Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AC090589.1-201ENST00000473109 362 ntBASIC5.94□□□□□ -1.46
VPS8Q8N3P4 ACTR3P3-201ENST00000480448 893 ntBASIC5.94□□□□□ -1.46
VPS8Q8N3P4 AC026726.1-201ENST00000512859 601 ntBASIC5.94□□□□□ -1.46
VPS8Q8N3P4 MTND4LP31-201ENST00000514859 294 ntBASIC5.94□□□□□ -1.46
VPS8Q8N3P4 RNU4ATAC6P-201ENST00000516592 126 ntBASIC5.94□□□□□ -1.46
VPS8Q8N3P4 AC023632.4-201ENST00000517783 191 ntBASIC5.94□□□□□ -1.46
VPS8Q8N3P4 TMEM68-206ENST00000519784 1009 ntTSL 3 BASIC5.94□□□□□ -1.46
VPS8Q8N3P4 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC5.94□□□□□ -1.46
VPS8Q8N3P4 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC5.94□□□□□ -1.46
VPS8Q8N3P4 OR7E13P-201ENST00000526052 910 ntBASIC5.94□□□□□ -1.46
VPS8Q8N3P4 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
VPS8Q8N3P4 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC5.94□□□□□ -1.46
VPS8Q8N3P4 AC020978.9-201ENST00000624380 1141 ntBASIC5.94□□□□□ -1.46
VPS8Q8N3P4 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
VPS8Q8N3P4 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
VPS8Q8N3P4 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
VPS8Q8N3P4 SCN1A-220ENST00000641603 12506 ntBASIC5.94□□□□□ -1.46
VPS8Q8N3P4 DCUN1D1-208ENST00000632685 3147 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
VPS8Q8N3P4 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
VPS8Q8N3P4 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC5.93□□□□□ -1.46
VPS8Q8N3P4 ZNF285B-201ENST00000561698 1767 ntBASIC5.93□□□□□ -1.46
VPS8Q8N3P4 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC5.93□□□□□ -1.46
VPS8Q8N3P4 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
VPS8Q8N3P4 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.93□□□□□ -1.46
VPS8Q8N3P4 SNORA73.2-201ENST00000364946 201 ntBASIC5.93□□□□□ -1.46
VPS8Q8N3P4 PTGFR-203ENST00000370758 4337 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
VPS8Q8N3P4 RPL21P17-201ENST00000397467 475 ntBASIC5.93□□□□□ -1.46
VPS8Q8N3P4 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC5.93□□□□□ -1.46
VPS8Q8N3P4 ATP5A1P2-201ENST00000412323 255 ntBASIC5.93□□□□□ -1.46
VPS8Q8N3P4 RAB9AP3-201ENST00000412737 573 ntBASIC5.93□□□□□ -1.46
VPS8Q8N3P4 JKAMPP1-201ENST00000413804 919 ntBASIC5.93□□□□□ -1.46
VPS8Q8N3P4 SYF2P2-201ENST00000417620 583 ntBASIC5.93□□□□□ -1.46
VPS8Q8N3P4 AL157884.3-201ENST00000448273 1184 ntBASIC5.93□□□□□ -1.46
VPS8Q8N3P4 RAB9AP1-201ENST00000449393 573 ntBASIC5.93□□□□□ -1.46
VPS8Q8N3P4 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC5.93□□□□□ -1.46
VPS8Q8N3P4 AC109458.1-201ENST00000508858 316 ntBASIC5.93□□□□□ -1.46
VPS8Q8N3P4 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
VPS8Q8N3P4 AC053481.3-201ENST00000577881 843 ntBASIC5.93□□□□□ -1.46
VPS8Q8N3P4 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC5.93□□□□□ -1.46
VPS8Q8N3P4 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC5.93□□□□□ -1.46
VPS8Q8N3P4 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC5.93□□□□□ -1.46
VPS8Q8N3P4 AL354760.1-201ENST00000608357 643 ntBASIC5.93□□□□□ -1.46
VPS8Q8N3P4 AL157762.1-201ENST00000619612 415 ntBASIC5.93□□□□□ -1.46
VPS8Q8N3P4 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
VPS8Q8N3P4 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
VPS8Q8N3P4 LINC02426-201ENST00000550506 1372 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
VPS8Q8N3P4 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
VPS8Q8N3P4 ATP5F1P3-201ENST00000397213 657 ntBASIC5.92□□□□□ -1.46
VPS8Q8N3P4 MTND2P15-201ENST00000418575 892 ntBASIC5.92□□□□□ -1.46
VPS8Q8N3P4 AC092647.1-201ENST00000420654 287 ntBASIC5.92□□□□□ -1.46
