Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
TTC9CQ8N5M4 EMCN-201ENST00000296420 4037 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
TTC9CQ8N5M4 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
TTC9CQ8N5M4 AC066616.2-201ENST00000559334 1481 ntBASIC3.24□□□□□ -1.89
TTC9CQ8N5M4 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC3.24□□□□□ -1.89
TTC9CQ8N5M4 SNORA60-201ENST00000362396 134 ntBASIC3.24□□□□□ -1.89
TTC9CQ8N5M4 ARV1-202ENST00000366658 1170 ntTSL 5 BASIC3.24□□□□□ -1.89
TTC9CQ8N5M4 RNU1-89P-201ENST00000384592 164 ntBASIC3.24□□□□□ -1.89
TTC9CQ8N5M4 Z98941.1-201ENST00000407764 100 ntBASIC3.24□□□□□ -1.89
TTC9CQ8N5M4 SLC4A1APP1-201ENST00000419995 602 ntBASIC3.24□□□□□ -1.89
TTC9CQ8N5M4 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC3.24□□□□□ -1.89
TTC9CQ8N5M4 RPL18P10-201ENST00000425606 538 ntBASIC3.24□□□□□ -1.89
TTC9CQ8N5M4 AC017083.1-201ENST00000428093 483 ntBASIC3.24□□□□□ -1.89
TTC9CQ8N5M4 AL365396.1-201ENST00000430854 671 ntBASIC3.24□□□□□ -1.89
TTC9CQ8N5M4 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.24□□□□□ -1.89
TTC9CQ8N5M4 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.24□□□□□ -1.89
TTC9CQ8N5M4 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.24□□□□□ -1.89
TTC9CQ8N5M4 AC006011.1-201ENST00000442758 349 ntBASIC3.24□□□□□ -1.89
TTC9CQ8N5M4 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC3.24□□□□□ -1.89
TTC9CQ8N5M4 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.24□□□□□ -1.89
TTC9CQ8N5M4 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
TTC9CQ8N5M4 AC006463.2-201ENST00000473326 348 ntBASIC3.24□□□□□ -1.89
TTC9CQ8N5M4 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
TTC9CQ8N5M4 METTL15P1-201ENST00000481421 1045 ntBASIC3.24□□□□□ -1.89
TTC9CQ8N5M4 RPL29P14-201ENST00000495837 428 ntBASIC3.24□□□□□ -1.89
TTC9CQ8N5M4 AC025554.1-201ENST00000505641 188 ntBASIC3.24□□□□□ -1.89
TTC9CQ8N5M4 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.24□□□□□ -1.89
TTC9CQ8N5M4 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.24□□□□□ -1.89
TTC9CQ8N5M4 AC093824.1-201ENST00000508796 343 ntBASIC3.24□□□□□ -1.89
TTC9CQ8N5M4 RNU7-143P-201ENST00000516781 65 ntBASIC3.24□□□□□ -1.89
TTC9CQ8N5M4 IGKV2-38-201ENST00000517443 247 ntBASIC3.24□□□□□ -1.89
TTC9CQ8N5M4 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.24□□□□□ -1.89
TTC9CQ8N5M4 AC103853.1-201ENST00000520588 649 ntTSL 5 BASIC3.24□□□□□ -1.89
TTC9CQ8N5M4 GYPA-211ENST00000535709 695 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
TTC9CQ8N5M4 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
TTC9CQ8N5M4 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.24□□□□□ -1.89
TTC9CQ8N5M4 RPL23AP87-202ENST00000573039 466 ntBASIC3.24□□□□□ -1.89
TTC9CQ8N5M4 AC006116.5-201ENST00000591936 559 ntBASIC3.24□□□□□ -1.89
TTC9CQ8N5M4 AL034351.1-201ENST00000605288 668 ntBASIC3.24□□□□□ -1.89
TTC9CQ8N5M4 AC090246.1-201ENST00000616499 426 ntBASIC3.24□□□□□ -1.89
TTC9CQ8N5M4 HMGN2-210ENST00000619352 1148 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
TTC9CQ8N5M4 PCBP1-AS1-307ENST00000627050 912 ntTSL 5 BASIC3.24□□□□□ -1.89
TTC9CQ8N5M4 IPO5-229ENST00000631030 192 ntTSL 5 BASIC3.24□□□□□ -1.89
TTC9CQ8N5M4 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC3.24□□□□□ -1.89
TTC9CQ8N5M4 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.24□□□□□ -1.89
TTC9CQ8N5M4 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
TTC9CQ8N5M4 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
TTC9CQ8N5M4 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.24□□□□□ -1.89
TTC9CQ8N5M4 NR1H5P-201ENST00000452683 1377 ntBASIC3.24□□□□□ -1.89
TTC9CQ8N5M4 LARP1BP1-201ENST00000506036 1359 ntBASIC3.24□□□□□ -1.89
TTC9CQ8N5M4 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
TTC9CQ8N5M4 ETV1-202ENST00000399357 6096 ntTSL 2 BASIC3.23□□□□□ -1.89
TTC9CQ8N5M4 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
TTC9CQ8N5M4 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
TTC9CQ8N5M4 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.23□□□□□ -1.89
TTC9CQ8N5M4 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
TTC9CQ8N5M4 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.23□□□□□ -1.89
TTC9CQ8N5M4 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
TTC9CQ8N5M4 HNMT-201ENST00000280096 504 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
TTC9CQ8N5M4 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
TTC9CQ8N5M4 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
TTC9CQ8N5M4 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC3.23□□□□□ -1.89
TTC9CQ8N5M4 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC3.23□□□□□ -1.89
TTC9CQ8N5M4 AL590006.1-201ENST00000417390 752 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
TTC9CQ8N5M4 RPL23AP38-201ENST00000423801 469 ntBASIC3.23□□□□□ -1.89
TTC9CQ8N5M4 LINC01745-201ENST00000430921 372 ntTSL 5 BASIC3.23□□□□□ -1.89
TTC9CQ8N5M4 LINC01826-201ENST00000432894 584 ntTSL 4 BASIC3.23□□□□□ -1.89
TTC9CQ8N5M4 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC3.23□□□□□ -1.89
TTC9CQ8N5M4 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC3.23□□□□□ -1.89
TTC9CQ8N5M4 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.23□□□□□ -1.89
TTC9CQ8N5M4 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.23□□□□□ -1.89
TTC9CQ8N5M4 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.23□□□□□ -1.89
TTC9CQ8N5M4 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.23□□□□□ -1.89
TTC9CQ8N5M4 RN7SL481P-201ENST00000477764 299 ntBASIC3.23□□□□□ -1.89
TTC9CQ8N5M4 AC105137.1-201ENST00000484355 562 ntBASIC3.23□□□□□ -1.89
TTC9CQ8N5M4 RPS27AP13-201ENST00000498403 237 ntBASIC3.23□□□□□ -1.89
TTC9CQ8N5M4 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC3.23□□□□□ -1.89
TTC9CQ8N5M4 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
TTC9CQ8N5M4 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC3.23□□□□□ -1.89
TTC9CQ8N5M4 RN7SKP34-201ENST00000516142 244 ntBASIC3.23□□□□□ -1.89
TTC9CQ8N5M4 RAB9BP1-201ENST00000519581 626 ntBASIC3.23□□□□□ -1.89
TTC9CQ8N5M4 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC3.23□□□□□ -1.89
TTC9CQ8N5M4 AP003730.1-201ENST00000524605 285 ntBASIC3.23□□□□□ -1.89
TTC9CQ8N5M4 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC3.23□□□□□ -1.89
TTC9CQ8N5M4 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.23□□□□□ -1.89
TTC9CQ8N5M4 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC3.23□□□□□ -1.89
TTC9CQ8N5M4 AC007599.1-201ENST00000568688 1174 ntBASIC3.23□□□□□ -1.89
TTC9CQ8N5M4 AC079171.1-201ENST00000568788 914 ntBASIC3.23□□□□□ -1.89
TTC9CQ8N5M4 MIR3138-201ENST00000585238 82 ntBASIC3.23□□□□□ -1.89
TTC9CQ8N5M4 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC3.23□□□□□ -1.89
TTC9CQ8N5M4 AL713922.2-201ENST00000619384 716 ntBASIC3.23□□□□□ -1.89
TTC9CQ8N5M4 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
TTC9CQ8N5M4 FTO-203ENST00000460382 1517 ntTSL 5 BASIC3.23□□□□□ -1.89
TTC9CQ8N5M4 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC3.23□□□□□ -1.89
TTC9CQ8N5M4 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC3.23□□□□□ -1.89
TTC9CQ8N5M4 AC005261.4-201ENST00000600047 1385 ntBASIC3.23□□□□□ -1.89
TTC9CQ8N5M4 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC3.23□□□□□ -1.89
TTC9CQ8N5M4 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.23□□□□□ -1.89
TTC9CQ8N5M4 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC3.22□□□□□ -1.89
TTC9CQ8N5M4 AP000756.2-201ENST00000624168 2567 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 116.2 ms