Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 SLC25A18P1-201ENST00000449385 454 ntBASIC3.11□□□□□ -1.91
MRPL55Q7Z7F7 AC233982.1-201ENST00000451247 436 ntBASIC3.11□□□□□ -1.91
MRPL55Q7Z7F7 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC3.11□□□□□ -1.91
MRPL55Q7Z7F7 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC3.11□□□□□ -1.91
MRPL55Q7Z7F7 RNU6ATAC28P-201ENST00000459249 118 ntBASIC3.11□□□□□ -1.91
MRPL55Q7Z7F7 AC089999.1-201ENST00000460336 374 ntBASIC3.11□□□□□ -1.91
MRPL55Q7Z7F7 RN7SL319P-201ENST00000480656 221 ntBASIC3.11□□□□□ -1.91
MRPL55Q7Z7F7 RPS27P23-201ENST00000487608 251 ntBASIC3.11□□□□□ -1.91
MRPL55Q7Z7F7 NIPA2P2-201ENST00000496376 1083 ntBASIC3.11□□□□□ -1.91
MRPL55Q7Z7F7 AC078918.1-201ENST00000498515 228 ntBASIC3.11□□□□□ -1.91
MRPL55Q7Z7F7 SNRPCP2-201ENST00000504370 475 ntBASIC3.11□□□□□ -1.91
MRPL55Q7Z7F7 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
MRPL55Q7Z7F7 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.11□□□□□ -1.91
MRPL55Q7Z7F7 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC3.11□□□□□ -1.91
MRPL55Q7Z7F7 AC010468.3-201ENST00000508225 458 ntBASIC3.11□□□□□ -1.91
MRPL55Q7Z7F7 AC106872.4-201ENST00000510050 523 ntBASIC3.11□□□□□ -1.91
MRPL55Q7Z7F7 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC3.11□□□□□ -1.91
MRPL55Q7Z7F7 AC026688.1-201ENST00000520639 1168 ntBASIC3.11□□□□□ -1.91
MRPL55Q7Z7F7 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC3.11□□□□□ -1.91
MRPL55Q7Z7F7 IGKV3D-34-201ENST00000522638 302 ntBASIC3.11□□□□□ -1.91
MRPL55Q7Z7F7 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.11□□□□□ -1.91
MRPL55Q7Z7F7 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC3.11□□□□□ -1.91
MRPL55Q7Z7F7 AC079917.1-201ENST00000527828 584 ntTSL 3 BASIC3.11□□□□□ -1.91
MRPL55Q7Z7F7 AC022832.1-201ENST00000530718 645 ntBASIC3.11□□□□□ -1.91
MRPL55Q7Z7F7 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
MRPL55Q7Z7F7 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC3.11□□□□□ -1.91
MRPL55Q7Z7F7 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC3.11□□□□□ -1.91
MRPL55Q7Z7F7 LINC00557-201ENST00000563184 1279 ntBASIC3.11□□□□□ -1.91
MRPL55Q7Z7F7 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC3.11□□□□□ -1.91
MRPL55Q7Z7F7 AC012146.2-201ENST00000576545 416 ntBASIC3.11□□□□□ -1.91
MRPL55Q7Z7F7 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC3.11□□□□□ -1.91
MRPL55Q7Z7F7 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.11□□□□□ -1.91
MRPL55Q7Z7F7 AC091488.1-201ENST00000604239 660 ntBASIC3.11□□□□□ -1.91
MRPL55Q7Z7F7 AC021851.1-201ENST00000608537 1082 ntBASIC3.11□□□□□ -1.91
MRPL55Q7Z7F7 AP000864.1-201ENST00000609424 650 ntBASIC3.11□□□□□ -1.91
MRPL55Q7Z7F7 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC3.11□□□□□ -1.91
MRPL55Q7Z7F7 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC3.11□□□□□ -1.91
MRPL55Q7Z7F7 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC3.11□□□□□ -1.91
MRPL55Q7Z7F7 HPVC1-201ENST00000629899 1198 ntBASIC3.11□□□□□ -1.91
MRPL55Q7Z7F7 MARCH1-201ENST00000274056 5367 ntAPPRIS P1 TSL 4 BASIC3.11□□□□□ -1.91
MRPL55Q7Z7F7 AL133383.2-201ENST00000622958 2336 ntBASIC3.11□□□□□ -1.91
MRPL55Q7Z7F7 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
MRPL55Q7Z7F7 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
MRPL55Q7Z7F7 CSPP1-203ENST00000519668 3715 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
MRPL55Q7Z7F7 AL031985.3-201ENST00000565390 2449 ntBASIC3.11□□□□□ -1.91
MRPL55Q7Z7F7 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.11□□□□□ -1.91
MRPL55Q7Z7F7 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
MRPL55Q7Z7F7 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
MRPL55Q7Z7F7 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
MRPL55Q7Z7F7 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
