Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC3.68□□□□□ -1.82
CCDC71LQ8N9Z2 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC3.68□□□□□ -1.82
CCDC71LQ8N9Z2 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC3.68□□□□□ -1.82
CCDC71LQ8N9Z2 AC011477.5-201ENST00000586571 259 ntBASIC3.68□□□□□ -1.82
CCDC71LQ8N9Z2 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC3.68□□□□□ -1.82
CCDC71LQ8N9Z2 AC005255.1-201ENST00000593748 216 ntBASIC3.68□□□□□ -1.82
CCDC71LQ8N9Z2 KATNBL1P5-201ENST00000605015 517 ntBASIC3.68□□□□□ -1.82
CCDC71LQ8N9Z2 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
CCDC71LQ8N9Z2 AC019278.1-201ENST00000623516 479 ntBASIC3.68□□□□□ -1.82
CCDC71LQ8N9Z2 AC112694.2-201ENST00000623697 768 ntBASIC3.68□□□□□ -1.82
CCDC71LQ8N9Z2 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC71LQ8N9Z2 GMNC-201ENST00000442080 3422 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
CCDC71LQ8N9Z2 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC71LQ8N9Z2 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC71LQ8N9Z2 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
CCDC71LQ8N9Z2 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.67□□□□□ -1.82
CCDC71LQ8N9Z2 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC3.67□□□□□ -1.82
CCDC71LQ8N9Z2 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC71LQ8N9Z2 RNF6P1-201ENST00000444889 1784 ntBASIC3.67□□□□□ -1.82
CCDC71LQ8N9Z2 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC71LQ8N9Z2 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.67□□□□□ -1.82
CCDC71LQ8N9Z2 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC71LQ8N9Z2 RNU6-317P-201ENST00000384031 107 ntBASIC3.67□□□□□ -1.82
CCDC71LQ8N9Z2 MIR323B-201ENST00000385269 82 ntBASIC3.67□□□□□ -1.82
CCDC71LQ8N9Z2 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC71LQ8N9Z2 MIR1911-201ENST00000410783 80 ntBASIC3.67□□□□□ -1.82
CCDC71LQ8N9Z2 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC71LQ8N9Z2 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC71LQ8N9Z2 AC092832.1-201ENST00000422934 400 ntBASIC3.67□□□□□ -1.82
CCDC71LQ8N9Z2 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC3.67□□□□□ -1.82
CCDC71LQ8N9Z2 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.67□□□□□ -1.82
CCDC71LQ8N9Z2 PSMD10P3-201ENST00000437000 448 ntBASIC3.67□□□□□ -1.82
CCDC71LQ8N9Z2 AP000949.1-201ENST00000438328 629 ntBASIC3.67□□□□□ -1.82
CCDC71LQ8N9Z2 ELOCP8-201ENST00000439309 332 ntBASIC3.67□□□□□ -1.82
CCDC71LQ8N9Z2 ELOCP15-201ENST00000442090 332 ntBASIC3.67□□□□□ -1.82
CCDC71LQ8N9Z2 RPL23AP23-201ENST00000452590 471 ntBASIC3.67□□□□□ -1.82
CCDC71LQ8N9Z2 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC3.67□□□□□ -1.82
CCDC71LQ8N9Z2 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC3.67□□□□□ -1.82
CCDC71LQ8N9Z2 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC3.67□□□□□ -1.82
CCDC71LQ8N9Z2 AC018635.1-201ENST00000468292 1030 ntBASIC3.67□□□□□ -1.82
CCDC71LQ8N9Z2 OR52A4P-201ENST00000472867 958 ntBASIC3.67□□□□□ -1.82
CCDC71LQ8N9Z2 AC087385.1-201ENST00000475062 312 ntBASIC3.67□□□□□ -1.82
CCDC71LQ8N9Z2 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.67□□□□□ -1.82
CCDC71LQ8N9Z2 UBA52P7-201ENST00000486088 380 ntBASIC3.67□□□□□ -1.82
CCDC71LQ8N9Z2 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC71LQ8N9Z2 AC012170.1-201ENST00000495139 359 ntBASIC3.67□□□□□ -1.82
CCDC71LQ8N9Z2 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC71LQ8N9Z2 AC093864.1-201ENST00000504555 745 ntTSL 5 BASIC3.67□□□□□ -1.82
CCDC71LQ8N9Z2 AC007016.1-201ENST00000512110 244 ntBASIC3.67□□□□□ -1.82
CCDC71LQ8N9Z2 RNA5SP309-201ENST00000516670 106 ntBASIC3.67□□□□□ -1.82
CCDC71LQ8N9Z2 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC3.67□□□□□ -1.82
CCDC71LQ8N9Z2 AC008632.1-202ENST00000518605 452 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC71LQ8N9Z2 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC71LQ8N9Z2 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC71LQ8N9Z2 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC3.67□□□□□ -1.82
CCDC71LQ8N9Z2 AC112693.1-201ENST00000555297 682 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC71LQ8N9Z2 AL161804.1-201ENST00000555600 708 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC71LQ8N9Z2 AC025918.2-201ENST00000558683 763 ntBASIC3.67□□□□□ -1.82
CCDC71LQ8N9Z2 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC3.67□□□□□ -1.82
CCDC71LQ8N9Z2 ZNF92P3-201ENST00000596594 954 ntBASIC3.67□□□□□ -1.82
CCDC71LQ8N9Z2 AP003117.1-201ENST00000602771 554 ntBASIC3.67□□□□□ -1.82
CCDC71LQ8N9Z2 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC71LQ8N9Z2 AL139395.1-201ENST00000603662 160 ntBASIC3.67□□□□□ -1.82
CCDC71LQ8N9Z2 MIR432-201ENST00000606207 94 ntBASIC3.67□□□□□ -1.82
CCDC71LQ8N9Z2 AL445493.3-201ENST00000619568 477 ntBASIC3.67□□□□□ -1.82
CCDC71LQ8N9Z2 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC3.67□□□□□ -1.82
CCDC71LQ8N9Z2 FRG1DP-201ENST00000635586 771 ntBASIC3.67□□□□□ -1.82
CCDC71LQ8N9Z2 LINC01808-202ENST00000641680 1116 ntBASIC3.67□□□□□ -1.82
CCDC71LQ8N9Z2 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.67□□□□□ -1.82
CCDC71LQ8N9Z2 GTF2H2B-203ENST00000508065 1432 ntBASIC3.67□□□□□ -1.82
CCDC71LQ8N9Z2 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC71LQ8N9Z2 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC71LQ8N9Z2 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC71LQ8N9Z2 PUS7L-207ENST00000551923 3313 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC71LQ8N9Z2 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
CCDC71LQ8N9Z2 AL031985.3-201ENST00000565390 2449 ntBASIC3.66□□□□□ -1.82
CCDC71LQ8N9Z2 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC71LQ8N9Z2 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC3.66□□□□□ -1.82
CCDC71LQ8N9Z2 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.66□□□□□ -1.82
CCDC71LQ8N9Z2 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC71LQ8N9Z2 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC71LQ8N9Z2 RNU4-4P-201ENST00000364588 130 ntBASIC3.66□□□□□ -1.82
CCDC71LQ8N9Z2 MIR124-3-201ENST00000384866 87 ntBASIC3.66□□□□□ -1.82
CCDC71LQ8N9Z2 PTGES3P2-201ENST00000407942 482 ntBASIC3.66□□□□□ -1.82
CCDC71LQ8N9Z2 BCL11A-205ENST00000409351 756 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC71LQ8N9Z2 RPS20P14-201ENST00000412545 360 ntBASIC3.66□□□□□ -1.82
CCDC71LQ8N9Z2 AL121882.1-201ENST00000422893 417 ntBASIC3.66□□□□□ -1.82
CCDC71LQ8N9Z2 EIF2S2P3-201ENST00000428356 999 ntBASIC3.66□□□□□ -1.82
CCDC71LQ8N9Z2 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.66□□□□□ -1.82
CCDC71LQ8N9Z2 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC3.66□□□□□ -1.82
CCDC71LQ8N9Z2 AC073850.1-201ENST00000449243 255 ntBASIC3.66□□□□□ -1.82
CCDC71LQ8N9Z2 AL451050.1-201ENST00000450126 415 ntBASIC3.66□□□□□ -1.82
CCDC71LQ8N9Z2 OR52J1P-201ENST00000450596 932 ntBASIC3.66□□□□□ -1.82
CCDC71LQ8N9Z2 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.66□□□□□ -1.82
CCDC71LQ8N9Z2 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.66□□□□□ -1.82
CCDC71LQ8N9Z2 RN7SL585P-201ENST00000470538 280 ntBASIC3.66□□□□□ -1.82
CCDC71LQ8N9Z2 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC3.66□□□□□ -1.82
CCDC71LQ8N9Z2 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC3.66□□□□□ -1.82
CCDC71LQ8N9Z2 SNORA70.14-201ENST00000516205 110 ntBASIC3.66□□□□□ -1.82
CCDC71LQ8N9Z2 MAL2-205ENST00000521048 575 ntTSL 4 BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms