Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
CCDC58Q4VC31 AL513478.4-201ENST00000641636 310 ntBASIC3.67□□□□□ -1.82
CCDC58Q4VC31 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CCDC58Q4VC31 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
CCDC58Q4VC31 SEPT7P7-201ENST00000420492 1301 ntBASIC3.67□□□□□ -1.82
CCDC58Q4VC31 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.67□□□□□ -1.82
CCDC58Q4VC31 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC58Q4VC31 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC58Q4VC31 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC58Q4VC31 FAS-205ENST00000357339 1044 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC58Q4VC31 MTHFD2P2-201ENST00000407725 247 ntBASIC3.66□□□□□ -1.82
CCDC58Q4VC31 GTF3AP1-201ENST00000416942 1004 ntBASIC3.66□□□□□ -1.82
CCDC58Q4VC31 AL356387.2-201ENST00000422272 243 ntBASIC3.66□□□□□ -1.82
CCDC58Q4VC31 AC073069.1-201ENST00000428657 441 ntBASIC3.66□□□□□ -1.82
CCDC58Q4VC31 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC3.66□□□□□ -1.82
CCDC58Q4VC31 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.66□□□□□ -1.82
CCDC58Q4VC31 TEX41-205ENST00000431734 529 ntTSL 4 BASIC3.66□□□□□ -1.82
CCDC58Q4VC31 AC011998.1-201ENST00000433403 117 ntBASIC3.66□□□□□ -1.82
CCDC58Q4VC31 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC3.66□□□□□ -1.82
CCDC58Q4VC31 AL627308.1-201ENST00000435693 821 ntBASIC3.66□□□□□ -1.82
CCDC58Q4VC31 RPL23AP46-201ENST00000438548 490 ntBASIC3.66□□□□□ -1.82
CCDC58Q4VC31 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.66□□□□□ -1.82
CCDC58Q4VC31 SERPINA7P1-201ENST00000443077 631 ntBASIC3.66□□□□□ -1.82
CCDC58Q4VC31 MTND6P32-201ENST00000457611 483 ntBASIC3.66□□□□□ -1.82
CCDC58Q4VC31 AC096741.1-201ENST00000472250 846 ntBASIC3.66□□□□□ -1.82
CCDC58Q4VC31 RPL23AP72-201ENST00000492447 435 ntBASIC3.66□□□□□ -1.82
CCDC58Q4VC31 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC3.66□□□□□ -1.82
CCDC58Q4VC31 APPL2-203ENST00000546731 684 ntTSL 2 BASIC3.66□□□□□ -1.82
CCDC58Q4VC31 AL121839.1-201ENST00000556233 1185 ntBASIC3.66□□□□□ -1.82
CCDC58Q4VC31 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC3.66□□□□□ -1.82
CCDC58Q4VC31 AC133644.2-201ENST00000608142 540 ntBASIC3.66□□□□□ -1.82
CCDC58Q4VC31 AL096803.3-201ENST00000609032 532 ntBASIC3.66□□□□□ -1.82
CCDC58Q4VC31 FAM27D1-201ENST00000612308 341 ntBASIC3.66□□□□□ -1.82
CCDC58Q4VC31 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC3.66□□□□□ -1.82
CCDC58Q4VC31 MIR8058-201ENST00000615737 89 ntBASIC3.66□□□□□ -1.82
CCDC58Q4VC31 AC009318.3-201ENST00000616916 503 ntBASIC3.66□□□□□ -1.82
CCDC58Q4VC31 AC095038.2-201ENST00000621464 1070 ntBASIC3.66□□□□□ -1.82
CCDC58Q4VC31 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC3.66□□□□□ -1.82
CCDC58Q4VC31 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC3.66□□□□□ -1.82
CCDC58Q4VC31 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.66□□□□□ -1.82
CCDC58Q4VC31 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC58Q4VC31 AL592148.3-201ENST00000608771 2646 ntBASIC3.66□□□□□ -1.82
CCDC58Q4VC31 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CCDC58Q4VC31 AC109780.1-201ENST00000451768 1344 ntBASIC3.66□□□□□ -1.82
CCDC58Q4VC31 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.82
CCDC58Q4VC31 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC3.65□□□□□ -1.82
CCDC58Q4VC31 AC015813.6-201ENST00000624409 5808 ntBASIC3.65□□□□□ -1.82
CCDC58Q4VC31 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.82
CCDC58Q4VC31 IPO8P1-201ENST00000455509 3109 ntBASIC3.65□□□□□ -1.82
CCDC58Q4VC31 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.82
