Protein–RNA interactions for Protein: Q9H4W6

EBF3, Transcription factor COE3, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3Q9H4W6 CD86-203ENST00000393627 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
EBF3Q9H4W6 DHX40P1-201ENST00000588725 1412 ntBASIC4.98□□□□□ -1.61
EBF3Q9H4W6 RBPJP2-201ENST00000618187 1444 ntBASIC4.98□□□□□ -1.61
EBF3Q9H4W6 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
EBF3Q9H4W6 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
EBF3Q9H4W6 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
EBF3Q9H4W6 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
EBF3Q9H4W6 THAP6-202ENST00000380837 3423 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
EBF3Q9H4W6 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
EBF3Q9H4W6 OR4K15-201ENST00000305051 1216 ntBASIC4.98□□□□□ -1.61
EBF3Q9H4W6 SNORA73.1-201ENST00000363107 205 ntBASIC4.98□□□□□ -1.61
EBF3Q9H4W6 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
EBF3Q9H4W6 RNU6-207P-201ENST00000384137 107 ntBASIC4.98□□□□□ -1.61
EBF3Q9H4W6 AL049697.2-201ENST00000403708 294 ntBASIC4.98□□□□□ -1.61
EBF3Q9H4W6 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
EBF3Q9H4W6 RNA5SP345-201ENST00000410646 108 ntBASIC4.98□□□□□ -1.61
EBF3Q9H4W6 AL391645.1-201ENST00000417409 506 ntTSL 3 BASIC4.98□□□□□ -1.61
EBF3Q9H4W6 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC4.98□□□□□ -1.61
EBF3Q9H4W6 AC104462.2-201ENST00000418402 271 ntTSL 3 BASIC4.98□□□□□ -1.61
EBF3Q9H4W6 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC4.98□□□□□ -1.61
EBF3Q9H4W6 AC234781.2-201ENST00000426370 994 ntBASIC4.98□□□□□ -1.61
EBF3Q9H4W6 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC4.98□□□□□ -1.61
EBF3Q9H4W6 ARF4P4-201ENST00000439608 520 ntBASIC4.98□□□□□ -1.61
EBF3Q9H4W6 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC4.98□□□□□ -1.61
EBF3Q9H4W6 AC073052.1-201ENST00000440417 714 ntBASIC4.98□□□□□ -1.61
EBF3Q9H4W6 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC4.98□□□□□ -1.61
EBF3Q9H4W6 ARL2BPP10-201ENST00000446487 531 ntBASIC4.98□□□□□ -1.61
EBF3Q9H4W6 ELOCP30-201ENST00000447108 299 ntBASIC4.98□□□□□ -1.61
EBF3Q9H4W6 MRPL35P2-201ENST00000448009 511 ntBASIC4.98□□□□□ -1.61
EBF3Q9H4W6 AC092155.2-201ENST00000454675 477 ntBASIC4.98□□□□□ -1.61
EBF3Q9H4W6 USP9YP10-201ENST00000454868 628 ntBASIC4.98□□□□□ -1.61
EBF3Q9H4W6 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC4.98□□□□□ -1.61
EBF3Q9H4W6 AC092691.2-201ENST00000461787 803 ntBASIC4.98□□□□□ -1.61
EBF3Q9H4W6 OR52A4P-201ENST00000472867 958 ntBASIC4.98□□□□□ -1.61
EBF3Q9H4W6 SYT14P1-201ENST00000481459 721 ntBASIC4.98□□□□□ -1.61
EBF3Q9H4W6 AC026979.1-201ENST00000492525 396 ntBASIC4.98□□□□□ -1.61
EBF3Q9H4W6 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC4.98□□□□□ -1.61
EBF3Q9H4W6 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.98□□□□□ -1.61
EBF3Q9H4W6 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.98□□□□□ -1.61
EBF3Q9H4W6 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC4.98□□□□□ -1.61
EBF3Q9H4W6 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
EBF3Q9H4W6 AF213884.2-201ENST00000510417 903 ntBASIC4.98□□□□□ -1.61
EBF3Q9H4W6 USP9YP5-201ENST00000511770 630 ntBASIC4.98□□□□□ -1.61
EBF3Q9H4W6 RNU2-30P-201ENST00000516209 141 ntBASIC4.98□□□□□ -1.61
EBF3Q9H4W6 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4.98□□□□□ -1.61
EBF3Q9H4W6 AC090819.1-201ENST00000523800 1111 ntBASIC4.98□□□□□ -1.61
EBF3Q9H4W6 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.98□□□□□ -1.61
EBF3Q9H4W6 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC4.98□□□□□ -1.61
EBF3Q9H4W6 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
EBF3Q9H4W6 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC4.98□□□□□ -1.61
EBF3Q9H4W6 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.98□□□□□ -1.61
EBF3Q9H4W6 OR11H7-201ENST00000553765 945 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
EBF3Q9H4W6 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC4.98□□□□□ -1.61
EBF3Q9H4W6 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC4.98□□□□□ -1.61
EBF3Q9H4W6 AC025588.2-201ENST00000604851 466 ntBASIC4.98□□□□□ -1.61
EBF3Q9H4W6 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
EBF3Q9H4W6 AL035461.2-201ENST00000619201 524 ntBASIC4.98□□□□□ -1.61
EBF3Q9H4W6 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
EBF3Q9H4W6 AC092608.3-201ENST00000625017 386 ntBASIC4.98□□□□□ -1.61
EBF3Q9H4W6 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.98□□□□□ -1.61
EBF3Q9H4W6 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
EBF3Q9H4W6 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
EBF3Q9H4W6 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
EBF3Q9H4W6 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
EBF3Q9H4W6 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
EBF3Q9H4W6 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
EBF3Q9H4W6 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
EBF3Q9H4W6 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
EBF3Q9H4W6 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
EBF3Q9H4W6 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
EBF3Q9H4W6 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.98□□□□□ -1.61
EBF3Q9H4W6 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC4.97□□□□□ -1.61
EBF3Q9H4W6 AC089984.1-201ENST00000552780 1431 ntTSL 3 BASIC4.97□□□□□ -1.61
EBF3Q9H4W6 KARSP3-201ENST00000571212 1504 ntBASIC4.97□□□□□ -1.61
EBF3Q9H4W6 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.97□□□□□ -1.61
EBF3Q9H4W6 AC008758.3-201ENST00000507003 1829 ntBASIC4.97□□□□□ -1.61
EBF3Q9H4W6 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
EBF3Q9H4W6 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.97□□□□□ -1.61
EBF3Q9H4W6 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
EBF3Q9H4W6 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC4.97□□□□□ -1.61
EBF3Q9H4W6 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
EBF3Q9H4W6 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.97□□□□□ -1.61
EBF3Q9H4W6 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.97□□□□□ -1.61
EBF3Q9H4W6 AL672167.1-205ENST00000641112 3080 ntBASIC4.97□□□□□ -1.61
EBF3Q9H4W6 A2MP1-204ENST00000566278 4130 ntBASIC4.97□□□□□ -1.61
EBF3Q9H4W6 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
EBF3Q9H4W6 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
EBF3Q9H4W6 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
EBF3Q9H4W6 RNU6-252P-201ENST00000363232 107 ntBASIC4.97□□□□□ -1.61
EBF3Q9H4W6 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
EBF3Q9H4W6 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
EBF3Q9H4W6 S100A9-201ENST00000368738 577 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
EBF3Q9H4W6 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
EBF3Q9H4W6 SNORA70F-201ENST00000384142 135 ntBASIC4.97□□□□□ -1.61
EBF3Q9H4W6 RNU2-22P-201ENST00000411266 212 ntBASIC4.97□□□□□ -1.61
EBF3Q9H4W6 AL158825.1-201ENST00000414735 521 ntBASIC4.97□□□□□ -1.61
EBF3Q9H4W6 BTF3P9-201ENST00000418784 283 ntBASIC4.97□□□□□ -1.61
EBF3Q9H4W6 EIF4A1P1-201ENST00000420241 934 ntBASIC4.97□□□□□ -1.61
EBF3Q9H4W6 AC021035.1-201ENST00000421597 427 ntTSL 3 BASIC4.97□□□□□ -1.61
EBF3Q9H4W6 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC4.97□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 133.1 ms