Protein–RNA interactions for Protein: Q9UN37

VPS4A, Vacuolar protein sorting-associated protein 4A, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4AQ9UN37 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
VPS4AQ9UN37 GCSHP4-201ENST00000538792 439 ntBASIC4.99□□□□□ -1.61
VPS4AQ9UN37 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
VPS4AQ9UN37 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC4.99□□□□□ -1.61
VPS4AQ9UN37 NBEAP1-201ENST00000554452 979 ntBASIC4.99□□□□□ -1.61
VPS4AQ9UN37 EDDM3DP-201ENST00000554692 434 ntBASIC4.99□□□□□ -1.61
VPS4AQ9UN37 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC4.99□□□□□ -1.61
VPS4AQ9UN37 AC079075.1-201ENST00000559543 878 ntBASIC4.99□□□□□ -1.61
VPS4AQ9UN37 AC087465.1-201ENST00000560574 245 ntBASIC4.99□□□□□ -1.61
VPS4AQ9UN37 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC4.99□□□□□ -1.61
VPS4AQ9UN37 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
VPS4AQ9UN37 MIR5708-201ENST00000579723 85 ntBASIC4.99□□□□□ -1.61
VPS4AQ9UN37 AP001542.2-201ENST00000593141 364 ntBASIC4.99□□□□□ -1.61
VPS4AQ9UN37 Z94722.1-201ENST00000604328 474 ntBASIC4.99□□□□□ -1.61
VPS4AQ9UN37 AL162431.4-201ENST00000604674 411 ntBASIC4.99□□□□□ -1.61
VPS4AQ9UN37 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.99□□□□□ -1.61
VPS4AQ9UN37 MIR378J-201ENST00000611988 109 ntBASIC4.99□□□□□ -1.61
VPS4AQ9UN37 EIF3FP1-201ENST00000613970 806 ntBASIC4.99□□□□□ -1.61
VPS4AQ9UN37 AL157770.1-201ENST00000623049 439 ntBASIC4.99□□□□□ -1.61
VPS4AQ9UN37 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC4.99□□□□□ -1.61
VPS4AQ9UN37 MIR3974-201ENST00000637126 96 ntBASIC4.99□□□□□ -1.61
VPS4AQ9UN37 LINC01739-205ENST00000641890 573 ntBASIC4.99□□□□□ -1.61
VPS4AQ9UN37 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
VPS4AQ9UN37 MAPK10-349ENST00000641767 3661 ntBASIC4.99□□□□□ -1.61
VPS4AQ9UN37 AL158066.1-201ENST00000451298 3796 ntTSL 2 BASIC4.99□□□□□ -1.61
VPS4AQ9UN37 BX005019.1-201ENST00000561881 1810 ntBASIC4.99□□□□□ -1.61
VPS4AQ9UN37 PDCD1LG2-201ENST00000397747 2365 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
VPS4AQ9UN37 AC011447.7-201ENST00000624228 1590 ntBASIC4.99□□□□□ -1.61
VPS4AQ9UN37 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.99□□□□□ -1.61
VPS4AQ9UN37 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC4.98□□□□□ -1.61
VPS4AQ9UN37 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC4.98□□□□□ -1.61
VPS4AQ9UN37 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4.98□□□□□ -1.61
VPS4AQ9UN37 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
VPS4AQ9UN37 RMST-202ENST00000541282 2099 ntTSL 2 BASIC4.98□□□□□ -1.61
VPS4AQ9UN37 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
VPS4AQ9UN37 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
VPS4AQ9UN37 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC4.98□□□□□ -1.61
VPS4AQ9UN37 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
VPS4AQ9UN37 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
VPS4AQ9UN37 AC017079.1-201ENST00000333650 415 ntBASIC4.98□□□□□ -1.61
VPS4AQ9UN37 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
VPS4AQ9UN37 AC093719.1-202ENST00000392735 373 ntBASIC4.98□□□□□ -1.61
VPS4AQ9UN37 CYB5AP4-201ENST00000396692 399 ntBASIC4.98□□□□□ -1.61
VPS4AQ9UN37 AC013442.1-201ENST00000397347 228 ntBASIC4.98□□□□□ -1.61
VPS4AQ9UN37 AL356131.1-201ENST00000405826 414 ntBASIC4.98□□□□□ -1.61
VPS4AQ9UN37 AL356967.1-201ENST00000406305 431 ntBASIC4.98□□□□□ -1.61
VPS4AQ9UN37 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC4.98□□□□□ -1.61
VPS4AQ9UN37 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC4.98□□□□□ -1.61
VPS4AQ9UN37 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC4.98□□□□□ -1.61
VPS4AQ9UN37 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC4.98□□□□□ -1.61
VPS4AQ9UN37 AC022022.1-201ENST00000430304 178 ntBASIC4.98□□□□□ -1.61
VPS4AQ9UN37 AL161722.2-201ENST00000434731 981 ntBASIC4.98□□□□□ -1.61
VPS4AQ9UN37 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
VPS4AQ9UN37 BX842559.2-201ENST00000451418 605 ntBASIC4.98□□□□□ -1.61
VPS4AQ9UN37 Z99127.1-201ENST00000452442 670 ntTSL 5 BASIC4.98□□□□□ -1.61
VPS4AQ9UN37 AL035404.1-201ENST00000497982 568 ntBASIC4.98□□□□□ -1.61
VPS4AQ9UN37 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC4.98□□□□□ -1.61
VPS4AQ9UN37 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC4.98□□□□□ -1.61
VPS4AQ9UN37 FABP5P12-201ENST00000515543 389 ntBASIC4.98□□□□□ -1.61
VPS4AQ9UN37 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC4.98□□□□□ -1.61
VPS4AQ9UN37 HMGB1P19-201ENST00000517578 577 ntBASIC4.98□□□□□ -1.61
VPS4AQ9UN37 AC023632.1-201ENST00000518463 375 ntBASIC4.98□□□□□ -1.61
VPS4AQ9UN37 RAB9BP1-201ENST00000519581 626 ntBASIC4.98□□□□□ -1.61
VPS4AQ9UN37 C1GALT1P3-201ENST00000522049 819 ntBASIC4.98□□□□□ -1.61
VPS4AQ9UN37 IGJP1-201ENST00000522682 475 ntBASIC4.98□□□□□ -1.61
VPS4AQ9UN37 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC4.98□□□□□ -1.61
VPS4AQ9UN37 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
VPS4AQ9UN37 AC044913.1-201ENST00000557200 430 ntBASIC4.98□□□□□ -1.61
VPS4AQ9UN37 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.98□□□□□ -1.61
VPS4AQ9UN37 AADACP1-206ENST00000561502 1193 ntBASIC4.98□□□□□ -1.61
VPS4AQ9UN37 MIR3912-201ENST00000577566 105 ntBASIC4.98□□□□□ -1.61
VPS4AQ9UN37 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.98□□□□□ -1.61
VPS4AQ9UN37 ZNF283-207ENST00000593164 1260 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
VPS4AQ9UN37 MRPS35P3-201ENST00000603189 709 ntBASIC4.98□□□□□ -1.61
VPS4AQ9UN37 AC095055.1-201ENST00000603472 1113 ntBASIC4.98□□□□□ -1.61
VPS4AQ9UN37 AP005137.2-201ENST00000609238 400 ntBASIC4.98□□□□□ -1.61
VPS4AQ9UN37 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
VPS4AQ9UN37 AC131159.1-201ENST00000621854 213 ntBASIC4.98□□□□□ -1.61
VPS4AQ9UN37 DARS-AS1-230ENST00000631306 530 ntTSL 5 BASIC4.98□□□□□ -1.61
VPS4AQ9UN37 AC245088.3-201ENST00000634383 424 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
VPS4AQ9UN37 MTND5P31-201ENST00000419366 1374 ntBASIC4.98□□□□□ -1.61
VPS4AQ9UN37 HSPA8P17-201ENST00000427029 1382 ntBASIC4.98□□□□□ -1.61
VPS4AQ9UN37 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
VPS4AQ9UN37 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
VPS4AQ9UN37 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
VPS4AQ9UN37 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
VPS4AQ9UN37 ZNF736P9Y-201ENST00000439586 1345 ntBASIC4.97□□□□□ -1.61
VPS4AQ9UN37 DDX18P5-201ENST00000534547 1306 ntBASIC4.97□□□□□ -1.61
VPS4AQ9UN37 AC006210.2-201ENST00000367074 1545 ntBASIC4.97□□□□□ -1.61
VPS4AQ9UN37 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
VPS4AQ9UN37 SLC25A46-208ENST00000513807 1546 ntTSL 2 BASIC4.97□□□□□ -1.61
VPS4AQ9UN37 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
VPS4AQ9UN37 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
VPS4AQ9UN37 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
VPS4AQ9UN37 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
VPS4AQ9UN37 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
VPS4AQ9UN37 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
VPS4AQ9UN37 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
VPS4AQ9UN37 AC063976.2-201ENST00000425667 3556 ntBASIC4.97□□□□□ -1.61
VPS4AQ9UN37 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 135.4 ms