4.54□□□□□ -1.68
CGB1A6NKQ9 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CGB1A6NKQ9 AC090971.4-201ENST00000560291 1800 ntBASIC4.54□□□□□ -1.68
CGB1A6NKQ9 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC4.54□□□□□ -1.68
CGB1A6NKQ9 OR9G4-201ENST00000302957 984 ntBASIC4.54□□□□□ -1.68
CGB1A6NKQ9 AL159987.1-201ENST00000347911 293 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 136 ms