Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 STXBP4-204ENST00000434978 2807 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
RPL39P62891 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
RPL39P62891 RIOK3P1-201ENST00000418778 1528 ntBASIC2.62□□□□□ -1.99
RPL39P62891 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC2.62□□□□□ -1.99
RPL39P62891 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
RPL39P62891 MLF1-208ENST00000478894 1372 ntTSL 2 BASIC2.61□□□□□ -1.99
RPL39P62891 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC2.61□□□□□ -1.99
RPL39P62891 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC2.61□□□□□ -1.99
RPL39P62891 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
RPL39P62891 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC2.61□□□□□ -1.99
RPL39P62891 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
RPL39P62891 RN7SKP224-201ENST00000364140 325 ntBASIC2.61□□□□□ -1.99
RPL39P62891 RNA5SP235-201ENST00000365411 114 ntBASIC2.61□□□□□ -1.99
RPL39P62891 RNU6-398P-201ENST00000384143 109 ntBASIC2.61□□□□□ -1.99
RPL39P62891 ENSAP1-201ENST00000392855 326 ntBASIC2.61□□□□□ -1.99
RPL39P62891 RPS26P8-201ENST00000393490 348 ntBASIC2.61□□□□□ -1.99
RPL39P62891 RPS27AP11-201ENST00000402798 447 ntBASIC2.61□□□□□ -1.99
RPL39P62891 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC2.61□□□□□ -1.99
RPL39P62891 ZNF736P2Y-201ENST00000416040 1279 ntBASIC2.61□□□□□ -1.99
RPL39P62891 AL590139.1-201ENST00000416267 400 ntBASIC2.61□□□□□ -1.99
RPL39P62891 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC2.61□□□□□ -1.99
RPL39P62891 RPL12P34-201ENST00000424532 479 ntBASIC2.61□□□□□ -1.99
RPL39P62891 HMGB1P32-201ENST00000425971 565 ntBASIC2.61□□□□□ -1.99
RPL39P62891 AC006455.6-201ENST00000426192 893 ntBASIC2.61□□□□□ -1.99
RPL39P62891 AL732292.1-201ENST00000426692 226 ntBASIC2.61□□□□□ -1.99
RPL39P62891 AC006989.1-201ENST00000427212 131 ntBASIC2.61□□□□□ -1.99
RPL39P62891 AL158071.1-201ENST00000430315 461 ntBASIC2.61□□□□□ -1.99
RPL39P62891 AL356276.2-201ENST00000435919 558 ntBASIC2.61□□□□□ -1.99
RPL39P62891 FCF1P3-201ENST00000496394 590 ntBASIC2.61□□□□□ -1.99
RPL39P62891 AC083829.1-201ENST00000503756 657 ntBASIC2.61□□□□□ -1.99
RPL39P62891 IL7R-208ENST00000511982 612 ntTSL 2 BASIC2.61□□□□□ -1.99
RPL39P62891 AC018797.3-201ENST00000513388 1241 ntBASIC2.61□□□□□ -1.99
RPL39P62891 RFESD-208ENST00000513950 464 ntTSL 5 BASIC2.61□□□□□ -1.99
RPL39P62891 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC2.61□□□□□ -1.99
RPL39P62891 OR5AN2P-201ENST00000534535 896 ntBASIC2.61□□□□□ -1.99
RPL39P62891 SPTY2D1-AS1-203ENST00000542172 331 ntAPPRIS ALT2 TSL 1 (best) BASIC2.61□□□□□ -1.99
RPL39P62891 TRAV15-201ENST00000556680 249 ntBASIC2.61□□□□□ -1.99
RPL39P62891 AC006960.3-201ENST00000561845 705 ntBASIC2.61□□□□□ -1.99
RPL39P62891 RN7SL600P-201ENST00000581811 299 ntBASIC2.61□□□□□ -1.99
RPL39P62891 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC2.61□□□□□ -1.99
RPL39P62891 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC2.61□□□□□ -1.99
RPL39P62891 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC2.61□□□□□ -1.99
RPL39P62891 AL163642.2-201ENST00000604722 1019 ntBASIC2.61□□□□□ -1.99
RPL39P62891 AC100827.5-201ENST00000615883 426 ntBASIC2.61□□□□□ -1.99
RPL39P62891 AC011944.2-201ENST00000624440 683 ntBASIC2.61□□□□□ -1.99
RPL39P62891 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC2.61□□□□□ -1.99
RPL39P62891 WDR75-207ENST00000631047 270 ntTSL 5 BASIC2.61□□□□□ -1.99
RPL39P62891 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC2.61□□□□□ -1.99
RPL39P62891 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC2.61□□□□□ -1.99
RPL39P62891 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
RPL39P62891 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
RPL39P62891 MTCO1P15-201ENST00000529569 1526 ntBASIC2.61□□□□□ -1.99
RPL39P62891 SPATA2P1-201ENST00000431223 2055 ntBASIC2.61□□□□□ -1.99
RPL39P62891 ECT2-204ENST00000392692 4158 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
RPL39P62891 CASC19-261ENST00000641853 1638 ntBASIC2.6□□□□□ -1.99
RPL39P62891 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
RPL39P62891 AC073429.2-201ENST00000569694 1444 ntBASIC2.6□□□□□ -1.99
RPL39P62891 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
RPL39P62891 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
RPL39P62891 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
RPL39P62891 OR56A4-201ENST00000330728 1209 ntBASIC2.6□□□□□ -1.99
RPL39P62891 RNA5SP97-201ENST00000365006 84 ntBASIC2.6□□□□□ -1.99
RPL39P62891 MIR3074-201ENST00000384885 81 ntBASIC2.6□□□□□ -1.99
RPL39P62891 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC2.6□□□□□ -1.99
RPL39P62891 AL590704.1-201ENST00000402856 794 ntBASIC2.6□□□□□ -1.99
RPL39P62891 RPL6P21-201ENST00000418672 846 ntBASIC2.6□□□□□ -1.99
RPL39P62891 COX6CP15-201ENST00000426313 211 ntBASIC2.6□□□□□ -1.99
RPL39P62891 MRPL50P1-201ENST00000431951 384 ntBASIC2.6□□□□□ -1.99
RPL39P62891 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
RPL39P62891 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC2.6□□□□□ -1.99
RPL39P62891 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
RPL39P62891 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC2.6□□□□□ -1.99
RPL39P62891 TXNP1-201ENST00000441872 371 ntBASIC2.6□□□□□ -1.99
RPL39P62891 AC006480.1-201ENST00000449887 378 ntBASIC2.6□□□□□ -1.99
RPL39P62891 AC099563.1-201ENST00000456086 418 ntBASIC2.6□□□□□ -1.99
RPL39P62891 RPS3AP6-201ENST00000484430 795 ntBASIC2.6□□□□□ -1.99
RPL39P62891 ACTG1P13-201ENST00000486987 1043 ntBASIC2.6□□□□□ -1.99
RPL39P62891 AC110792.1-201ENST00000491826 472 ntBASIC2.6□□□□□ -1.99
RPL39P62891 AC091167.1-201ENST00000492017 396 ntBASIC2.6□□□□□ -1.99
RPL39P62891 NIPA2P2-201ENST00000496376 1083 ntBASIC2.6□□□□□ -1.99
RPL39P62891 AC008638.1-201ENST00000506035 866 ntBASIC2.6□□□□□ -1.99
RPL39P62891 NDUFB4P12-201ENST00000513465 390 ntBASIC2.6□□□□□ -1.99
RPL39P62891 RN7SKP60-201ENST00000516985 239 ntBASIC2.6□□□□□ -1.99
RPL39P62891 MTCYBP19-201ENST00000517463 1124 ntBASIC2.6□□□□□ -1.99
RPL39P62891 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC2.6□□□□□ -1.99
RPL39P62891 AC138701.1-201ENST00000524329 714 ntBASIC2.6□□□□□ -1.99
RPL39P62891 AL139174.1-201ENST00000531489 886 ntBASIC2.6□□□□□ -1.99
RPL39P62891 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC2.6□□□□□ -1.99
RPL39P62891 AC008011.1-201ENST00000545989 227 ntBASIC2.6□□□□□ -1.99
RPL39P62891 AC009101.1-201ENST00000568135 242 ntBASIC2.6□□□□□ -1.99
RPL39P62891 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC2.6□□□□□ -1.99
RPL39P62891 LINC01028-202ENST00000588782 458 ntTSL 3 BASIC2.6□□□□□ -1.99
RPL39P62891 AC244505.7-201ENST00000599675 272 ntBASIC2.6□□□□□ -1.99
RPL39P62891 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC2.6□□□□□ -1.99
RPL39P62891 SNORA62.6-201ENST00000606322 83 ntBASIC2.6□□□□□ -1.99
RPL39P62891 AL391261.4-201ENST00000616012 481 ntBASIC2.6□□□□□ -1.99
RPL39P62891 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
RPL39P62891 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC2.6□□□□□ -1.99
RPL39P62891 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC2.6□□□□□ -1.99
RPL39P62891 SAGE2P-201ENST00000420011 2126 ntBASIC2.6□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms