Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 GTF3AP5-201ENST00000442645 697 ntBASIC5.25□□□□□ -1.57
COPAP53621 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.25□□□□□ -1.57
COPAP53621 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.25□□□□□ -1.57
COPAP53621 IFNWP4-201ENST00000453148 294 ntBASIC5.25□□□□□ -1.57
COPAP53621 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC5.25□□□□□ -1.57
COPAP53621 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC5.25□□□□□ -1.57
COPAP53621 snoU13.20-201ENST00000459180 104 ntBASIC5.25□□□□□ -1.57
COPAP53621 RPL23AP71-201ENST00000470966 469 ntBASIC5.25□□□□□ -1.57
COPAP53621 AP000563.1-201ENST00000490865 758 ntBASIC5.25□□□□□ -1.57
COPAP53621 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.25□□□□□ -1.57
COPAP53621 AC091951.3-201ENST00000504093 246 ntBASIC5.25□□□□□ -1.57
COPAP53621 AC034244.1-201ENST00000507687 207 ntBASIC5.25□□□□□ -1.57
COPAP53621 AC118282.2-201ENST00000508739 374 ntBASIC5.25□□□□□ -1.57
COPAP53621 AC118465.1-201ENST00000513820 1271 ntBASIC5.25□□□□□ -1.57
COPAP53621 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC5.25□□□□□ -1.57
COPAP53621 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC5.25□□□□□ -1.57
COPAP53621 VNN2-207ENST00000525289 900 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
COPAP53621 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC5.25□□□□□ -1.57
COPAP53621 AC090695.1-201ENST00000561269 1222 ntBASIC5.25□□□□□ -1.57
COPAP53621 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.25□□□□□ -1.57
COPAP53621 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC5.25□□□□□ -1.57
COPAP53621 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.25□□□□□ -1.57
COPAP53621 AC022884.2-201ENST00000578535 580 ntBASIC5.25□□□□□ -1.57
COPAP53621 MIR4691-201ENST00000583764 85 ntBASIC5.25□□□□□ -1.57
COPAP53621 AP001269.3-201ENST00000588718 329 ntBASIC5.25□□□□□ -1.57
COPAP53621 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.25□□□□□ -1.57
COPAP53621 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC5.25□□□□□ -1.57
COPAP53621 AL162431.4-201ENST00000604674 411 ntBASIC5.25□□□□□ -1.57
COPAP53621 AC114878.2-201ENST00000604863 1251 ntBASIC5.25□□□□□ -1.57
COPAP53621 EIF3FP1-201ENST00000613970 806 ntBASIC5.25□□□□□ -1.57
COPAP53621 MIR6839-201ENST00000620425 113 ntBASIC5.25□□□□□ -1.57
COPAP53621 AC091905.4-201ENST00000623432 202 ntBASIC5.25□□□□□ -1.57
COPAP53621 AC244517.5-203ENST00000624778 517 ntTSL 2 BASIC5.25□□□□□ -1.57
COPAP53621 AC009303.2-205ENST00000627670 1091 ntTSL 5 BASIC5.25□□□□□ -1.57
COPAP53621 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
COPAP53621 ERVW-1-201ENST00000493463 2925 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
COPAP53621 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.25□□□□□ -1.57
COPAP53621 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC5.25□□□□□ -1.57
COPAP53621 GABRG2-202ENST00000361925 3767 ntTSL 3 BASIC5.25□□□□□ -1.57
COPAP53621 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.24□□□□□ -1.57
COPAP53621 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
COPAP53621 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.24□□□□□ -1.57
COPAP53621 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
COPAP53621 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
COPAP53621 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
COPAP53621 MTUS1-201ENST00000262102 6160 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
COPAP53621 OR9G4-201ENST00000302957 984 ntBASIC5.24□□□□□ -1.57
COPAP53621 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
COPAP53621 RN7SKP115-201ENST00000363177 317 ntBASIC5.24□□□□□ -1.57
COPAP53621 RNA5SP455-201ENST00000365190 119 ntBASIC5.24□□□□□ -1.57
COPAP53621 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
COPAP53621 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
COPAP53621 SNORA40.2-201ENST00000390847 128 ntBASIC5.24□□□□□ -1.57
COPAP53621 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC5.24□□□□□ -1.57
COPAP53621 GSTM3P2-201ENST00000412746 530 ntBASIC5.24□□□□□ -1.57
COPAP53621 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC5.24□□□□□ -1.57
COPAP53621 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.24□□□□□ -1.57
COPAP53621 AL049745.1-201ENST00000433953 286 ntBASIC5.24□□□□□ -1.57
COPAP53621 RPS29P10-201ENST00000439197 166 ntBASIC5.24□□□□□ -1.57
COPAP53621 SETD6P1-201ENST00000444575 317 ntBASIC5.24□□□□□ -1.57
COPAP53621 KNOP1P3-201ENST00000446933 426 ntBASIC5.24□□□□□ -1.57
COPAP53621 AC115989.1-202ENST00000452153 1150 ntTSL 2 BASIC5.24□□□□□ -1.57
COPAP53621 MRPL42P4-201ENST00000453267 443 ntBASIC5.24□□□□□ -1.57
COPAP53621 AC083982.1-201ENST00000485679 344 ntBASIC5.24□□□□□ -1.57
COPAP53621 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.24□□□□□ -1.57
COPAP53621 AC005912.1-201ENST00000495392 255 ntBASIC5.24□□□□□ -1.57
COPAP53621 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC5.24□□□□□ -1.57
COPAP53621 AC084024.2-201ENST00000503480 791 ntBASIC5.24□□□□□ -1.57
COPAP53621 LINC02231-201ENST00000510459 447 ntTSL 3 BASIC5.24□□□□□ -1.57
COPAP53621 AC010285.3-201ENST00000511668 676 ntBASIC5.24□□□□□ -1.57
COPAP53621 UBE2Q2P10-201ENST00000514854 900 ntBASIC5.24□□□□□ -1.57
COPAP53621 AC067817.1-201ENST00000518535 356 ntTSL 2 BASIC5.24□□□□□ -1.57
COPAP53621 COX6B1P6-201ENST00000522347 255 ntBASIC5.24□□□□□ -1.57
COPAP53621 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC5.24□□□□□ -1.57
COPAP53621 AC091515.1-201ENST00000548110 679 ntBASIC5.24□□□□□ -1.57
COPAP53621 PCNPP1-201ENST00000552501 511 ntBASIC5.24□□□□□ -1.57
COPAP53621 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC5.24□□□□□ -1.57
COPAP53621 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC5.24□□□□□ -1.57
COPAP53621 HNRNPCP4-201ENST00000571636 900 ntBASIC5.24□□□□□ -1.57
COPAP53621 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC5.24□□□□□ -1.57
COPAP53621 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC5.24□□□□□ -1.57
COPAP53621 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC5.24□□□□□ -1.57
COPAP53621 AC078883.4-201ENST00000623218 367 ntBASIC5.24□□□□□ -1.57
COPAP53621 AC112694.2-201ENST00000623697 768 ntBASIC5.24□□□□□ -1.57
COPAP53621 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
COPAP53621 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
COPAP53621 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.24□□□□□ -1.57
COPAP53621 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
COPAP53621 AC012321.1-201ENST00000561622 1588 ntBASIC5.24□□□□□ -1.57
COPAP53621 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
COPAP53621 RGS4-202ENST00000367908 2606 ntTSL 2 BASIC5.24□□□□□ -1.57
COPAP53621 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
COPAP53621 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
COPAP53621 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
COPAP53621 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.23□□□□□ -1.57
COPAP53621 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.23□□□□□ -1.57
COPAP53621 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.23□□□□□ -1.57
COPAP53621 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
COPAP53621 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
COPAP53621 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms