Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 AC123769.1-201ENST00000530992 3192 ntBASIC6.33□□□□□ -1.4
RNF43Q68DV7 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
RNF43Q68DV7 AL355488.2-201ENST00000609909 2850 ntBASIC6.33□□□□□ -1.4
RNF43Q68DV7 AC079753.1-201ENST00000623243 3868 ntBASIC6.33□□□□□ -1.4
RNF43Q68DV7 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.33□□□□□ -1.4
RNF43Q68DV7 AC008627.1-201ENST00000517511 1704 ntBASIC6.33□□□□□ -1.4
RNF43Q68DV7 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
RNF43Q68DV7 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.33□□□□□ -1.4
RNF43Q68DV7 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
RNF43Q68DV7 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.33□□□□□ -1.4
RNF43Q68DV7 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
RNF43Q68DV7 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
RNF43Q68DV7 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RNF43Q68DV7 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RNF43Q68DV7 RBMY1HP-201ENST00000382759 1389 ntBASIC6.32□□□□□ -1.4
RNF43Q68DV7 HDAC1P2-201ENST00000453661 1398 ntBASIC6.32□□□□□ -1.4
RNF43Q68DV7 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RNF43Q68DV7 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC6.32□□□□□ -1.4
RNF43Q68DV7 AP002833.3-201ENST00000625075 2265 ntBASIC6.32□□□□□ -1.4
RNF43Q68DV7 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RNF43Q68DV7 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RNF43Q68DV7 SNORA51.2-201ENST00000364595 132 ntBASIC6.32□□□□□ -1.4
RNF43Q68DV7 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
RNF43Q68DV7 TRPM3-206ENST00000377097 554 ntTSL 2 BASIC6.32□□□□□ -1.4
RNF43Q68DV7 Y_RNA.431-201ENST00000384086 102 ntBASIC6.32□□□□□ -1.4
RNF43Q68DV7 RNU6-1122P-201ENST00000384449 107 ntBASIC6.32□□□□□ -1.4
RNF43Q68DV7 MIR433-201ENST00000384837 93 ntBASIC6.32□□□□□ -1.4
RNF43Q68DV7 U3.25-201ENST00000391209 220 ntBASIC6.32□□□□□ -1.4
RNF43Q68DV7 ATP5HP3-201ENST00000396994 486 ntBASIC6.32□□□□□ -1.4
RNF43Q68DV7 AF178030.1-201ENST00000415088 402 ntTSL 2 BASIC6.32□□□□□ -1.4
RNF43Q68DV7 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC6.32□□□□□ -1.4
RNF43Q68DV7 AL035410.1-201ENST00000427409 427 ntBASIC6.32□□□□□ -1.4
RNF43Q68DV7 AL358934.1-201ENST00000432346 324 ntBASIC6.32□□□□□ -1.4
RNF43Q68DV7 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC6.32□□□□□ -1.4
RNF43Q68DV7 OR52B5P-201ENST00000435337 951 ntBASIC6.32□□□□□ -1.4
RNF43Q68DV7 REG1CP-206ENST00000447469 496 ntBASIC6.32□□□□□ -1.4
RNF43Q68DV7 AL157827.1-201ENST00000447622 132 ntBASIC6.32□□□□□ -1.4
RNF43Q68DV7 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC6.32□□□□□ -1.4
RNF43Q68DV7 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC6.32□□□□□ -1.4
RNF43Q68DV7 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC6.32□□□□□ -1.4
RNF43Q68DV7 AC023141.9-201ENST00000458734 412 ntBASIC6.32□□□□□ -1.4
RNF43Q68DV7 RPL39P36-201ENST00000490784 156 ntBASIC6.32□□□□□ -1.4
RNF43Q68DV7 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC6.32□□□□□ -1.4
RNF43Q68DV7 AL136038.1-201ENST00000497246 351 ntBASIC6.32□□□□□ -1.4
RNF43Q68DV7 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC6.32□□□□□ -1.4
RNF43Q68DV7 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RNF43Q68DV7 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC6.32□□□□□ -1.4
RNF43Q68DV7 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.32□□□□□ -1.4
RNF43Q68DV7 snoU109.5-201ENST00000516231 132 ntBASIC6.32□□□□□ -1.4
RNF43Q68DV7 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC6.32□□□□□ -1.4
RNF43Q68DV7 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC6.32□□□□□ -1.4
RNF43Q68DV7 AC087276.1-201ENST00000529659 480 ntBASIC6.32□□□□□ -1.4
RNF43Q68DV7 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
RNF43Q68DV7 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC6.32□□□□□ -1.4
RNF43Q68DV7 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC6.32□□□□□ -1.4
RNF43Q68DV7 AC020661.2-201ENST00000560114 134 ntBASIC6.32□□□□□ -1.4
RNF43Q68DV7 NPM1P42-201ENST00000560329 862 ntBASIC6.32□□□□□ -1.4
RNF43Q68DV7 NIFKP8-201ENST00000560500 874 ntBASIC6.32□□□□□ -1.4
RNF43Q68DV7 AC026470.2-201ENST00000561492 181 ntBASIC6.32□□□□□ -1.4
RNF43Q68DV7 RBM22P12-201ENST00000567098 1255 ntBASIC6.32□□□□□ -1.4
RNF43Q68DV7 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC6.32□□□□□ -1.4
RNF43Q68DV7 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC6.32□□□□□ -1.4
RNF43Q68DV7 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC6.32□□□□□ -1.4
RNF43Q68DV7 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC6.32□□□□□ -1.4
RNF43Q68DV7 AP001506.1-201ENST00000615444 211 ntBASIC6.32□□□□□ -1.4
RNF43Q68DV7 AC011815.3-201ENST00000624194 473 ntBASIC6.32□□□□□ -1.4
RNF43Q68DV7 AC116667.2-201ENST00000641075 823 ntBASIC6.32□□□□□ -1.4
RNF43Q68DV7 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.32□□□□□ -1.4
RNF43Q68DV7 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.32□□□□□ -1.4
RNF43Q68DV7 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
RNF43Q68DV7 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RNF43Q68DV7 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC6.32□□□□□ -1.4
RNF43Q68DV7 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC6.32□□□□□ -1.4
RNF43Q68DV7 DAB2-209ENST00000509337 2740 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
RNF43Q68DV7 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.32□□□□□ -1.4
RNF43Q68DV7 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
RNF43Q68DV7 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
RNF43Q68DV7 CDH7-201ENST00000323011 2728 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RNF43Q68DV7 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
RNF43Q68DV7 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
RNF43Q68DV7 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
RNF43Q68DV7 AC010132.2-201ENST00000295493 1043 ntBASIC6.31□□□□□ -1.4
RNF43Q68DV7 RNA5SP477-201ENST00000362639 119 ntBASIC6.31□□□□□ -1.4
RNF43Q68DV7 Y_RNA.67-201ENST00000362870 100 ntBASIC6.31□□□□□ -1.4
RNF43Q68DV7 Y_RNA.72-201ENST00000362894 103 ntBASIC6.31□□□□□ -1.4
RNF43Q68DV7 MIR937-201ENST00000401271 86 ntBASIC6.31□□□□□ -1.4
RNF43Q68DV7 AC245096.1-201ENST00000413104 546 ntBASIC6.31□□□□□ -1.4
RNF43Q68DV7 GAS5-202ENST00000414075 413 ntTSL 2 BASIC6.31□□□□□ -1.4
RNF43Q68DV7 PDCL2P1-201ENST00000419302 352 ntBASIC6.31□□□□□ -1.4
RNF43Q68DV7 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC6.31□□□□□ -1.4
RNF43Q68DV7 AL356583.2-201ENST00000426536 280 ntBASIC6.31□□□□□ -1.4
RNF43Q68DV7 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC6.31□□□□□ -1.4
RNF43Q68DV7 AL831737.1-201ENST00000441288 271 ntBASIC6.31□□□□□ -1.4
RNF43Q68DV7 AC064871.1-201ENST00000444562 427 ntTSL 3 BASIC6.31□□□□□ -1.4
RNF43Q68DV7 HMGN1P36-201ENST00000446623 298 ntBASIC6.31□□□□□ -1.4
RNF43Q68DV7 AC233279.1-201ENST00000455300 423 ntBASIC6.31□□□□□ -1.4
RNF43Q68DV7 RPS26P39-201ENST00000469206 341 ntBASIC6.31□□□□□ -1.4
RNF43Q68DV7 DYNLL1P6-201ENST00000503440 264 ntBASIC6.31□□□□□ -1.4
RNF43Q68DV7 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC6.31□□□□□ -1.4
RNF43Q68DV7 HMGB1P29-201ENST00000505659 499 ntBASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 72.7 ms