CCDC58Q4VC31 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
CCDC58Q4VC31 DHX40P1-201ENST00000588725 1412 ntBASIC3.65□□□□□ -1.83
CCDC58Q4VC31 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
CCDC58Q4VC31 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
CCDC58Q4VC31 HMGN2P8-201ENST00000391458 268 ntBASIC3.65□□□□□ -1.83
CCDC58Q4VC31 AL645927.1-201ENST00000396783 406 ntBASIC3.65□□□□□ -1.83
CCDC58Q4VC31 RPS12P23-201ENST00000419579 400 ntBASIC3.65□□□□□ -1.83
CCDC58Q4VC31 AC104837.2-201ENST00000427236 424 ntBASIC3.65□□□□□ -1.83
CCDC58Q4VC31 RPL23AP52-201ENST00000439311 478 ntBASIC3.65□□□□□ -1.83
CCDC58Q4VC31 TXNP1-201ENST00000441872 371 ntBASIC3.65□□□□□ -1.83
CCDC58Q4VC31 PPIAP20-201ENST00000449839 135 ntBASIC3.65□□□□□ -1.83
CCDC58Q4VC31 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.65□□□□□ -1.83
CCDC58Q4VC31 TVP23BP2-201ENST00000455082 615 ntBASIC3.65□□□□□ -1.83
CCDC58Q4VC31 RPS20P4-201ENST00000461659 355 ntBASIC3.65□□□□□ -1.83
CCDC58Q4VC31 RN7SL738P-201ENST00000470264 297 ntBASIC3.65□□□□□ -1.83
CCDC58Q4VC31 AC117430.1-201ENST00000474711 801 ntTSL 5 BASIC3.65□□□□□ -1.83
CCDC58Q4VC31 TMED11P-201ENST00000479478 690 ntBASIC3.65□□□□□ -1.83
CCDC58Q4VC31 AC026784.1-201ENST00000507986 352 ntBASIC3.65□□□□□ -1.83
CCDC58Q4VC31 NDUFB5P1-201ENST00000508134 564 ntBASIC3.65□□□□□ -1.83
CCDC58Q4VC31 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.65□□□□□ -1.83
CCDC58Q4VC31 GNRHR2P1-201ENST00000555315 631 ntBASIC3.65□□□□□ -1.83
CCDC58Q4VC31 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.65□□□□□ -1.83
CCDC58Q4VC31 AP000255.1-201ENST00000610276 676 ntBASIC3.65□□□□□ -1.83
CCDC58Q4VC31 AC021106.3-201ENST00000623925 531 ntBASIC3.65□□□□□ -1.83
CCDC58Q4VC31 AP000843.1-201ENST00000624880 701 ntBASIC3.65□□□□□ -1.83
CCDC58Q4VC31 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
CCDC58Q4VC31 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CCDC58Q4VC31 ZNF826P-207ENST00000622273 1910 ntBASIC3.65□□□□□ -1.83
CCDC58Q4VC31 CR788268.1-201ENST00000603931 1809 ntBASIC3.65□□□□□ -1.83
CCDC58Q4VC31 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC3.65□□□□□ -1.83
CCDC58Q4VC31 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.65□□□□□ -1.83
CCDC58Q4VC31 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC58Q4VC31 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC58Q4VC31 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
CCDC58Q4VC31 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
CCDC58Q4VC31 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.64□□□□□ -1.83
CCDC58Q4VC31 RNU1-14P-201ENST00000362759 152 ntBASIC3.64□□□□□ -1.83
CCDC58Q4VC31 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC58Q4VC31 CCL7-202ENST00000394627 696 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC58Q4VC31 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.64□□□□□ -1.83
CCDC58Q4VC31 AL590704.1-201ENST00000402856 794 ntBASIC3.64□□□□□ -1.83
CCDC58Q4VC31 AC007390.1-201ENST00000415722 356 ntBASIC3.64□□□□□ -1.83
CCDC58Q4VC31 P2RY10P2-201ENST00000416730 913 ntBASIC3.64□□□□□ -1.83
CCDC58Q4VC31 AC079760.2-203ENST00000418395 489 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC58Q4VC31 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC58Q4VC31 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC58Q4VC31 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.64□□□□□ -1.83
CCDC58Q4VC31 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC3.64□□□□□ -1.83
CCDC58Q4VC31 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.64□□□□□ -1.83
CCDC58Q4VC31 VN1R96P-201ENST00000446052 858 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 126 ms