VPS8Q8N3P4 ATP5HP2-201ENST00000433885 485 ntBASIC5.92□□□□□ -1.46
VPS8Q8N3P4 AC005304.1-201ENST00000457609 405 ntTSL 3 BASIC5.92□□□□□ -1.46
VPS8Q8N3P4 AC018635.1-201ENST00000468292 1030 ntBASIC5.92□□□□□ -1.46
VPS8Q8N3P4 RPL5P16-201ENST00000471467 790 ntBASIC5.92□□□□□ -1.46
VPS8Q8N3P4 AC098587.1-201ENST00000508241 540 ntTSL 4 BASIC5.92□□□□□ -1.46
VPS8Q8N3P4 NAT2-202ENST00000520116 716 ntTSL 3 BASIC5.92□□□□□ -1.46
VPS8Q8N3P4 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC5.92□□□□□ -1.46
VPS8Q8N3P4 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC5.92□□□□□ -1.46
VPS8Q8N3P4 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC5.92□□□□□ -1.46
VPS8Q8N3P4 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
VPS8Q8N3P4 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
VPS8Q8N3P4 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC5.92□□□□□ -1.46
VPS8Q8N3P4 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
VPS8Q8N3P4 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
VPS8Q8N3P4 SNORA71.3-201ENST00000362582 128 ntBASIC5.91□□□□□ -1.46
VPS8Q8N3P4 RNA5SP51-201ENST00000364750 119 ntBASIC5.91□□□□□ -1.46
VPS8Q8N3P4 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC5.91□□□□□ -1.46
VPS8Q8N3P4 RNA5SP44-201ENST00000410446 133 ntBASIC5.91□□□□□ -1.46
VPS8Q8N3P4 GNG5P5-201ENST00000420444 220 ntBASIC5.91□□□□□ -1.46
VPS8Q8N3P4 IGKV1OR9-2-201ENST00000431378 277 ntBASIC5.91□□□□□ -1.46
VPS8Q8N3P4 SETD6P1-201ENST00000444575 317 ntBASIC5.91□□□□□ -1.46
VPS8Q8N3P4 YWHAQP9-201ENST00000445891 512 ntBASIC5.91□□□□□ -1.46
VPS8Q8N3P4 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC5.91□□□□□ -1.46
VPS8Q8N3P4 NDUFB4P12-201ENST00000513465 390 ntBASIC5.91□□□□□ -1.46
VPS8Q8N3P4 MYL12AP1-201ENST00000518490 515 ntBASIC5.91□□□□□ -1.46
VPS8Q8N3P4 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC5.91□□□□□ -1.46
VPS8Q8N3P4 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC5.91□□□□□ -1.46
VPS8Q8N3P4 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
VPS8Q8N3P4 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC5.91□□□□□ -1.46
VPS8Q8N3P4 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC5.91□□□□□ -1.46
VPS8Q8N3P4 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.91□□□□□ -1.46
VPS8Q8N3P4 AL356274.2-201ENST00000624379 3752 ntBASIC5.91□□□□□ -1.46
VPS8Q8N3P4 AC090220.1-201ENST00000593078 1699 ntBASIC5.91□□□□□ -1.46
VPS8Q8N3P4 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
VPS8Q8N3P4 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC5.91□□□□□ -1.46
VPS8Q8N3P4 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC5.91□□□□□ -1.46
VPS8Q8N3P4 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
VPS8Q8N3P4 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC5.91□□□□□ -1.46
VPS8Q8N3P4 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
VPS8Q8N3P4 SNORD3H-201ENST00000384486 214 ntBASIC5.91□□□□□ -1.46
VPS8Q8N3P4 RNA5SP39-201ENST00000411245 120 ntBASIC5.91□□□□□ -1.46
VPS8Q8N3P4 AL160275.2-201ENST00000412010 394 ntBASIC5.91□□□□□ -1.46
VPS8Q8N3P4 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC5.91□□□□□ -1.46
VPS8Q8N3P4 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC5.91□□□□□ -1.46
VPS8Q8N3P4 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC5.91□□□□□ -1.46
VPS8Q8N3P4 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC5.91□□□□□ -1.46
VPS8Q8N3P4 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC5.91□□□□□ -1.46
VPS8Q8N3P4 AP005901.4-201ENST00000577336 569 ntBASIC5.91□□□□□ -1.46
VPS8Q8N3P4 CCDC58P3-201ENST00000590792 430 ntBASIC5.91□□□□□ -1.46
VPS8Q8N3P4 BNIP3P33-201ENST00000598912 569 ntBASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms