Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TRIM4Q9C037 SNORA71.3-201ENST00000362582 128 ntBASIC4.32□□□□□ -1.72
TRIM4Q9C037 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
TRIM4Q9C037 SCP2-205ENST00000408941 1298 ntTSL 2 BASIC4.32□□□□□ -1.72
TRIM4Q9C037 AC011933.1-201ENST00000413334 321 ntBASIC4.32□□□□□ -1.72
TRIM4Q9C037 MTCO1P54-201ENST00000430139 712 ntBASIC4.32□□□□□ -1.72
TRIM4Q9C037 RPL7AP52-201ENST00000458096 790 ntBASIC4.32□□□□□ -1.72
TRIM4Q9C037 AC116533.1-201ENST00000459748 321 ntBASIC4.32□□□□□ -1.72
TRIM4Q9C037 AC098583.1-201ENST00000480875 255 ntBASIC4.32□□□□□ -1.72
TRIM4Q9C037 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC4.32□□□□□ -1.72
TRIM4Q9C037 LINC02201-203ENST00000514657 674 ntTSL 3 BASIC4.32□□□□□ -1.72
TRIM4Q9C037 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TRIM4Q9C037 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC4.32□□□□□ -1.72
TRIM4Q9C037 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC4.32□□□□□ -1.72
TRIM4Q9C037 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC4.32□□□□□ -1.72
TRIM4Q9C037 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC4.32□□□□□ -1.72
TRIM4Q9C037 HNRNPCP4-201ENST00000571636 900 ntBASIC4.32□□□□□ -1.72
TRIM4Q9C037 AC244505.7-201ENST00000599675 272 ntBASIC4.32□□□□□ -1.72
TRIM4Q9C037 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC4.32□□□□□ -1.72
TRIM4Q9C037 AC012603.1-201ENST00000606424 528 ntBASIC4.32□□□□□ -1.72
TRIM4Q9C037 AP005019.3-201ENST00000620418 560 ntBASIC4.32□□□□□ -1.72
TRIM4Q9C037 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC4.32□□□□□ -1.72
TRIM4Q9C037 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
TRIM4Q9C037 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC4.32□□□□□ -1.72
TRIM4Q9C037 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
TRIM4Q9C037 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TRIM4Q9C037 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
TRIM4Q9C037 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TRIM4Q9C037 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TRIM4Q9C037 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
TRIM4Q9C037 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
TRIM4Q9C037 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC4.31□□□□□ -1.72
TRIM4Q9C037 AC021146.4-201ENST00000309229 279 ntBASIC4.31□□□□□ -1.72
TRIM4Q9C037 AC007685.1-201ENST00000329806 452 ntBASIC4.31□□□□□ -1.72
TRIM4Q9C037 MIR423-201ENST00000362201 94 ntBASIC4.31□□□□□ -1.72
TRIM4Q9C037 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC4.31□□□□□ -1.72
TRIM4Q9C037 CARD16-201ENST00000375704 613 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
TRIM4Q9C037 RNU6-1320P-201ENST00000390838 107 ntBASIC4.31□□□□□ -1.72
TRIM4Q9C037 RNU6-1269P-201ENST00000391139 107 ntBASIC4.31□□□□□ -1.72
TRIM4Q9C037 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC4.31□□□□□ -1.72
TRIM4Q9C037 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TRIM4Q9C037 RPL7P2-201ENST00000427639 268 ntBASIC4.31□□□□□ -1.72
TRIM4Q9C037 RPS3AP54-201ENST00000435535 734 ntBASIC4.31□□□□□ -1.72
TRIM4Q9C037 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC4.31□□□□□ -1.72
TRIM4Q9C037 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.31□□□□□ -1.72
TRIM4Q9C037 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC4.31□□□□□ -1.72
TRIM4Q9C037 RNU6-599P-201ENST00000459383 107 ntBASIC4.31□□□□□ -1.72
TRIM4Q9C037 RNU6-1193P-201ENST00000459461 107 ntBASIC4.31□□□□□ -1.72
TRIM4Q9C037 NIPA2P2-201ENST00000496376 1083 ntBASIC4.31□□□□□ -1.72
TRIM4Q9C037 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC4.31□□□□□ -1.72
TRIM4Q9C037 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.31□□□□□ -1.72
TRIM4Q9C037 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.31□□□□□ -1.72
TRIM4Q9C037 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.31□□□□□ -1.72
TRIM4Q9C037 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.31□□□□□ -1.72
TRIM4Q9C037 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC4.31□□□□□ -1.72
TRIM4Q9C037 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC4.31□□□□□ -1.72
TRIM4Q9C037 IGHV4OR15-8-201ENST00000557788 353 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
TRIM4Q9C037 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.31□□□□□ -1.72
TRIM4Q9C037 MIR4298-201ENST00000584380 73 ntBASIC4.31□□□□□ -1.72
TRIM4Q9C037 AC010201.1-201ENST00000605051 540 ntBASIC4.31□□□□□ -1.72
TRIM4Q9C037 OR7A19P-201ENST00000608051 733 ntBASIC4.31□□□□□ -1.72
TRIM4Q9C037 AC012409.3-201ENST00000611343 981 ntBASIC4.31□□□□□ -1.72
TRIM4Q9C037 AL133243.1-201ENST00000614487 366 ntBASIC4.31□□□□□ -1.72
TRIM4Q9C037 RNU6-368P-201ENST00000620928 107 ntBASIC4.31□□□□□ -1.72
TRIM4Q9C037 RNU6-538P-201ENST00000622329 107 ntBASIC4.31□□□□□ -1.72
TRIM4Q9C037 AC135068.2-201ENST00000622410 353 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
TRIM4Q9C037 AC006971.1-201ENST00000407916 4486 ntBASIC4.31□□□□□ -1.72
TRIM4Q9C037 SLITRK5-201ENST00000325089 21103 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TRIM4Q9C037 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
TRIM4Q9C037 LINC00901-201ENST00000487512 1452 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
TRIM4Q9C037 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC4.3□□□□□ -1.72
TRIM4Q9C037 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
TRIM4Q9C037 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
TRIM4Q9C037 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
TRIM4Q9C037 C1orf100-201ENST00000308105 579 ntAPPRIS P1 TSL 2 BASIC4.3□□□□□ -1.72
TRIM4Q9C037 MIR659-201ENST00000384963 97 ntBASIC4.3□□□□□ -1.72
TRIM4Q9C037 Z98941.1-201ENST00000407764 100 ntBASIC4.3□□□□□ -1.72
TRIM4Q9C037 CYCSP19-201ENST00000411715 316 ntBASIC4.3□□□□□ -1.72
TRIM4Q9C037 IFNAR2-206ENST00000413881 710 ntTSL 5 BASIC4.3□□□□□ -1.72
TRIM4Q9C037 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC4.3□□□□□ -1.72
TRIM4Q9C037 UBTFL3-201ENST00000418934 1024 ntBASIC4.3□□□□□ -1.72
TRIM4Q9C037 FTH1P16-201ENST00000435241 552 ntBASIC4.3□□□□□ -1.72
TRIM4Q9C037 NUDT7-202ENST00000437314 930 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
TRIM4Q9C037 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
TRIM4Q9C037 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
TRIM4Q9C037 RPS7P7-201ENST00000463499 571 ntBASIC4.3□□□□□ -1.72
TRIM4Q9C037 UBTFL6-201ENST00000477929 1024 ntBASIC4.3□□□□□ -1.72
TRIM4Q9C037 AC098799.3-201ENST00000506095 438 ntBASIC4.3□□□□□ -1.72
TRIM4Q9C037 USP9YP5-201ENST00000511770 630 ntBASIC4.3□□□□□ -1.72
TRIM4Q9C037 AC026726.1-201ENST00000512859 601 ntBASIC4.3□□□□□ -1.72
TRIM4Q9C037 RN7SKP5-201ENST00000517045 272 ntBASIC4.3□□□□□ -1.72
TRIM4Q9C037 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC4.3□□□□□ -1.72
TRIM4Q9C037 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
TRIM4Q9C037 AC124068.1-201ENST00000563131 678 ntBASIC4.3□□□□□ -1.72
TRIM4Q9C037 AC010547.7-201ENST00000570323 333 ntBASIC4.3□□□□□ -1.72
TRIM4Q9C037 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC4.3□□□□□ -1.72
TRIM4Q9C037 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC4.3□□□□□ -1.72
TRIM4Q9C037 SMCR2_2.1-201ENST00000619783 161 ntBASIC4.3□□□□□ -1.72
TRIM4Q9C037 AP003400.2-201ENST00000624036 666 ntBASIC4.3□□□□□ -1.72
TRIM4Q9C037 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms