Protein–RNA interactions for Protein: P48061

CXCL12, Stromal cell-derived factor 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12P48061 OR8I1P-201ENST00000529291 931 ntBASIC4.06□□□□□ -1.76
CXCL12P48061 AC093014.1-201ENST00000548926 724 ntBASIC4.06□□□□□ -1.76
CXCL12P48061 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC4.06□□□□□ -1.76
CXCL12P48061 MTND2P17-201ENST00000550281 688 ntBASIC4.06□□□□□ -1.76
CXCL12P48061 AC100844.1-201ENST00000580622 440 ntTSL 5 BASIC4.06□□□□□ -1.76
CXCL12P48061 AL137072.1-201ENST00000603444 466 ntBASIC4.06□□□□□ -1.76
CXCL12P48061 AC007342.8-201ENST00000623278 678 ntBASIC4.06□□□□□ -1.76
CXCL12P48061 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.06□□□□□ -1.76
CXCL12P48061 TOPORSLP1-201ENST00000467693 2102 ntBASIC4.06□□□□□ -1.76
CXCL12P48061 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
CXCL12P48061 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
CXCL12P48061 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CXCL12P48061 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CXCL12P48061 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.05□□□□□ -1.76
CXCL12P48061 ERCC6-202ENST00000374127 1782 ntBASIC4.05□□□□□ -1.76
CXCL12P48061 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.05□□□□□ -1.76
CXCL12P48061 AL513548.1-201ENST00000562904 1724 ntBASIC4.05□□□□□ -1.76
CXCL12P48061 U8.11-201ENST00000384699 133 ntBASIC4.05□□□□□ -1.76
CXCL12P48061 U8.12-201ENST00000384701 133 ntBASIC4.05□□□□□ -1.76
CXCL12P48061 VDAC1P9-201ENST00000412766 841 ntBASIC4.05□□□□□ -1.76
CXCL12P48061 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.05□□□□□ -1.76
CXCL12P48061 HMGN2P31-201ENST00000432430 273 ntBASIC4.05□□□□□ -1.76
CXCL12P48061 LBX1-AS1-202ENST00000434878 418 ntTSL 5 BASIC4.05□□□□□ -1.76
CXCL12P48061 AC012594.1-271ENST00000438635 736 ntTSL 3 BASIC4.05□□□□□ -1.76
CXCL12P48061 AL353748.1-201ENST00000440753 474 ntBASIC4.05□□□□□ -1.76
CXCL12P48061 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC4.05□□□□□ -1.76
CXCL12P48061 U8.18-201ENST00000459285 133 ntBASIC4.05□□□□□ -1.76
CXCL12P48061 PANCR-201ENST00000503456 493 ntTSL 5 BASIC4.05□□□□□ -1.76
CXCL12P48061 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.05□□□□□ -1.76
CXCL12P48061 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CXCL12P48061 AC026427.2-201ENST00000506228 536 ntBASIC4.05□□□□□ -1.76
CXCL12P48061 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC4.05□□□□□ -1.76
CXCL12P48061 HMGN1P11-201ENST00000508668 303 ntBASIC4.05□□□□□ -1.76
CXCL12P48061 RNU6-943P-201ENST00000516960 98 ntBASIC4.05□□□□□ -1.76
CXCL12P48061 LINC00534-201ENST00000517400 793 ntTSL 2 BASIC4.05□□□□□ -1.76
CXCL12P48061 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.05□□□□□ -1.76
CXCL12P48061 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC4.05□□□□□ -1.76
CXCL12P48061 AC073172.2-201ENST00000527770 571 ntTSL 4 BASIC4.05□□□□□ -1.76
CXCL12P48061 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.05□□□□□ -1.76
CXCL12P48061 AC027176.2-201ENST00000559166 746 ntBASIC4.05□□□□□ -1.76
CXCL12P48061 MIR3200-201ENST00000580767 85 ntBASIC4.05□□□□□ -1.76
CXCL12P48061 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.05□□□□□ -1.76
CXCL12P48061 AC016957.2-201ENST00000616998 848 ntBASIC4.05□□□□□ -1.76
CXCL12P48061 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
CXCL12P48061 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CXCL12P48061 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.05□□□□□ -1.76
CXCL12P48061 CASC19-204ENST00000641001 2055 ntBASIC4.05□□□□□ -1.76
CXCL12P48061 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
CXCL12P48061 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
CXCL12P48061 MTUS1-228ENST00000544260 3650 ntTSL 2 BASIC4.05□□□□□ -1.76
CXCL12P48061 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.04□□□□□ -1.76
CXCL12P48061 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.04□□□□□ -1.76
CXCL12P48061 AC010132.3-201ENST00000442788 2430 ntAPPRIS P5 TSL 5 BASIC4.04□□□□□ -1.76
CXCL12P48061 AL606537.1-201ENST00000607258 2011 ntBASIC4.04□□□□□ -1.76
CXCL12P48061 AC000123.3-201ENST00000624029 4975 ntBASIC4.04□□□□□ -1.76
CXCL12P48061 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
CXCL12P48061 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC4.04□□□□□ -1.76
CXCL12P48061 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC4.04□□□□□ -1.76
CXCL12P48061 PTMAP5-201ENST00000393073 333 ntBASIC4.04□□□□□ -1.76
CXCL12P48061 CDKN3-203ENST00000395577 637 ntTSL 5 BASIC4.04□□□□□ -1.76
CXCL12P48061 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC4.04□□□□□ -1.76
CXCL12P48061 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CXCL12P48061 MTND2P15-201ENST00000418575 892 ntBASIC4.04□□□□□ -1.76
CXCL12P48061 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CXCL12P48061 AL358472.1-201ENST00000431295 329 ntBASIC4.04□□□□□ -1.76
CXCL12P48061 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.04□□□□□ -1.76
CXCL12P48061 TH2LCRR-202ENST00000435042 472 ntTSL 5 BASIC4.04□□□□□ -1.76
CXCL12P48061 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CXCL12P48061 PRDX3P3-201ENST00000447765 522 ntBASIC4.04□□□□□ -1.76
CXCL12P48061 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CXCL12P48061 ABCF2P2-201ENST00000450549 296 ntBASIC4.04□□□□□ -1.76
CXCL12P48061 PLGLA-201ENST00000465668 449 ntBASIC4.04□□□□□ -1.76
CXCL12P48061 PPIAP15-201ENST00000479662 484 ntBASIC4.04□□□□□ -1.76
CXCL12P48061 TRBV8-1-201ENST00000481590 279 ntBASIC4.04□□□□□ -1.76
CXCL12P48061 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC4.04□□□□□ -1.76
CXCL12P48061 AC090013.1-201ENST00000485147 480 ntBASIC4.04□□□□□ -1.76
CXCL12P48061 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC4.04□□□□□ -1.76
CXCL12P48061 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.04□□□□□ -1.76
CXCL12P48061 RNA5SP179-201ENST00000517284 121 ntBASIC4.04□□□□□ -1.76
CXCL12P48061 SOD1P3-201ENST00000518682 454 ntBASIC4.04□□□□□ -1.76
CXCL12P48061 IGKV2D-19-201ENST00000523346 262 ntBASIC4.04□□□□□ -1.76
CXCL12P48061 PHBP17-201ENST00000528576 541 ntBASIC4.04□□□□□ -1.76
CXCL12P48061 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CXCL12P48061 AC063950.1-201ENST00000552036 308 ntBASIC4.04□□□□□ -1.76
CXCL12P48061 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.04□□□□□ -1.76
CXCL12P48061 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.04□□□□□ -1.76
CXCL12P48061 AF131215.7-201ENST00000602443 707 ntBASIC4.04□□□□□ -1.76
CXCL12P48061 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.04□□□□□ -1.76
CXCL12P48061 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC4.04□□□□□ -1.76
CXCL12P48061 AC026368.1-201ENST00000614934 690 ntBASIC4.04□□□□□ -1.76
CXCL12P48061 AC090246.1-201ENST00000616499 426 ntBASIC4.04□□□□□ -1.76
CXCL12P48061 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.04□□□□□ -1.76
CXCL12P48061 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.04□□□□□ -1.76
CXCL12P48061 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC4.04□□□□□ -1.76
CXCL12P48061 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
CXCL12P48061 TNFAIP6-201ENST00000243347 1424 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CXCL12P48061 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
CXCL12P48061 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CXCL12P48061 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.03□□□□□ -1.76
CXCL12P48061 AL672167.1-204ENST00000641875 3017 ntBASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 141.6 ms