Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AC006064.5-201ENST00000541782 248 ntBASIC3.8□□□□□ -1.8
CLCF1Q9UBD9 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC3.8□□□□□ -1.8
CLCF1Q9UBD9 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.8□□□□□ -1.8
CLCF1Q9UBD9 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
CLCF1Q9UBD9 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC3.8□□□□□ -1.8
CLCF1Q9UBD9 AC067959.1-201ENST00000604334 379 ntBASIC3.8□□□□□ -1.8
CLCF1Q9UBD9 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC3.8□□□□□ -1.8
CLCF1Q9UBD9 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC3.8□□□□□ -1.8
CLCF1Q9UBD9 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.8□□□□□ -1.8
CLCF1Q9UBD9 AL158196.1-201ENST00000616786 434 ntBASIC3.8□□□□□ -1.8
CLCF1Q9UBD9 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.8□□□□□ -1.8
CLCF1Q9UBD9 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC3.8□□□□□ -1.8
CLCF1Q9UBD9 DDAH1-206ENST00000633113 703 ntTSL 2 BASIC3.8□□□□□ -1.8
CLCF1Q9UBD9 AC008013.2-202ENST00000637965 364 ntBASIC3.8□□□□□ -1.8
CLCF1Q9UBD9 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CLCF1Q9UBD9 UGT2A3-201ENST00000251566 2965 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
CLCF1Q9UBD9 AC091046.3-201ENST00000631455 1574 ntBASIC3.8□□□□□ -1.8
CLCF1Q9UBD9 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC3.8□□□□□ -1.8
CLCF1Q9UBD9 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
CLCF1Q9UBD9 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC3.79□□□□□ -1.8
CLCF1Q9UBD9 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CLCF1Q9UBD9 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
CLCF1Q9UBD9 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CLCF1Q9UBD9 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
CLCF1Q9UBD9 CFHR1-201ENST00000320493 1271 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CLCF1Q9UBD9 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC3.79□□□□□ -1.8
CLCF1Q9UBD9 RNU1-20P-201ENST00000363314 162 ntBASIC3.79□□□□□ -1.8
CLCF1Q9UBD9 RNA5SP22-201ENST00000365393 109 ntBASIC3.79□□□□□ -1.8
CLCF1Q9UBD9 RNU6-532P-201ENST00000384318 107 ntBASIC3.79□□□□□ -1.8
CLCF1Q9UBD9 AL121834.1-202ENST00000404494 277 ntBASIC3.79□□□□□ -1.8
CLCF1Q9UBD9 MIR1193-201ENST00000408109 78 ntBASIC3.79□□□□□ -1.8
CLCF1Q9UBD9 RN7SKP222-201ENST00000410651 315 ntBASIC3.79□□□□□ -1.8
CLCF1Q9UBD9 RN7SKP182-201ENST00000410772 298 ntBASIC3.79□□□□□ -1.8
CLCF1Q9UBD9 RN7SKP33-201ENST00000410942 340 ntBASIC3.79□□□□□ -1.8
CLCF1Q9UBD9 RN7SKP263-201ENST00000411194 309 ntBASIC3.79□□□□□ -1.8
CLCF1Q9UBD9 EIF4A1P3-201ENST00000411521 244 ntBASIC3.79□□□□□ -1.8
CLCF1Q9UBD9 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC3.79□□□□□ -1.8
CLCF1Q9UBD9 AC138024.1-201ENST00000420867 699 ntTSL 3 BASIC3.79□□□□□ -1.8
CLCF1Q9UBD9 FAM204CP-201ENST00000424489 642 ntBASIC3.79□□□□□ -1.8
CLCF1Q9UBD9 COX6B1P7-201ENST00000430845 235 ntBASIC3.79□□□□□ -1.8
CLCF1Q9UBD9 MTND2P21-201ENST00000436242 1042 ntBASIC3.79□□□□□ -1.8
CLCF1Q9UBD9 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC3.79□□□□□ -1.8
CLCF1Q9UBD9 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.79□□□□□ -1.8
CLCF1Q9UBD9 TPRKBP1-201ENST00000456243 481 ntBASIC3.79□□□□□ -1.8
CLCF1Q9UBD9 RPS7P7-201ENST00000463499 571 ntBASIC3.79□□□□□ -1.8
CLCF1Q9UBD9 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC3.79□□□□□ -1.8
CLCF1Q9UBD9 AC104164.2-201ENST00000496953 495 ntBASIC3.79□□□□□ -1.8
CLCF1Q9UBD9 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC3.79□□□□□ -1.8
CLCF1Q9UBD9 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC3.79□□□□□ -1.8
CLCF1Q9UBD9 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC3.79□□□□□ -1.8
CLCF1Q9UBD9 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC3.79□□□□□ -1.8
CLCF1Q9UBD9 MIR2116-201ENST00000517221 80 ntBASIC3.79□□□□□ -1.8
CLCF1Q9UBD9 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CLCF1Q9UBD9 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC3.79□□□□□ -1.8
CLCF1Q9UBD9 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC3.79□□□□□ -1.8
CLCF1Q9UBD9 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC3.79□□□□□ -1.8
CLCF1Q9UBD9 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC3.79□□□□□ -1.8
CLCF1Q9UBD9 C15orf41-203ENST00000562489 715 ntTSL 2 BASIC3.79□□□□□ -1.8
CLCF1Q9UBD9 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.79□□□□□ -1.8
CLCF1Q9UBD9 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.79□□□□□ -1.8
CLCF1Q9UBD9 RN7SL600P-201ENST00000581811 299 ntBASIC3.79□□□□□ -1.8
CLCF1Q9UBD9 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC3.79□□□□□ -1.8
CLCF1Q9UBD9 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.79□□□□□ -1.8
CLCF1Q9UBD9 LINC01081-201ENST00000597373 465 ntTSL 5 BASIC3.79□□□□□ -1.8
CLCF1Q9UBD9 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.79□□□□□ -1.8
CLCF1Q9UBD9 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC3.79□□□□□ -1.8
CLCF1Q9UBD9 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC3.79□□□□□ -1.8
CLCF1Q9UBD9 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CLCF1Q9UBD9 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CLCF1Q9UBD9 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
CLCF1Q9UBD9 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CLCF1Q9UBD9 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC3.79□□□□□ -1.8
CLCF1Q9UBD9 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.79□□□□□ -1.8
CLCF1Q9UBD9 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC3.79□□□□□ -1.8
CLCF1Q9UBD9 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CLCF1Q9UBD9 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CLCF1Q9UBD9 AC018529.3-201ENST00000624212 2254 ntBASIC3.78□□□□□ -1.8
CLCF1Q9UBD9 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
CLCF1Q9UBD9 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CLCF1Q9UBD9 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
CLCF1Q9UBD9 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CLCF1Q9UBD9 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.78□□□□□ -1.8
CLCF1Q9UBD9 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.78□□□□□ -1.8
CLCF1Q9UBD9 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CLCF1Q9UBD9 ADGRG2-201ENST00000340581 3594 ntTSL 2 BASIC3.78□□□□□ -1.8
CLCF1Q9UBD9 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CLCF1Q9UBD9 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CLCF1Q9UBD9 RNU6-666P-201ENST00000363499 107 ntBASIC3.78□□□□□ -1.8
CLCF1Q9UBD9 OR5L2-201ENST00000378397 936 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CLCF1Q9UBD9 CCNB2P1-201ENST00000399411 1150 ntBASIC3.78□□□□□ -1.8
CLCF1Q9UBD9 RANP4-201ENST00000413361 655 ntBASIC3.78□□□□□ -1.8
CLCF1Q9UBD9 AC009237.10-201ENST00000414112 510 ntBASIC3.78□□□□□ -1.8
CLCF1Q9UBD9 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC3.78□□□□□ -1.8
CLCF1Q9UBD9 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.78□□□□□ -1.8
CLCF1Q9UBD9 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC3.78□□□□□ -1.8
CLCF1Q9UBD9 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CLCF1Q9UBD9 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC3.78□□□□□ -1.8
CLCF1Q9UBD9 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.78□□□□□ -1.8
CLCF1Q9UBD9 OR4C10P-201ENST00000434991 931 ntBASIC3.78□□□□□ -1.8
CLCF1Q9UBD9 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 75.6 ms