MRPL55Q7Z7F7 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.1□□□□□ -1.91
MRPL55Q7Z7F7 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
MRPL55Q7Z7F7 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
MRPL55Q7Z7F7 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC3.1□□□□□ -1.91
MRPL55Q7Z7F7 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC3.1□□□□□ -1.91
MRPL55Q7Z7F7 STAP1-201ENST00000265404 1511 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
MRPL55Q7Z7F7 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
MRPL55Q7Z7F7 LINC02432-202ENST00000509161 2839 ntTSL 2 BASIC3.1□□□□□ -1.91
MRPL55Q7Z7F7 ARHGAP42-203ENST00000524892 5685 ntTSL 5 BASIC3.1□□□□□ -1.91
MRPL55Q7Z7F7 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
MRPL55Q7Z7F7 CLEC7A-202ENST00000304084 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
MRPL55Q7Z7F7 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
MRPL55Q7Z7F7 SNORD56.4-201ENST00000363883 71 ntBASIC3.1□□□□□ -1.91
MRPL55Q7Z7F7 SNORA51.12-201ENST00000384448 134 ntBASIC3.1□□□□□ -1.91
MRPL55Q7Z7F7 AL035419.1-201ENST00000397037 564 ntBASIC3.1□□□□□ -1.91
MRPL55Q7Z7F7 RPL23AP59-201ENST00000399415 461 ntBASIC3.1□□□□□ -1.91
MRPL55Q7Z7F7 DSTNP4-201ENST00000399472 474 ntBASIC3.1□□□□□ -1.91
MRPL55Q7Z7F7 ATP5F1P6-201ENST00000402768 767 ntBASIC3.1□□□□□ -1.91
MRPL55Q7Z7F7 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC3.1□□□□□ -1.91
MRPL55Q7Z7F7 RNU2-37P-201ENST00000410695 177 ntBASIC3.1□□□□□ -1.91
MRPL55Q7Z7F7 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC3.1□□□□□ -1.91
MRPL55Q7Z7F7 RPL21P108-201ENST00000413857 481 ntBASIC3.1□□□□□ -1.91
MRPL55Q7Z7F7 EIF4HP2-201ENST00000424380 563 ntBASIC3.1□□□□□ -1.91
MRPL55Q7Z7F7 AC005517.2-201ENST00000424673 553 ntBASIC3.1□□□□□ -1.91
MRPL55Q7Z7F7 PSMA2P3-201ENST00000429685 675 ntBASIC3.1□□□□□ -1.91
MRPL55Q7Z7F7 FSIP2-AS1-201ENST00000429929 440 ntTSL 3 BASIC3.1□□□□□ -1.91
MRPL55Q7Z7F7 RPL7P4-203ENST00000430239 730 ntBASIC3.1□□□□□ -1.91
MRPL55Q7Z7F7 UBE2V1P1-201ENST00000430836 445 ntBASIC3.1□□□□□ -1.91
MRPL55Q7Z7F7 YWHAEP5-201ENST00000431545 765 ntBASIC3.1□□□□□ -1.91
MRPL55Q7Z7F7 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC3.1□□□□□ -1.91
MRPL55Q7Z7F7 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC3.1□□□□□ -1.91
MRPL55Q7Z7F7 DAZAP2-204ENST00000439799 701 ntTSL 2 BASIC3.1□□□□□ -1.91
MRPL55Q7Z7F7 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC3.1□□□□□ -1.91
MRPL55Q7Z7F7 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3.1□□□□□ -1.91
MRPL55Q7Z7F7 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.1□□□□□ -1.91
MRPL55Q7Z7F7 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC3.1□□□□□ -1.91
MRPL55Q7Z7F7 NPM1P49-201ENST00000448027 714 ntBASIC3.1□□□□□ -1.91
MRPL55Q7Z7F7 AURKAPS1-201ENST00000451805 1212 ntBASIC3.1□□□□□ -1.91
MRPL55Q7Z7F7 AL137802.1-201ENST00000452795 327 ntTSL 5 BASIC3.1□□□□□ -1.91
MRPL55Q7Z7F7 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC3.1□□□□□ -1.91
MRPL55Q7Z7F7 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC3.1□□□□□ -1.91
MRPL55Q7Z7F7 APOA2-207ENST00000470459 416 ntTSL 5 BASIC3.1□□□□□ -1.91
MRPL55Q7Z7F7 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.1□□□□□ -1.91
MRPL55Q7Z7F7 AC117394.1-201ENST00000477323 567 ntBASIC3.1□□□□□ -1.91
MRPL55Q7Z7F7 AC079841.1-201ENST00000481228 950 ntBASIC3.1□□□□□ -1.91
MRPL55Q7Z7F7 VPS26A-206ENST00000489794 928 ntTSL 3 BASIC3.1□□□□□ -1.91
MRPL55Q7Z7F7 AC072052.1-201ENST00000496556 306 ntBASIC3.1□□□□□ -1.91
MRPL55Q7Z7F7 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC3.1□□□□□ -1.91
MRPL55Q7Z7F7 HIGD1AP14-201ENST00000507617 282 ntBASIC3.1□□□□□ -1.91
MRPL55Q7Z7F7 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC3.1□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms