Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 U6.101-201ENST00000637707 76 ntBASIC5.48□□□□□ -1.53
SHISA3A0PJX4 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
SHISA3A0PJX4 ZNF112-201ENST00000337401 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
SHISA3A0PJX4 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SHISA3A0PJX4 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SHISA3A0PJX4 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
SHISA3A0PJX4 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
SHISA3A0PJX4 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SHISA3A0PJX4 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SHISA3A0PJX4 AP000432.2-201ENST00000624164 2048 ntBASIC5.48□□□□□ -1.53
SHISA3A0PJX4 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
SHISA3A0PJX4 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
SHISA3A0PJX4 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
SHISA3A0PJX4 AC092162.3-201ENST00000624511 1624 ntBASIC5.48□□□□□ -1.53
SHISA3A0PJX4 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC5.48□□□□□ -1.53
SHISA3A0PJX4 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC5.48□□□□□ -1.53
SHISA3A0PJX4 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC5.48□□□□□ -1.53
SHISA3A0PJX4 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SHISA3A0PJX4 EDA2R-204ENST00000451436 3464 ntAPPRIS P3 TSL 5 BASIC5.47□□□□□ -1.53
SHISA3A0PJX4 AC010329.1-201ENST00000593903 8328 ntBASIC5.47□□□□□ -1.53
SHISA3A0PJX4 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.47□□□□□ -1.53
SHISA3A0PJX4 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
SHISA3A0PJX4 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
SHISA3A0PJX4 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
SHISA3A0PJX4 NHS-205ENST00000617601 8163 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SHISA3A0PJX4 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.47□□□□□ -1.53
SHISA3A0PJX4 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC5.47□□□□□ -1.53
SHISA3A0PJX4 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
SHISA3A0PJX4 ANTXR2-204ENST00000404191 1469 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SHISA3A0PJX4 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SHISA3A0PJX4 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SHISA3A0PJX4 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
SHISA3A0PJX4 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SHISA3A0PJX4 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SHISA3A0PJX4 PPIAP24-201ENST00000328558 471 ntBASIC5.47□□□□□ -1.53
SHISA3A0PJX4 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.47□□□□□ -1.53
SHISA3A0PJX4 RNU6-456P-201ENST00000384493 107 ntBASIC5.47□□□□□ -1.53
SHISA3A0PJX4 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
SHISA3A0PJX4 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
SHISA3A0PJX4 DHFRP6-201ENST00000401776 268 ntBASIC5.47□□□□□ -1.53
SHISA3A0PJX4 LIPN-201ENST00000404459 1197 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SHISA3A0PJX4 AL133384.1-201ENST00000412744 351 ntBASIC5.47□□□□□ -1.53
SHISA3A0PJX4 RPL12P9-201ENST00000412942 488 ntBASIC5.47□□□□□ -1.53
SHISA3A0PJX4 AC013429.2-201ENST00000418798 781 ntBASIC5.47□□□□□ -1.53
SHISA3A0PJX4 AC048351.1-201ENST00000420064 602 ntBASIC5.47□□□□□ -1.53
SHISA3A0PJX4 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC5.47□□□□□ -1.53
SHISA3A0PJX4 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC5.47□□□□□ -1.53
SHISA3A0PJX4 MTCO3P46-201ENST00000425787 232 ntBASIC5.47□□□□□ -1.53
SHISA3A0PJX4 MTCO2P12-201ENST00000427426 682 ntBASIC5.47□□□□□ -1.53
SHISA3A0PJX4 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC5.47□□□□□ -1.53
SHISA3A0PJX4 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC5.47□□□□□ -1.53
SHISA3A0PJX4 AL731534.1-201ENST00000434711 269 ntBASIC5.47□□□□□ -1.53
SHISA3A0PJX4 RPL36AP15-201ENST00000444514 266 ntBASIC5.47□□□□□ -1.53
SHISA3A0PJX4 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC5.47□□□□□ -1.53
SHISA3A0PJX4 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC5.47□□□□□ -1.53
SHISA3A0PJX4 PRPF38AP1-201ENST00000451976 933 ntBASIC5.47□□□□□ -1.53
SHISA3A0PJX4 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC5.47□□□□□ -1.53
SHISA3A0PJX4 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC5.47□□□□□ -1.53
SHISA3A0PJX4 RPL7P15-201ENST00000461190 712 ntBASIC5.47□□□□□ -1.53
SHISA3A0PJX4 RPL7AP30-201ENST00000482859 796 ntBASIC5.47□□□□□ -1.53
SHISA3A0PJX4 PPP1R11P1-201ENST00000486095 376 ntBASIC5.47□□□□□ -1.53
SHISA3A0PJX4 AC069528.1-201ENST00000490344 705 ntTSL 3 BASIC5.47□□□□□ -1.53
SHISA3A0PJX4 RN7SL284P-201ENST00000498823 275 ntBASIC5.47□□□□□ -1.53
SHISA3A0PJX4 AC092903.2-201ENST00000510244 427 ntTSL 5 BASIC5.47□□□□□ -1.53
SHISA3A0PJX4 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.47□□□□□ -1.53
SHISA3A0PJX4 SOD1P3-201ENST00000518682 454 ntBASIC5.47□□□□□ -1.53
SHISA3A0PJX4 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC5.47□□□□□ -1.53
SHISA3A0PJX4 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC5.47□□□□□ -1.53
SHISA3A0PJX4 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC5.47□□□□□ -1.53
SHISA3A0PJX4 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.47□□□□□ -1.53
SHISA3A0PJX4 HPRT1P3-201ENST00000539521 576 ntBASIC5.47□□□□□ -1.53
SHISA3A0PJX4 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC5.47□□□□□ -1.53
SHISA3A0PJX4 AL121821.2-201ENST00000556081 394 ntBASIC5.47□□□□□ -1.53
SHISA3A0PJX4 AC026956.1-201ENST00000558741 396 ntBASIC5.47□□□□□ -1.53
SHISA3A0PJX4 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC5.47□□□□□ -1.53
SHISA3A0PJX4 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.47□□□□□ -1.53
SHISA3A0PJX4 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC5.47□□□□□ -1.53
SHISA3A0PJX4 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC5.47□□□□□ -1.53
SHISA3A0PJX4 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC5.47□□□□□ -1.53
SHISA3A0PJX4 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.47□□□□□ -1.53
SHISA3A0PJX4 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC5.47□□□□□ -1.53
SHISA3A0PJX4 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC5.47□□□□□ -1.53
SHISA3A0PJX4 AC020916.2-201ENST00000591242 360 ntBASIC5.47□□□□□ -1.53
SHISA3A0PJX4 AC007687.1-201ENST00000602704 304 ntBASIC5.47□□□□□ -1.53
SHISA3A0PJX4 AC025857.2-201ENST00000602711 238 ntBASIC5.47□□□□□ -1.53
SHISA3A0PJX4 AC019257.2-201ENST00000605539 497 ntBASIC5.47□□□□□ -1.53
SHISA3A0PJX4 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC5.47□□□□□ -1.53
SHISA3A0PJX4 AC005858.3-201ENST00000624756 589 ntBASIC5.47□□□□□ -1.53
SHISA3A0PJX4 ASB8-218ENST00000629941 278 ntTSL 5 BASIC5.47□□□□□ -1.53
SHISA3A0PJX4 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC5.47□□□□□ -1.53
SHISA3A0PJX4 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
SHISA3A0PJX4 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SHISA3A0PJX4 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
SHISA3A0PJX4 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
SHISA3A0PJX4 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
SHISA3A0PJX4 AC010401.2-201ENST00000575137 4934 ntBASIC5.47□□□□□ -1.53
SHISA3A0PJX4 AL022323.4-201ENST00000623980 13120 ntBASIC5.47□□□□□ -1.53
SHISA3A0PJX4 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SHISA3A0PJX4 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
SHISA3A0PJX4 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 143.3 ms