Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC5.1□□□□□ -1.59
RNF220Q5VTB9 VDAC1P6-201ENST00000430062 855 ntBASIC5.1□□□□□ -1.59
RNF220Q5VTB9 RPS25P9-201ENST00000435591 252 ntBASIC5.1□□□□□ -1.59
RNF220Q5VTB9 MTND2P20-201ENST00000440805 661 ntBASIC5.1□□□□□ -1.59
RNF220Q5VTB9 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC5.1□□□□□ -1.59
RNF220Q5VTB9 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
RNF220Q5VTB9 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC5.1□□□□□ -1.59
RNF220Q5VTB9 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC5.1□□□□□ -1.59
RNF220Q5VTB9 APOOP2-201ENST00000461561 539 ntBASIC5.1□□□□□ -1.59
RNF220Q5VTB9 AC010301.1-201ENST00000473936 355 ntBASIC5.1□□□□□ -1.59
RNF220Q5VTB9 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC5.1□□□□□ -1.59
RNF220Q5VTB9 RN7SL447P-201ENST00000494711 245 ntBASIC5.1□□□□□ -1.59
RNF220Q5VTB9 AC147055.4-201ENST00000504399 745 ntBASIC5.1□□□□□ -1.59
RNF220Q5VTB9 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.1□□□□□ -1.59
RNF220Q5VTB9 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC5.1□□□□□ -1.59
RNF220Q5VTB9 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.1□□□□□ -1.59
RNF220Q5VTB9 TRIM51DP-201ENST00000529746 596 ntBASIC5.1□□□□□ -1.59
RNF220Q5VTB9 SLC2A13P1-201ENST00000531560 322 ntBASIC5.1□□□□□ -1.59
RNF220Q5VTB9 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC5.1□□□□□ -1.59
RNF220Q5VTB9 AC090022.1-201ENST00000546569 311 ntBASIC5.1□□□□□ -1.59
RNF220Q5VTB9 AC090502.2-201ENST00000549267 280 ntBASIC5.1□□□□□ -1.59
RNF220Q5VTB9 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RNF220Q5VTB9 GNG2-208ENST00000554875 430 ntTSL 5 BASIC5.1□□□□□ -1.59
RNF220Q5VTB9 LINS1-214ENST00000561308 1612 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RNF220Q5VTB9 MTND4P34-201ENST00000572715 1371 ntBASIC5.1□□□□□ -1.59
RNF220Q5VTB9 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC5.1□□□□□ -1.59
RNF220Q5VTB9 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC5.1□□□□□ -1.59
RNF220Q5VTB9 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC5.1□□□□□ -1.59
RNF220Q5VTB9 AL138895.2-201ENST00000603019 178 ntBASIC5.1□□□□□ -1.59
RNF220Q5VTB9 AC005252.1-201ENST00000604518 1063 ntBASIC5.1□□□□□ -1.59
RNF220Q5VTB9 AC069304.2-201ENST00000605154 435 ntBASIC5.1□□□□□ -1.59
RNF220Q5VTB9 AC112220.3-201ENST00000605502 502 ntBASIC5.1□□□□□ -1.59
RNF220Q5VTB9 AC090948.2-201ENST00000607363 564 ntBASIC5.1□□□□□ -1.59
RNF220Q5VTB9 AC116651.1-201ENST00000609724 556 ntBASIC5.1□□□□□ -1.59
RNF220Q5VTB9 AC005962.2-201ENST00000611427 652 ntBASIC5.1□□□□□ -1.59
RNF220Q5VTB9 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC5.1□□□□□ -1.59
RNF220Q5VTB9 AL136981.2-201ENST00000617319 734 ntBASIC5.1□□□□□ -1.59
RNF220Q5VTB9 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
RNF220Q5VTB9 CCL14-204ENST00000622526 472 ntTSL 3 BASIC5.1□□□□□ -1.59
RNF220Q5VTB9 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC5.1□□□□□ -1.59
RNF220Q5VTB9 BCLAF1-201ENST00000353331 7110 ntTSL 5 BASIC5.1□□□□□ -1.59
RNF220Q5VTB9 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
RNF220Q5VTB9 Z95331.1-201ENST00000623075 23112 ntBASIC5.1□□□□□ -1.59
RNF220Q5VTB9 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
RNF220Q5VTB9 AC000123.3-201ENST00000624029 4975 ntBASIC5.09□□□□□ -1.59
RNF220Q5VTB9 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RNF220Q5VTB9 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
RNF220Q5VTB9 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
RNF220Q5VTB9 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RNF220Q5VTB9 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
RNF220Q5VTB9 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
RNF220Q5VTB9 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC5.09□□□□□ -1.59
RNF220Q5VTB9 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.09□□□□□ -1.59
RNF220Q5VTB9 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RNF220Q5VTB9 ZNF37BP-203ENST00000452306 1352 ntBASIC5.09□□□□□ -1.59
RNF220Q5VTB9 AL391994.1-201ENST00000254724 282 ntBASIC5.09□□□□□ -1.59
RNF220Q5VTB9 OR4A15-201ENST00000314706 1035 ntBASIC5.09□□□□□ -1.59
RNF220Q5VTB9 RNA5SP394-201ENST00000364216 119 ntBASIC5.09□□□□□ -1.59
RNF220Q5VTB9 RNU4-4P-201ENST00000364588 130 ntBASIC5.09□□□□□ -1.59
RNF220Q5VTB9 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.09□□□□□ -1.59
RNF220Q5VTB9 MANSC4-201ENST00000381273 1023 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
RNF220Q5VTB9 RNU6-921P-201ENST00000384361 107 ntBASIC5.09□□□□□ -1.59
RNF220Q5VTB9 MIR649-201ENST00000384843 97 ntBASIC5.09□□□□□ -1.59
RNF220Q5VTB9 OR7E156P-201ENST00000400303 464 ntBASIC5.09□□□□□ -1.59
RNF220Q5VTB9 AL589647.1-201ENST00000402485 466 ntBASIC5.09□□□□□ -1.59
RNF220Q5VTB9 VN1R12P-201ENST00000403778 876 ntBASIC5.09□□□□□ -1.59
RNF220Q5VTB9 AC099535.1-201ENST00000408928 371 ntBASIC5.09□□□□□ -1.59
RNF220Q5VTB9 RNU2-28P-201ENST00000410457 189 ntBASIC5.09□□□□□ -1.59
RNF220Q5VTB9 RPSAP35-201ENST00000413753 818 ntBASIC5.09□□□□□ -1.59
RNF220Q5VTB9 AL365338.1-201ENST00000422282 858 ntBASIC5.09□□□□□ -1.59
RNF220Q5VTB9 AL022400.1-201ENST00000423946 935 ntBASIC5.09□□□□□ -1.59
RNF220Q5VTB9 SDCBPP2-201ENST00000424643 885 ntBASIC5.09□□□□□ -1.59
RNF220Q5VTB9 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
RNF220Q5VTB9 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC5.09□□□□□ -1.59
RNF220Q5VTB9 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC5.09□□□□□ -1.59
RNF220Q5VTB9 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC5.09□□□□□ -1.59
RNF220Q5VTB9 AL031584.1-201ENST00000447169 754 ntBASIC5.09□□□□□ -1.59
RNF220Q5VTB9 MTCO1P48-201ENST00000448024 1096 ntBASIC5.09□□□□□ -1.59
RNF220Q5VTB9 MTND2P19-201ENST00000449129 1012 ntBASIC5.09□□□□□ -1.59
RNF220Q5VTB9 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC5.09□□□□□ -1.59
RNF220Q5VTB9 AL591623.2-201ENST00000449978 222 ntBASIC5.09□□□□□ -1.59
RNF220Q5VTB9 ZNF736P5Y-201ENST00000451173 805 ntBASIC5.09□□□□□ -1.59
RNF220Q5VTB9 AL445665.1-202ENST00000452436 324 ntBASIC5.09□□□□□ -1.59
RNF220Q5VTB9 MTCO3P11-201ENST00000455103 774 ntBASIC5.09□□□□□ -1.59
RNF220Q5VTB9 AC010468.1-201ENST00000461022 817 ntBASIC5.09□□□□□ -1.59
RNF220Q5VTB9 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC5.09□□□□□ -1.59
RNF220Q5VTB9 OR2A1-AS1-202ENST00000467944 422 ntBASIC5.09□□□□□ -1.59
RNF220Q5VTB9 AP000797.2-201ENST00000475768 606 ntBASIC5.09□□□□□ -1.59
RNF220Q5VTB9 MTATP6P22-201ENST00000507369 598 ntBASIC5.09□□□□□ -1.59
RNF220Q5VTB9 AC110792.2-201ENST00000510278 224 ntBASIC5.09□□□□□ -1.59
RNF220Q5VTB9 AC018797.3-201ENST00000513388 1241 ntBASIC5.09□□□□□ -1.59
RNF220Q5VTB9 AC104619.2-201ENST00000514293 646 ntTSL 3 BASIC5.09□□□□□ -1.59
RNF220Q5VTB9 MYLK-AS2-202ENST00000515464 754 ntTSL 2 BASIC5.09□□□□□ -1.59
RNF220Q5VTB9 RN7SKP70-201ENST00000516655 271 ntBASIC5.09□□□□□ -1.59
RNF220Q5VTB9 RNU6-232P-201ENST00000517144 64 ntBASIC5.09□□□□□ -1.59
RNF220Q5VTB9 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.09□□□□□ -1.59
RNF220Q5VTB9 NPM1P6-201ENST00000521088 871 ntBASIC5.09□□□□□ -1.59
RNF220Q5VTB9 MINCR-206ENST00000524335 499 ntTSL 2 BASIC5.09□□□□□ -1.59
RNF220Q5VTB9 NAP1L1P1-201ENST00000524793 1063 ntBASIC5.09□□□□□ -1.59
RNF220Q5VTB9 PTH-202ENST00000529816 799 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms